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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • plasma membrane 5
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
EpiLoc:plasma membrane
MultiLoc:golgi
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX96038 Canola plasma membrane 99.53 99.53
AT1G68230.2 Thale cress plasma membrane 84.83 83.26
Bra033951.1-P Field mustard plasma membrane 88.15 61.59
PGSC0003DMT400078544 Potato endoplasmic reticulum, plasma membrane, vacuole 32.23 44.16
KRH35899 Soybean plasma membrane 43.13 42.92
Solyc05g008890.2.1 Tomato plasma membrane 44.08 42.08
GSMUA_Achr2P07230_001 Banana golgi, plasma membrane, vacuole 35.07 35.24
Os01t0139000-00 Rice plasma membrane 34.6 34.27
EES02516 Sorghum peroxisome, plastid 35.07 33.95
Bra037594.1-P Field mustard plasma membrane 36.02 33.93
KXG33168 Sorghum golgi, peroxisome, plasma membrane 34.6 33.8
EES19907 Sorghum cytosol, peroxisome, plasma membrane 35.07 32.74
TraesCS3D01G050800.1 Wheat mitochondrion 36.02 32.48
TraesCS3B01G294700.1 Wheat plasma membrane 33.65 32.42
Os01t0691400-00 Rice cytosol, peroxisome 35.07 32.03
TraesCS3A01G261500.1 Wheat plasma membrane 32.7 31.51
GSMUA_Achr8P31770_001 Banana peroxisome 33.18 31.39
TraesCS3B01G060400.1 Wheat mitochondrion 35.07 31.22
Zm00001d011631_P001 Maize golgi, peroxisome, plasma membrane 32.7 31.22
Bra003455.1-P Field mustard cytosol, peroxisome, plasma membrane 37.44 31.1
HORVU3Hr1G064240.2 Barley plasma membrane 32.23 31.05
Zm00001d038910_P001 Maize plasma membrane 33.18 30.84
Bra004562.1-P Field mustard cytosol, peroxisome, plasma membrane 34.6 29.08
Bra003171.1-P Field mustard plasma membrane 27.01 28.08
TraesCS1B01G393700.1 Wheat cytosol, peroxisome, plasma membrane 30.81 27.78
TraesCS1A01G373800.1 Wheat cytosol, peroxisome, plasma membrane 30.81 27.78
TraesCS1D01G380400.1 Wheat cytosol, peroxisome, plasma membrane 30.33 27.35
Bra000739.1-P Field mustard cytosol 34.6 27.34
Bra027757.1-P Field mustard cytosol, endoplasmic reticulum, peroxisome 31.75 26.8
Zm00001d008590_P001 Maize plastid 16.59 26.32
Bra040612.1-P Field mustard plasma membrane 22.75 26.23
Bra019285.1-P Field mustard cytosol 33.18 26.12
Bra001748.1-P Field mustard plastid 24.17 26.02
Bra013717.1-P Field mustard nucleus 33.65 25.72
Bra010539.1-P Field mustard cytosol 32.7 25.65
Bra037369.1-P Field mustard cytosol 29.38 25.51
Bra027678.1-P Field mustard cytosol, endoplasmic reticulum, nucleus 30.33 25.5
Bra007047.1-P Field mustard golgi, plasma membrane, vacuole 24.17 24.88
VIT_01s0011g04030.t01 Wine grape cytosol 43.6 24.6
Bra029827.1-P Field mustard plasma membrane 27.49 24.27
Bra034153.1-P Field mustard plasma membrane 25.12 23.77
Bra029878.1-P Field mustard cytosol, peroxisome, plasma membrane 26.54 23.43
TraesCS3A01G051200.1 Wheat cytosol 35.55 22.73
GSMUA_AchrUn_... Banana golgi 36.49 21.88
HORVU1Hr1G083110.3 Barley plastid 29.86 21.58
Bra022426.1-P Field mustard cytosol, plasma membrane, plastid 24.64 21.31
HORVU3Hr1G008400.1 Barley cytosol, peroxisome 35.07 21.26
Bra039207.1-P Field mustard plasma membrane 20.38 20.67
Bra035242.1-P Field mustard cytosol 17.54 18.5
Protein Annotations
EnsemblPlants:Bra004291.1EnsemblPlants:Bra004291.1-PEnsemblPlantsGene:Bra004291GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0016020GO:GO:0016021InterPro:IPR003388
InterPro:ReticulonPANTHER:PTHR10994PANTHER:PTHR10994:SF124PFAM:PF02453PFscan:PS50845SEG:seg
TMHMM:TMhelixUniParc:UPI0002541736UniProt:M4CJA7MapMan:13.7.2.1::
Description
AT1G68230 (E=1e-057) | reticulon family protein (RTNLB14)
Coordinates
chrA07:+:17812858..17813823
Molecular Weight (calculated)
24560.3 Da
IEP (calculated)
9.902
GRAVY (calculated)
0.277
Length
211 amino acids
Sequence
(BLAST)
001: MAINGYEYGA SSRKRRSLYH NLGGGHFADI MFWKNKKESG TILAVFTLIW FLFEVVEYPF ITFLCQILLI SIFIFFIWSY IGSSQLIKRR PPSIDDLKIS
101: ESTWRLLFDK INWFIIKLYD VSSGTDFRLL VLAVVSLWIL SVVGNYFSSL TLLYIVFVGL ETIPMLYELY EEELNYAASK SGMNMKKLFD NFNSKVINKI
201: PKATGKTKRR M
Best Arabidopsis Sequence Match ( AT1G68230.2 )
(BLAST)
001: MAVFGYEMDE HRASSSRRRR SLYHNLGGGR FADIMFWKNK KESGTILGVF TLIWFLFEVV EYPFITFLCQ ILLLFIFIFL IWSYIGSSQL IQSKPPSIND
101: LRISESNWRF LFNKINWFII KLYDISSGKD FRLLFLAVVS LWILSVVGNY FSSLTLLYIV FVGLETIPML YEQYEEELTY AASKSGRDMK KLLNKFNSKV
201: INKIPKAQAK TRRTM
Arabidopsis Description
RTNLB14Reticulon-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178WQE6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.