Factsheet for Os01t0691400-00

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G261500.1	Wheat	plasma membrane	73.59	77.63
KXG33168	Sorghum	golgi, peroxisome, plasma membrane	72.29	77.31
TraesCS3B01G294700.1	Wheat	plasma membrane	73.16	77.17
HORVU3Hr1G064240.2	Barley	plasma membrane	72.29	76.26
Zm00001d011631_P001	Maize	golgi, peroxisome, plasma membrane	70.13	73.3
GSMUA_Achr8P31770_001	Banana	peroxisome	51.08	52.91
GSMUA_Achr2P07230_001	Banana	golgi, plasma membrane, vacuole	44.59	49.05
PGSC0003DMT400078544	Potato	endoplasmic reticulum, plasma membrane, vacuole	31.6	47.4
VIT_17s0000g03260.t01	Wine grape	plasma membrane	42.86	46.7
KRH48561	Soybean	plasma membrane	43.72	45.5
Solyc05g008890.2.1	Tomato	plasma membrane	42.86	44.8
KRH39144	Soybean	plasma membrane	42.86	44.59
KRH35899	Soybean	plasma membrane	40.69	44.34
Os01t0139000-00	Rice	plasma membrane	39.83	43.19
Os01t0226300-01	Rice	plasma membrane	32.9	42.7
CDY66516	Canola	endoplasmic reticulum, extracellular	34.2	42.47
CDY67571	Canola	plasma membrane	41.13	42.41
CDY51936	Canola	endoplasmic reticulum, peroxisome, plasma membrane	40.69	41.96
CDX75962	Canola	plasma membrane	40.69	41.96
Solyc03g119190.2.1	Tomato	plasma membrane	39.39	41.55
Bra037594.1-P	Field mustard	plasma membrane	40.26	41.52
AT3G18260.1	Thale cress	plasma membrane	39.83	40.89
PGSC0003DMT400014404	Potato	cytosol, plasma membrane, vacuole	16.45	40.43
AT1G68230.2	Thale cress	plasma membrane	34.2	36.74
CDX81500	Canola	plasma membrane	32.9	36.54
Os05t0526400-01	Rice	plasma membrane	38.96	35.86
Os01t0736900-01	Rice	plasma membrane	38.96	35.57
Os02t0265900-01	Rice	cytosol, peroxisome, plasma membrane	35.06	35.22
Bra004291.1-P	Field mustard	plasma membrane	32.03	35.07
CDX96038	Canola	plasma membrane	32.03	35.07
CDY01898	Canola	plasma membrane	31.6	34.43
GSMUA_AchrUn_...	Banana	golgi	49.78	32.67
Os07t0142000-01	Rice	plasma membrane	33.77	31.71
Os05t0312500-01	Rice	plasma membrane	34.2	31.47
Os06t0503400-01	Rice	plasma membrane	35.93	31.32
Os03t0781700-01	Rice	cytosol, peroxisome, plasma membrane	33.33	31.17
Os04t0670000-01	Rice	plasma membrane	26.41	30.65
Os03t0336600-02	Rice	plasma membrane	29.0	29.0
Os04t0367400-02	Rice	plasma membrane	26.41	28.64
Os01t0851300-01	Rice	golgi, plasma membrane, vacuole	25.11	28.57
VIT_01s0011g04030.t01	Wine grape	cytosol	45.89	28.34
Bra033951.1-P	Field mustard	plasma membrane	32.9	25.17
CDY12701	Canola	plasma membrane	32.9	25.17

Protein Annotations

EnsemblPlants:Os01t0691400-00	EnsemblPlantsGene:Os01g0691400	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0005789	GO:GO:0016020	GO:GO:0016021	InterPro:IPR003388	InterPro:Reticulon
PANTHER:PTHR10994	PANTHER:PTHR10994:SF81	PFAM:PF02453	PFscan:PS50845	ProteinID:BAS73806.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI000393BE29	UniProt:A0A0P0V6T9	MapMan:13.7.2.1	:	:

Description

Similar to seed maturation protein. (Os01t0691400-00)

Coordinates

chr1:+:28539955..28541359

Molecular Weight (calculated)

25959.1 Da

IEP (calculated)

9.639

GRAVY (calculated)

0.205

Length

231 amino acids

Sequence
(BLAST)

001: QRNIPHTYTH EAMPPHFPRD SDSDQNVRMP FHGHKSIHKL LGGGQVADIL LWKNRNLSAG VLAGATLIWF LFDVVEYNII PLLCQIAILA MLVIFIWSNA
101: APLLDRAPPR IPEIIISEHA FREMALTVHY KLTYTVSVLY DIACGKDLKR FLLVVGSLLV LSAIGSSCSL TSLLYIGFLC AHTLPVLYQR YKTEVDHLVA
201: KGSDDIKKFY KKVDSNLLNK IPRGPVKTKV K

Best Arabidopsis Sequence Match ( AT3G18260.1 )
(BLAST)

001: MPIFTGSSSD SEDERTIHKT TKLFTRQRSI HSIFGGGKVA DILLWREPKI AATLVIGVSI LWFLMEVVEY NFITLICHAS MTSMLFFFIW STASDFLNWE
101: RPLIPEVVLD ESSFKQLARS FHVRFNQILT KLLDVACGRD PPLFFLTTIS LYIVSIIGTY FNFVNLLFIG FVSMQTLPVM YEMYEDDVDT AAGKLMRKMK
201: KLYKKVDTNV LSKIPRGTVK NKKFT

Arabidopsis Description

RTNLB9Reticulon-like protein B9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJQ5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.