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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, secretory
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES19907 Sorghum cytosol, peroxisome, plasma membrane 85.46 85.84
TraesCS1B01G393700.1 Wheat cytosol, peroxisome, plasma membrane 72.25 70.09
TraesCS1D01G380400.1 Wheat cytosol, peroxisome, plasma membrane 71.81 69.66
TraesCS1A01G373800.1 Wheat cytosol, peroxisome, plasma membrane 71.37 69.23
Zm00001d011631_P001 Maize golgi, peroxisome, plasma membrane 57.27 58.82
GSMUA_Achr8P31770_001 Banana peroxisome 51.54 52.47
HORVU1Hr1G083110.3 Barley plastid 67.4 52.4
GSMUA_Achr2P07230_001 Banana golgi, plasma membrane, vacuole 46.26 50.0
PGSC0003DMT400078544 Potato endoplasmic reticulum, plasma membrane, vacuole 31.28 46.1
VIT_17s0000g03260.t01 Wine grape plasma membrane 42.73 45.75
CDY66516 Canola endoplasmic reticulum, extracellular 35.24 43.01
Solyc05g008890.2.1 Tomato plasma membrane 41.41 42.53
Solyc03g119190.2.1 Tomato plasma membrane 40.97 42.47
KRH35899 Soybean plasma membrane 39.65 42.45
KRH39144 Soybean plasma membrane 40.09 40.99
KRH48561 Soybean plasma membrane 40.09 40.99
CDX75962 Canola plasma membrane 40.09 40.62
CDY67571 Canola plasma membrane 39.65 40.18
CDY51936 Canola endoplasmic reticulum, peroxisome, plasma membrane 39.65 40.18
AT3G18260.1 Thale cress plasma membrane 39.65 40.0
Bra037594.1-P Field mustard plasma membrane 39.21 39.73
PGSC0003DMT400014404 Potato cytosol, plasma membrane, vacuole 16.3 39.36
Zm00001d043551_P003 Maize plasma membrane 41.41 36.58
Zm00001d012776_P001 Maize extracellular 40.09 35.97
Zm00001d038768_P001 Maize extracellular, mitochondrion 40.09 35.83
Zm00001d020729_P001 Maize plasma membrane 14.98 35.79
Zm00001d016041_P001 Maize extracellular 35.24 34.78
Zm00001d008590_P001 Maize plastid 20.26 34.59
CDX81500 Canola plasma membrane 31.28 34.13
Zm00001d026575_P001 Maize mitochondrion, peroxisome, plasma membrane, plastid, vacuole 29.52 33.84
AT1G68230.2 Thale cress plasma membrane 31.72 33.49
Bra004291.1-P Field mustard plasma membrane 30.84 33.18
CDX96038 Canola plasma membrane 30.84 33.18
Zm00001d037848_P008 Maize endoplasmic reticulum, nucleus, peroxisome 36.56 32.94
Zm00001d008982_P001 Maize cytosol, nucleus, plasma membrane 40.09 32.62
CDY01898 Canola plasma membrane 30.4 32.55
Zm00001d001901_P002 Maize plasma membrane 28.19 32.32
Zm00001d034313_P001 Maize cytosol, nucleus, plasma membrane 35.24 32.26
Zm00001d020229_P001 Maize plasma membrane 21.15 31.58
Zm00001d037453_P001 Maize cytosol, peroxisome, plasma membrane 35.68 31.03
GSMUA_AchrUn_... Banana golgi 48.02 30.97
Zm00001d018781_P001 Maize extracellular, mitochondrion 33.04 30.86
Zm00001d039316_P001 Maize cytosol, nucleus, plasma membrane 40.53 30.07
Zm00001d042846_P001 Maize plasma membrane 26.87 29.05
Zm00001d047517_P001 Maize peroxisome 28.19 28.07
VIT_01s0011g04030.t01 Wine grape cytosol 44.05 26.74
Zm00001d039213_P001 Maize golgi, plasma membrane, plastid 26.43 25.64
Bra033951.1-P Field mustard plasma membrane 32.16 24.17
CDY12701 Canola plasma membrane 31.72 23.84
Protein Annotations
EntrezGene:100284518MapMan:13.7.2.1ProteinID:AQK88217.1UniProt:B6TUJ8EMBL:EU968663GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0016020
GO:GO:0016021InterPro:IPR003388PFAM:PF02453PFscan:PS50845PANTHER:PTHR10994PANTHER:PTHR10994:SF81
InterPro:ReticulonTMHMM:TMhelixUniParc:UPI000182D284EnsemblPlantsGene:Zm00001d038910EnsemblPlants:Zm00001d038910_P001EnsemblPlants:Zm00001d038910_T001
SEG:seg:::::
Description
Seed maturation protein
Coordinates
chr6:-:166848168..166849957
Molecular Weight (calculated)
25414.4 Da
IEP (calculated)
9.871
GRAVY (calculated)
0.162
Length
227 amino acids
Sequence
(BLAST)
001: MSKAKLPHVE TDSSGDDDGP KPRLVFRRRM RTPVKLLGGR KVSDVLLWRN RNLSAGILAG ATLVWFLFDV AEYNVVTLLC HVALLGMVLL FVWSNAAPLL
101: DRPPPQIPEV IVSEHAFREA ARTTHYRLAH FVSVLYDVAC GKDLKKFLMV IGSLWILAIL GDTCSFTTLL YGGLLCALTL PALYERYEAE VDHLVAKGRE
201: DLKKFYRKVD SNVLNKIPRG PVKTKAL
Best Arabidopsis Sequence Match ( AT3G18260.1 )
(BLAST)
001: MPIFTGSSSD SEDERTIHKT TKLFTRQRSI HSIFGGGKVA DILLWREPKI AATLVIGVSI LWFLMEVVEY NFITLICHAS MTSMLFFFIW STASDFLNWE
101: RPLIPEVVLD ESSFKQLARS FHVRFNQILT KLLDVACGRD PPLFFLTTIS LYIVSIIGTY FNFVNLLFIG FVSMQTLPVM YEMYEDDVDT AAGKLMRKMK
201: KLYKKVDTNV LSKIPRGTVK NKKFT
Arabidopsis Description
RTNLB9Reticulon-like protein B9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJQ5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.