Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- golgi 2
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH35738 | Soybean | endoplasmic reticulum | 92.16 | 92.16 |
| VIT_03s0180g00170.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 67.16 | 66.18 |
| PGSC0003DMT400066222 | Potato | plasma membrane | 62.25 | 62.25 |
| Solyc01g107620.2.1 | Tomato | plasma membrane | 62.25 | 57.99 |
| Os04t0670000-01 | Rice | plasma membrane | 52.45 | 53.77 |
| GSMUA_Achr7P05440_001 | Banana | peroxisome, plasma membrane, vacuole | 57.84 | 52.91 |
| Zm00001d026575_P001 | Maize | mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 50.49 | 52.02 |
| Zm00001d001901_P002 | Maize | plasma membrane | 50.49 | 52.02 |
| EES11624 | Sorghum | plasma membrane | 50.0 | 51.52 |
| AT2G15280.1 | Thale cress | plasma membrane | 50.49 | 51.24 |
| TraesCS2A01G544000.1 | Wheat | plasma membrane | 47.55 | 48.74 |
| Bra040612.1-P | Field mustard | plasma membrane | 43.63 | 48.63 |
| CDX71213 | Canola | plasma membrane | 47.55 | 47.78 |
| CDY48222 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 47.06 | 47.29 |
| TraesCS2D01G545200.1 | Wheat | plasma membrane | 44.61 | 45.96 |
| TraesCS2B01G574200.2 | Wheat | plasma membrane | 44.61 | 45.73 |
| GSMUA_Achr4P20190_001 | Banana | cytosol, plastid | 58.82 | 42.55 |
| KRH66004 | Soybean | endoplasmic reticulum, golgi, plasma membrane | 41.18 | 40.19 |
| KRH75801 | Soybean | plasma membrane | 41.18 | 40.19 |
| KRG93546 | Soybean | plasma membrane | 38.24 | 39.2 |
| KRH18469 | Soybean | plasma membrane | 36.76 | 37.88 |
| HORVU2Hr1G122310.2 | Barley | cytosol, plasma membrane | 32.35 | 35.48 |
| KRH45979 | Soybean | cytosol, nucleus, plasma membrane | 39.71 | 33.33 |
| KRH59988 | Soybean | mitochondrion | 41.18 | 33.07 |
| KRH41254 | Soybean | cytosol, nucleus, plasma membrane | 40.69 | 32.68 |
| KRH14529 | Soybean | cytosol, peroxisome, plasma membrane | 38.73 | 32.24 |
| KRH35899 | Soybean | plasma membrane | 32.84 | 31.6 |
| KRH35223 | Soybean | cytosol, nucleus, plasma membrane | 38.24 | 31.2 |
| KRG99174 | Soybean | endoplasmic reticulum, plasma membrane | 13.24 | 31.03 |
| KRH73588 | Soybean | plasma membrane | 37.25 | 31.02 |
| KRH06560 | Soybean | endoplasmic reticulum | 38.73 | 30.86 |
| KRG99024 | Soybean | plasma membrane | 39.71 | 30.68 |
| KRH76938 | Soybean | endoplasmic reticulum, plasma membrane | 24.02 | 30.43 |
| KRH40357 | Soybean | endoplasmic reticulum | 38.24 | 30.35 |
| KRH00872 | Soybean | endoplasmic reticulum | 38.24 | 30.12 |
| KRH39144 | Soybean | plasma membrane | 31.86 | 29.28 |
| KRH48561 | Soybean | plasma membrane | 30.88 | 28.38 |
| KRH28521 | Soybean | endoplasmic reticulum | 29.41 | 28.3 |
| KRH48008 | Soybean | cytosol, peroxisome, plasma membrane | 40.69 | 26.43 |
| KRG91601 | Soybean | mitochondrion | 37.25 | 22.35 |
| KRH30696 | Soybean | plasma membrane | 25.0 | 20.73 |
Protein Annotations
| MapMan:13.7.2.1 | EMBL:ACUP02012660 | EnsemblPlantsGene:GLYMA_20G128900 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0016020 | GO:GO:0016021 | UniProt:I1NFX2 |
| InterPro:IPR003388 | EnsemblPlants:KRG91024 | ProteinID:KRG91024 | ProteinID:KRG91024.1 | PFAM:PF02453 | PFscan:PS50845 |
| PANTHER:PTHR10994 | PANTHER:PTHR10994:SF125 | InterPro:Reticulon | TMHMM:TMhelix | UniParc:UPI000233DC98 | SEG:seg |
Description
hypothetical protein
Coordinates
chr20:+:37032344..37034935
Molecular Weight (calculated)
22876.4 Da
IEP (calculated)
9.574
GRAVY (calculated)
0.569
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDSNRISVH RVLGEGLVAD VVLWKNWRGA VAVLVSATTL WYLFERAGYN FLSFVANVVL LLVAILFFWA KAANLLNRPL PPLPDLEISE ETIARVADAL
101: QIWLNRALSV AHDIAIERNL LLCLQVVGVL WVISYIGSLF NFLTLIYIGV LLSLSLPVLY DKYQDQVDGR LGVIHGVIQT QYKKIHSIVL SKIPKLSNKE
201: KKVQ
101: QIWLNRALSV AHDIAIERNL LLCLQVVGVL WVISYIGSLF NFLTLIYIGV LLSLSLPVLY DKYQDQVDGR LGVIHGVIQT QYKKIHSIVL SKIPKLSNKE
201: KKVQ
001: MGDSVSSSSR VSVHQSLGAG SVADLLLWRN RTGAVILLIS STGFWFLFER AGYNLLSFVS NVLLLLVAIF FLWAKSATVL NRPLPPVPNM EIPEEFANKA
101: ADDLRVWINY VLSIASDITI ARNPIRLLQV SLVLWAISYV GTLINSLTLV YIGVLLSLSF PIVYEKYQDH IDEKVNSTSK FVRNISRKFP LPINKEKKHQ
101: ADDLRVWINY VLSIASDITI ARNPIRLLQV SLVLWAISYV GTLINSLTLV YIGVLLSLSF PIVYEKYQDH IDEKVNSTSK FVRNISRKFP LPINKEKKHQ
Arabidopsis Description
Reticulon-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LL94]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.