Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY48510 | Canola | cytosol | 98.77 | 98.77 |
| AT4G01230.2 | Thale cress | cytosol | 84.36 | 84.02 |
| CDY52012 | Canola | cytosol, peroxisome, plasma membrane | 51.85 | 49.61 |
| CDX79993 | Canola | cytosol, peroxisome, plasma membrane | 51.03 | 49.4 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, plasma membrane | 52.26 | 49.22 |
| CDY53913 | Canola | cytosol, peroxisome, plasma membrane | 51.44 | 49.21 |
| CDY42012 | Canola | cytosol, peroxisome, plasma membrane | 50.62 | 49.0 |
| Os01t0226300-01 | Rice | plasma membrane | 34.98 | 47.75 |
| GSMUA_Achr10P... | Banana | cytosol, endoplasmic reticulum, plasma membrane | 48.97 | 47.22 |
| KRH00872 | Soybean | endoplasmic reticulum | 49.79 | 46.72 |
| KRH40357 | Soybean | endoplasmic reticulum | 49.38 | 46.69 |
| GSMUA_Achr3P31920_001 | Banana | cytosol | 41.15 | 45.66 |
| CDY25557 | Canola | cytosol, endoplasmic reticulum, nucleus | 46.5 | 45.02 |
| GSMUA_Achr8P27830_001 | Banana | cytosol, peroxisome, plasma membrane | 46.5 | 45.02 |
| GSMUA_Achr9P05440_001 | Banana | nucleus, peroxisome, plasma membrane | 46.5 | 45.02 |
| Os05t0526400-01 | Rice | plasma membrane | 46.5 | 45.02 |
| KRH06560 | Soybean | endoplasmic reticulum | 47.33 | 44.92 |
| Solyc10g011870.2.1 | Tomato | cytosol, nucleus, plasma membrane | 48.56 | 44.87 |
| TraesCS3D01G279100.1 | Wheat | cytosol, nucleus, plasma membrane | 45.68 | 44.76 |
| Zm00001d043551_P003 | Maize | plasma membrane | 47.33 | 44.75 |
| PGSC0003DMT400049928 | Potato | cytosol, nucleus, plasma membrane | 46.91 | 44.71 |
| CDY38194 | Canola | cytosol, nucleus, plasma membrane | 45.68 | 44.4 |
| TraesCS1D01G349700.1 | Wheat | cytosol, nucleus, plasma membrane | 45.27 | 44.35 |
| TraesCS3A01G278800.1 | Wheat | golgi | 45.27 | 44.35 |
| Os01t0736900-01 | Rice | plasma membrane | 46.09 | 44.27 |
| Zm00001d012776_P001 | Maize | extracellular | 46.09 | 44.27 |
| CDY34396 | Canola | cytosol, endoplasmic reticulum, nucleus | 45.68 | 44.22 |
| TraesCS1B01G360800.1 | Wheat | cytosol, nucleus, plasma membrane | 45.27 | 44.18 |
| PGSC0003DMT400000230 | Potato | cytosol, nucleus, plasma membrane | 48.15 | 44.15 |
| CDY08353 | Canola | cytosol, endoplasmic reticulum, nucleus | 45.27 | 44.0 |
| KXG33320 | Sorghum | cytosol, nucleus, plasma membrane | 46.5 | 43.8 |
| Solyc01g095200.2.1 | Tomato | plastid | 47.33 | 43.73 |
| GSMUA_Achr4P08400_001 | Banana | cytosol | 45.27 | 43.48 |
| HORVU3Hr1G069970.2 | Barley | cytosol, nucleus, plasma membrane | 45.27 | 43.14 |
| TraesCS3B01G313000.1 | Wheat | cytosol, nucleus, plasma membrane | 44.86 | 43.08 |
| CDY44123 | Canola | cytosol, nucleus, plasma membrane | 48.56 | 42.75 |
| CDY57657 | Canola | cytosol, nucleus, plasma membrane | 48.15 | 42.55 |
