Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- golgi 2
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400078544 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 41.98 | 57.79 |
Solyc05g008890.2.1 | Tomato | plasma membrane | 55.19 | 52.94 |
GSMUA_Achr2P07230_001 | Banana | golgi, plasma membrane, vacuole | 45.28 | 45.71 |
KXG33168 | Sorghum | golgi, peroxisome, plasma membrane | 44.81 | 43.98 |
GSMUA_Achr8P31770_001 | Banana | peroxisome | 46.23 | 43.95 |
KRH48561 | Soybean | plasma membrane | 45.75 | 43.69 |
KRH39144 | Soybean | plasma membrane | 45.75 | 43.69 |
CDX96038 | Canola | plasma membrane | 43.4 | 43.6 |
Bra004291.1-P | Field mustard | plasma membrane | 42.92 | 43.13 |
AT1G68230.2 | Thale cress | plasma membrane | 43.4 | 42.79 |
CDX81500 | Canola | plasma membrane | 41.98 | 42.79 |
CDY01898 | Canola | plasma membrane | 42.45 | 42.45 |
Zm00001d011631_P001 | Maize | golgi, peroxisome, plasma membrane | 42.92 | 41.18 |
Os01t0139000-00 | Rice | plasma membrane | 41.04 | 40.85 |
Os01t0691400-00 | Rice | cytosol, peroxisome | 44.34 | 40.69 |
EES19907 | Sorghum | cytosol, peroxisome, plasma membrane | 42.92 | 40.27 |
TraesCS3B01G294700.1 | Wheat | plasma membrane | 41.51 | 40.18 |
TraesCS1D01G380400.1 | Wheat | cytosol, peroxisome, plasma membrane | 44.34 | 40.17 |
TraesCS1B01G393700.1 | Wheat | cytosol, peroxisome, plasma membrane | 43.87 | 39.74 |
TraesCS1A01G373800.1 | Wheat | cytosol, peroxisome, plasma membrane | 43.87 | 39.74 |
TraesCS3A01G261500.1 | Wheat | plasma membrane | 41.04 | 39.73 |
Zm00001d038910_P001 | Maize | plasma membrane | 42.45 | 39.65 |
HORVU3Hr1G064240.2 | Barley | plasma membrane | 39.62 | 38.36 |
EES02516 | Sorghum | peroxisome, plastid | 38.68 | 37.61 |
TraesCS3D01G050800.1 | Wheat | mitochondrion | 38.68 | 35.04 |
KRG99174 | Soybean | endoplasmic reticulum, plasma membrane | 14.15 | 34.48 |
TraesCS3B01G060400.1 | Wheat | mitochondrion | 37.74 | 33.76 |
KRH45979 | Soybean | cytosol, nucleus, plasma membrane | 38.68 | 33.74 |
KRH41254 | Soybean | cytosol, nucleus, plasma membrane | 40.09 | 33.46 |
KRH59988 | Soybean | mitochondrion | 40.09 | 33.46 |
KRH00872 | Soybean | endoplasmic reticulum | 40.57 | 33.2 |
Zm00001d008590_P001 | Maize | plastid | 20.75 | 33.08 |
KRH14529 | Soybean | cytosol, peroxisome, plasma membrane | 38.21 | 33.06 |
KRG91024 | Soybean | plasma membrane | 31.6 | 32.84 |
KRH40357 | Soybean | endoplasmic reticulum | 39.62 | 32.68 |
KRG99024 | Soybean | plasma membrane | 40.09 | 32.2 |
KRH73588 | Soybean | plasma membrane | 36.79 | 31.84 |
KRH06560 | Soybean | endoplasmic reticulum | 38.21 | 31.64 |
CDY12701 | Canola | plasma membrane | 44.34 | 31.13 |
