Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plasma membrane, peroxisome

Predictor Summary:
  • plastid 1
  • plasma membrane 2
  • extracellular 1
  • endoplasmic reticulum 2
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, peroxisome, plasma membrane
Any Predictor:peroxisome, plasma membrane, plastid
BaCelLo:plastid
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX75962 Canola plasma membrane 97.77 97.77
CDY67571 Canola plasma membrane 86.61 86.61
CDY66516 Canola endoplasmic reticulum, extracellular 71.88 86.56
AT3G18260.1 Thale cress plasma membrane 84.82 84.44
PGSC0003DMT400014404 Potato cytosol, plasma membrane, vacuole 21.43 51.06
KRH48561 Soybean plasma membrane 50.45 50.9
Solyc03g119190.2.1 Tomato plasma membrane 48.66 49.77
KRH39144 Soybean plasma membrane 48.66 49.1
VIT_17s0000g03260.t01 Wine grape plasma membrane 45.09 47.64
KXG33168 Sorghum golgi, peroxisome, plasma membrane 40.62 42.13
TraesCS3B01G294700.1 Wheat plasma membrane 41.07 42.01
TraesCS3A01G261500.1 Wheat plasma membrane 40.62 41.55
GSMUA_Achr2P07230_001 Banana golgi, plasma membrane, vacuole 38.84 41.43
Os01t0139000-00 Rice plasma membrane 38.84 40.85
Os01t0691400-00 Rice cytosol, peroxisome 41.96 40.69
EES19907 Sorghum cytosol, peroxisome, plasma membrane 40.62 40.27
HORVU3Hr1G064240.2 Barley plasma membrane 39.29 40.18
Zm00001d038910_P001 Maize plasma membrane 40.18 39.65
GSMUA_Achr8P31770_001 Banana peroxisome 38.84 39.01
TraesCS1D01G380400.1 Wheat cytosol, peroxisome, plasma membrane 40.62 38.89
TraesCS1A01G373800.1 Wheat cytosol, peroxisome, plasma membrane 40.62 38.89
Zm00001d011631_P001 Maize golgi, peroxisome, plasma membrane 37.95 38.46
TraesCS1B01G393700.1 Wheat cytosol, peroxisome, plasma membrane 40.18 38.46
TraesCS3D01G050800.1 Wheat mitochondrion 38.84 37.18
TraesCS3B01G060400.1 Wheat mitochondrion 38.84 36.71
EES02516 Sorghum peroxisome, plastid 35.27 36.24
CDX81500 Canola plasma membrane 33.48 36.06
CDX96038 Canola plasma membrane 33.93 36.02
CDY01898 Canola plasma membrane 33.93 35.85
CDY08616 Canola plasma membrane 36.16 33.89
CDY25557 Canola cytosol, endoplasmic reticulum, nucleus 37.5 33.47
CDY34396 Canola cytosol, endoplasmic reticulum, nucleus 37.5 33.47
CDY08353 Canola cytosol, endoplasmic reticulum, nucleus 37.05 33.2
CDY38194 Canola cytosol, nucleus, plasma membrane 37.05 33.2
CDY00916 Canola plasma membrane 35.27 33.05
CDX79993 Canola cytosol, peroxisome, plasma membrane 36.16 32.27
CDY52012 Canola cytosol, peroxisome, plasma membrane 36.16 31.89
CDY53913 Canola cytosol, peroxisome, plasma membrane 36.16 31.89
CDY42012 Canola cytosol, peroxisome, plasma membrane 35.71 31.87
CDX90792 Canola cytosol, peroxisome, plasma membrane 37.95 31.84
CDY57657 Canola cytosol, nucleus, plasma membrane 37.95 30.91
CDY44123 Canola cytosol, nucleus, plasma membrane 37.5 30.43
CDY13240 Canola cytosol, peroxisome, plasma membrane 21.88 30.43
CDY10954 Canola cytosol 36.61 30.37