| GSMUA_Achr6P31860_001 | Banana | cytosol, nucleus, plasma membrane | 44.03 | 42.46 |
| CDX90792 | Canola | cytosol, peroxisome, plasma membrane | 46.5 | 42.32 |
| Zm00001d020729_P001 | Maize | plasma membrane | 16.46 | 42.11 |
| CDY24806 | Canola | cytosol | 47.33 | 41.97 |
| CDY10954 | Canola | cytosol | 46.5 | 41.85 |
| EES19841 | Sorghum | cytosol, nucleus, plasma membrane | 43.62 | 41.57 |
| CDY41666 | Canola | cytosol | 46.5 | 40.94 |
| Zm00001d008982_P001 | Maize | cytosol, nucleus, plasma membrane | 46.91 | 40.86 |
| GSMUA_Achr5P06850_001 | Banana | cytosol, nucleus, plasma membrane | 41.98 | 40.8 |
| Zm00001d038768_P001 | Maize | extracellular, mitochondrion | 42.39 | 40.55 |
| TraesCS3B01G178100.1 | Wheat | cytosol, nucleus, plasma membrane | 47.33 | 40.21 |
| TraesCS3D01G159100.1 | Wheat | cytosol, nucleus, plasma membrane | 47.33 | 40.21 |
| KXG31516 | Sorghum | cytosol, nucleus, plasma membrane | 46.91 | 40.14 |
| Zm00001d016041_P001 | Maize | extracellular | 37.45 | 39.57 |
| KRG99174 | Soybean | endoplasmic reticulum, plasma membrane | 13.99 | 39.08 |
| KRH48008 | Soybean | cytosol, peroxisome, plasma membrane | 49.79 | 38.53 |
| Os02t0265900-01 | Rice | cytosol, peroxisome, plasma membrane | 35.8 | 37.83 |
| OQU84758 | Sorghum | cytosol, peroxisome, plasma membrane | 35.8 | 37.5 |
| TraesCS7D01G337800.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 39.92 | 37.31 |
| TraesCS1A01G346800.3 | Wheat | plasma membrane | 38.68 | 37.3 |
| Zm00001d039316_P001 | Maize | cytosol, nucleus, plasma membrane | 46.5 | 36.93 |
| Zm00001d020229_P001 | Maize | plasma membrane | 23.05 | 36.84 |
| TraesCS7A01G341800.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 39.09 | 36.54 |
| TraesCS7B01G241100.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 39.09 | 36.54 |
| CDY05135 | Canola | mitochondrion | 46.91 | 36.42 |
| CDY00916 | Canola | plasma membrane | 35.8 | 36.4 |
| HORVU1Hr1G082010.3 | Barley | cytosol, nucleus, plasma membrane, plastid | 39.09 | 36.4 |
| CDY13240 | Canola | cytosol, peroxisome, plasma membrane | 23.87 | 36.02 |
| HORVU3Hr1G030760.2 | Barley | mitochondrion | 46.5 | 35.99 |
| CDY08616 | Canola | plasma membrane | 34.98 | 35.56 |
| TraesCS3A01G151200.1 | Wheat | cytosol, peroxisome, plasma membrane | 46.91 | 35.4 |
| VIT_02s0025g00590.t01 | Wine grape | mitochondrion | 8.64 | 35.0 |
| EER89811 | Sorghum | peroxisome | 36.63 | 34.77 |
| Os06t0503400-01 | Rice | plasma membrane | 37.45 | 34.34 |
| CDX75962 | Canola | plasma membrane | 30.45 | 33.04 |
| CDY67571 | Canola | plasma membrane | 30.45 | 33.04 |
| Zm00001d037453_P001 | Maize | cytosol, peroxisome, plasma membrane | 35.39 | 32.95 |
| CDY51936 | Canola | endoplasmic reticulum, peroxisome, plasma membrane | 30.04 | 32.59 |