KRH75801 | Soybean | plasma membrane | 30.66 | 31.1 |
KRH66004 | Soybean | endoplasmic reticulum, golgi, plasma membrane | 30.66 | 31.1 |
KRH35738 | Soybean | endoplasmic reticulum | 29.72 | 30.88 |
Bra033951.1-P | Field mustard | plasma membrane | 43.87 | 30.79 |
HORVU1Hr1G083110.3 | Barley | plastid | 41.98 | 30.48 |
VIT_01s0011g04030.t01 | Wine grape | cytosol | 52.83 | 29.95 |
KRG93546 | Soybean | plasma membrane | 27.36 | 29.15 |
KRH35223 | Soybean | cytosol, nucleus, plasma membrane | 33.96 | 28.8 |
KRH18469 | Soybean | plasma membrane | 26.42 | 28.28 |
GSMUA_AchrUn_... | Banana | golgi | 43.4 | 26.14 |
KRH48008 | Soybean | cytosol, peroxisome, plasma membrane | 38.68 | 26.11 |
TraesCS3A01G051200.1 | Wheat | cytosol | 37.26 | 23.94 |
KRH76938 | Soybean | endoplasmic reticulum, plasma membrane | 17.92 | 23.6 |
HORVU3Hr1G008400.1 | Barley | cytosol, peroxisome | 37.74 | 22.99 |
KRH28521 | Soybean | endoplasmic reticulum | 21.7 | 21.7 |
KRG91601 | Soybean | mitochondrion | 33.96 | 21.18 |
KRH30696 | Soybean | plasma membrane | 24.53 | 21.14 |
Protein Annotations
EntrezGene:100306402 | MapMan:13.7.2.1 | EMBL:ACUP02006706 | EMBL:BT090482 | UniProt:C6SZ82 | EnsemblPlantsGene:GLYMA_10G270900 |
GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 |
GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR003388 | EnsemblPlants:KRH35899 | ProteinID:KRH35899 | ProteinID:KRH35899.1 |
PFAM:PF02453 | PFscan:PS50845 | PANTHER:PTHR10994 | PANTHER:PTHR10994:SF85 | InterPro:Reticulon | TMHMM:TMhelix |
UniParc:UPI0001B14F2F | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:-:49315690..49317405
Molecular Weight (calculated)
24751.9 Da
IEP (calculated)
9.757
GRAVY (calculated)
0.341
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MPIRSRETAQ RPGLLDRQRP LHAVLGGGKL ADILLWKDKI LSAAMVAGFS IIWFLFEVVE YNFLTLLCHI LMAVMLILFV WYNAAGLITW NLPQIYDFQI
101: PEPTFRFLFQ KLNSFLRRFY DISTGKDLTL FFVTIACLWI LSAIGNYFTT LNLLYIMFLC LVTLPIMYER YEYEVNYLAS KGNQDVQRLF NTLDTKVLTK
201: IPRGPVKEKK KK
101: PEPTFRFLFQ KLNSFLRRFY DISTGKDLTL FFVTIACLWI LSAIGNYFTT LNLLYIMFLC LVTLPIMYER YEYEVNYLAS KGNQDVQRLF NTLDTKVLTK
201: IPRGPVKEKK KK
001: MPIFTGSSSD SEDERTIHKT TKLFTRQRSI HSIFGGGKVA DILLWREPKI AATLVIGVSI LWFLMEVVEY NFITLICHAS MTSMLFFFIW STASDFLNWE
101: RPLIPEVVLD ESSFKQLARS FHVRFNQILT KLLDVACGRD PPLFFLTTIS LYIVSIIGTY FNFVNLLFIG FVSMQTLPVM YEMYEDDVDT AAGKLMRKMK
201: KLYKKVDTNV LSKIPRGTVK NKKFT
101: RPLIPEVVLD ESSFKQLARS FHVRFNQILT KLLDVACGRD PPLFFLTTIS LYIVSIIGTY FNFVNLLFIG FVSMQTLPVM YEMYEDDVDT AAGKLMRKMK
201: KLYKKVDTNV LSKIPRGTVK NKKFT
Arabidopsis Description
RTNLB9Reticulon-like protein B9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJQ5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.