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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, peroxisome, plasma membrane
Any Predictor:peroxisome, secretory
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG33168 Sorghum golgi, peroxisome, plasma membrane 88.24 90.28
Os01t0691400-00 Rice cytosol, peroxisome 73.3 70.13
TraesCS3A01G261500.1 Wheat plasma membrane 68.78 69.41
TraesCS3B01G294700.1 Wheat plasma membrane 68.33 68.95
HORVU3Hr1G064240.2 Barley plasma membrane 66.52 67.12
Zm00001d038910_P001 Maize plasma membrane 58.82 57.27
GSMUA_Achr8P31770_001 Banana peroxisome 52.94 52.47
GSMUA_Achr2P07230_001 Banana golgi, plasma membrane, vacuole 46.15 48.57
VIT_17s0000g03260.t01 Wine grape plasma membrane 43.89 45.75
PGSC0003DMT400078544 Potato endoplasmic reticulum, plasma membrane, vacuole 30.77 44.16
KRH35899 Soybean plasma membrane 41.18 42.92
KRH48561 Soybean plasma membrane 42.99 42.79
KRH39144 Soybean plasma membrane 42.99 42.79
CDY66516 Canola endoplasmic reticulum, extracellular 34.84 41.4
Solyc03g119190.2.1 Tomato plasma membrane 40.27 40.64
Solyc05g008890.2.1 Tomato plasma membrane 40.27 40.27
CDY67571 Canola plasma membrane 38.91 38.39
PGSC0003DMT400014404 Potato cytosol, plasma membrane, vacuole 16.29 38.3
AT3G18260.1 Thale cress plasma membrane 38.91 38.22
CDY51936 Canola endoplasmic reticulum, peroxisome, plasma membrane 38.46 37.95
Bra037594.1-P Field mustard plasma membrane 38.46 37.95
CDX75962 Canola plasma membrane 38.46 37.95
Zm00001d016041_P001 Maize extracellular 36.65 35.22
AT1G68230.2 Thale cress plasma membrane 33.48 34.42
CDX81500 Canola plasma membrane 32.13 34.13
Zm00001d008590_P001 Maize plastid 20.36 33.83
Zm00001d020729_P001 Maize plasma membrane 14.48 33.68
Bra004291.1-P Field mustard plasma membrane 31.22 32.7
CDX96038 Canola plasma membrane 31.22 32.7
Zm00001d043551_P003 Maize plasma membrane 38.01 32.68
CDY01898 Canola plasma membrane 30.77 32.08
Zm00001d012776_P001 Maize extracellular 36.65 32.02
Zm00001d038768_P001 Maize extracellular, mitochondrion 36.65 31.89
Zm00001d037848_P008 Maize endoplasmic reticulum, nucleus, peroxisome 36.2 31.75
GSMUA_AchrUn_... Banana golgi 49.32 30.97
Zm00001d037453_P001 Maize cytosol, peroxisome, plasma membrane 36.2 30.65
Zm00001d008982_P001 Maize cytosol, nucleus, plasma membrane 38.46 30.47
Zm00001d001901_P002 Maize plasma membrane 26.7 29.8
Zm00001d026575_P001 Maize mitochondrion, peroxisome, plasma membrane, plastid, vacuole 26.7 29.8
Zm00001d020229_P001 Maize plasma membrane 20.36 29.61
Zm00001d047517_P001 Maize peroxisome 30.32 29.39
Zm00001d039316_P001 Maize cytosol, nucleus, plasma membrane 39.82 28.76
Zm00001d034313_P001 Maize cytosol, nucleus, plasma membrane 31.22 27.82
Zm00001d042846_P001 Maize plasma membrane 25.79 27.14
Zm00001d018781_P001 Maize extracellular, mitochondrion 29.41 26.75
VIT_01s0011g04030.t01 Wine grape cytosol 40.72 24.06
Zm00001d039213_P001 Maize golgi, plasma membrane, plastid 24.89 23.5
Bra033951.1-P Field mustard plasma membrane 31.67 23.18
CDY12701 Canola plasma membrane 31.22 22.85
Protein Annotations
EntrezGene:100279514MapMan:13.7.2.1ProteinID:AQK97624.1UniProt:B7ZYI3EMBL:BT054375GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0016020
GO:GO:0016021InterPro:IPR003388PFAM:PF02453PFscan:PS50845PANTHER:PTHR10994PANTHER:PTHR10994:SF81
InterPro:ReticulonTMHMM:TMhelixUniParc:UPI000191728FEnsemblPlantsGene:Zm00001d011631EnsemblPlants:Zm00001d011631_P001EnsemblPlants:Zm00001d011631_T001
SEG:seg:::::
Description
Reticulon-like protein B9
Coordinates
chr8:+:156787784..156790459
Molecular Weight (calculated)
24466.2 Da
IEP (calculated)
9.812
GRAVY (calculated)
0.270
Length
221 amino acids
Sequence
(BLAST)
001: MHPNFPSDHG NGRGVGGGGG HSRRKPIHQL LGGGRAADIL LWKDRNLSAG LLAGATLVWY LFEVVEYSIV PLVCQIAILA MLVVFIWSNA APLLNIAPPR
101: IPEVIISEHA FRQIAQIIHY KLAHTVSALY DIACGKDLKK FLLVVLSLLI VSEVVSSYSF TSLLYLGFLC AHTLPALYQR YETEVDHLAA RGSEDIKRFY
201: KRIDSNLLNK IPRGPVKTKV K
Best Arabidopsis Sequence Match ( AT3G18260.1 )
(BLAST)
001: MPIFTGSSSD SEDERTIHKT TKLFTRQRSI HSIFGGGKVA DILLWREPKI AATLVIGVSI LWFLMEVVEY NFITLICHAS MTSMLFFFIW STASDFLNWE
101: RPLIPEVVLD ESSFKQLARS FHVRFNQILT KLLDVACGRD PPLFFLTTIS LYIVSIIGTY FNFVNLLFIG FVSMQTLPVM YEMYEDDVDT AAGKLMRKMK
201: KLYKKVDTNV LSKIPRGTVK NKKFT
Arabidopsis Description
RTNLB9Reticulon-like protein B9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJQ5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.