CDX67589 Canola golgi, plasma membrane, vacuole 27.23 30.05
CDY48510 Canola cytosol 32.59 30.04
CDY07184 Canola cytosol, peroxisome, plasma membrane 32.59 30.04
CDY46172 Canola plastid 26.79 29.7
CDY24806 Canola cytosol 36.16 29.56
CDX99221 Canola plasma membrane 26.79 29.56
CDY41666 Canola cytosol 36.16 29.35
CDX73507 Canola cytosol, golgi, plasma membrane 26.79 29.27
CDX78209 Canola golgi, plasma membrane, vacuole 26.79 29.27
CDY36282 Canola plasma membrane 29.02 29.15
CDY51584 Canola plasma membrane 26.34 29.06
Zm00001d008590_P001 Maize plastid 16.96 28.57
CDY22971 Canola plasma membrane 25.0 28.57
CDY22970 Canola plasma membrane 25.0 28.57
CDX82294 Canola plastid 25.0 28.57
CDY00975 Canola cytosol, endoplasmic reticulum, peroxisome 30.36 28.45
HORVU1Hr1G083110.3 Barley plastid 37.05 28.42
CDY08567 Canola cytosol 30.36 28.22
CDY05135 Canola mitochondrion 37.5 26.84
TraesCS3A01G051200.1 Wheat cytosol 38.84 26.36
CDY48222 Canola cytosol, endoplasmic reticulum, plasma membrane 23.66 26.11
CDX71213 Canola plasma membrane 23.66 26.11
CDY12701 Canola plasma membrane 34.82 25.83
CDX82165 Canola endoplasmic reticulum, peroxisome, plasma membrane, plastid 28.57 25.81
HORVU3Hr1G008400.1 Barley cytosol, peroxisome 38.84 25.0
CDY62522 Canola cytosol 8.93 25.0
CDX76854 Canola plasma membrane 22.32 24.15
CDY46067 Canola plasma membrane 22.32 24.04
GSMUA_AchrUn_... Banana golgi 36.61 23.3
CDX89122 Canola extracellular, mitochondrion 15.62 22.88
CDX86802 Canola cytosol, nucleus, peroxisome 24.11 22.04
CDY56712 Canola mitochondrion 34.82 21.97
Protein Annotations
MapMan:13.7.2.1GO:A0A078IPP4UniProt:A0A078IPP4EnsemblPlants:CDY51936ProteinID:CDY51936ProteinID:CDY51936.1
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789
GO:GO:0016020GO:GO:0016021EnsemblPlantsGene:GSBRNA2T00004525001InterPro:IPR003388PFAM:PF02453PFscan:PS50845
PANTHER:PTHR10994PANTHER:PTHR10994:SF85InterPro:ReticulonTMHMM:TMhelixUniParc:UPI0004EF2A9ESEG:seg
Description
BnaAnng11130DReticulon-like protein [Source:UniProtKB/TrEMBL;Acc:A0A078IPP4]
Coordinates
chrLK033040:-:73085..74330
Molecular Weight (calculated)
26114.2 Da
IEP (calculated)
9.602
GRAVY (calculated)
0.152
Length
224 amino acids
Sequence
(BLAST)
001: MPIFGGSSDS EDERTMHQMT KFFNRQRSIH SIFGGGKFAD ILLWREPKIA ATLAIGVSVF WFLMEVVEYN FITLICHASM TSMLIFFIWS TASDFLNWER
101: PMIPEVVLNE SSFKELARSF HDRFNRMLSK LLDIACGRDP PLFFLTTISL YILSIIGTYF NFMNLLFIGF ISMQTLPVMY ELYEDDVDRV LSKLARKMRK
201: LYRKIDSNVL SKIPRGTVKI KKHT
Best Arabidopsis Sequence Match ( AT3G18260.1 )
(BLAST)
001: MPIFTGSSSD SEDERTIHKT TKLFTRQRSI HSIFGGGKVA DILLWREPKI AATLVIGVSI LWFLMEVVEY NFITLICHAS MTSMLFFFIW STASDFLNWE
101: RPLIPEVVLD ESSFKQLARS FHVRFNQILT KLLDVACGRD PPLFFLTTIS LYIVSIIGTY FNFVNLLFIG FVSMQTLPVM YEMYEDDVDT AAGKLMRKMK
201: KLYKKVDTNV LSKIPRGTVK NKKFT
Arabidopsis Description
RTNLB9Reticulon-like protein B9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJQ5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.