| HORVU7Hr1G081290.4 | Barley | plastid | 30.86 | 32.47 |
| CDY66516 | Canola | endoplasmic reticulum, extracellular | 24.28 | 31.72 |
| CDX67589 | Canola | golgi, plasma membrane, vacuole | 26.34 | 31.53 |
| HORVU7Hr1G075700.2 | Barley | mitochondrion | 38.68 | 31.33 |
| CDY51584 | Canola | plasma membrane | 25.93 | 31.03 |
| CDX81500 | Canola | plasma membrane | 25.51 | 29.81 |
| CDX78209 | Canola | golgi, plasma membrane, vacuole | 25.1 | 29.76 |
| CDX96038 | Canola | plasma membrane | 25.1 | 28.91 |
| CDX73507 | Canola | cytosol, golgi, plasma membrane | 24.28 | 28.78 |
| CDX99221 | Canola | plasma membrane | 23.87 | 28.57 |
| CDY01898 | Canola | plasma membrane | 24.69 | 28.3 |
| CDY46172 | Canola | plastid | 23.46 | 28.22 |
| CDX82294 | Canola | plastid | 22.22 | 27.55 |
| CDY62522 | Canola | cytosol | 9.05 | 27.5 |
| CDY36282 | Canola | plasma membrane | 25.1 | 27.35 |
| CDX86802 | Canola | cytosol, nucleus, peroxisome | 27.57 | 27.35 |
| CDY08567 | Canola | cytosol | 26.75 | 26.97 |
| CDX89122 | Canola | extracellular, mitochondrion | 16.87 | 26.8 |
| CDY00975 | Canola | cytosol, endoplasmic reticulum, peroxisome | 26.34 | 26.78 |
| CDX71213 | Canola | plasma membrane | 22.22 | 26.6 |
| CDY22970 | Canola | plasma membrane | 21.4 | 26.53 |
| CDY22971 | Canola | plasma membrane | 21.4 | 26.53 |
| CDY48222 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 21.81 | 26.11 |
| CDX82165 | Canola | endoplasmic reticulum, peroxisome, plasma membrane, plastid | 25.93 | 25.4 |
| CDY56712 | Canola | mitochondrion | 36.63 | 25.07 |
| GSMUA_Achr3P15760_001 | Banana | cytosol | 14.4 | 23.33 |
| CDY12701 | Canola | plasma membrane | 25.93 | 20.86 |
| CDY46067 | Canola | plasma membrane | 16.05 | 18.75 |
| CDX76854 | Canola | plasma membrane | 15.64 | 18.36 |
Protein Annotations
| EnsemblPlants:CDY07184 | EnsemblPlantsGene:GSBRNA2T00123543001 | GO:A0A078F2M0 | InterPro:IPR003388 | InterPro:Reticulon | PANTHER:PTHR10994 |
| PANTHER:PTHR10994:SF95 | PFAM:PF02453 | PFscan:PS50845 | ProteinID:CDY07184 | ProteinID:CDY07184.1 | TMHMM:TMhelix |
| UniParc:UPI0004EECA7D | MapMan:13.7.2.1 | : | : | : | : |
Description
BnaCnng01990D
Coordinates
chrLK031975:-:730921..732005
Molecular Weight (calculated)
27566.0 Da
IEP (calculated)
6.166
GRAVY (calculated)
0.250
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKEEEKLER VGPLEEPLMK NIVPEEDSLS MSDTDSEIPD SPVPINAPIY RMFGRERPIH MVLGGGKPAD VLLWRDKKVT AGLVGAVTVI WLLFGFGHCR
101: LLTFVCRGSI LFVILSFVWS NALNRSPEKI MEIYIPEKPL LQAASALTFE VNCALATLRS IALERDIKNF ALVVIGLWLV SIIGSWFSFL SLIYICFVLI
201: HTVPKLYEKY EDEIDPIAEK AVIEMKKHFQ VLEAKFLSKS HHH
101: LLTFVCRGSI LFVILSFVWS NALNRSPEKI MEIYIPEKPL LQAASALTFE VNCALATLRS IALERDIKNF ALVVIGLWLV SIIGSWFSFL SLIYICFVLI
201: HTVPKLYEKY EDEIDPIAEK AVIEMKKHFQ VLEAKFLSKS HHH
001: MEEEKLEIVG PLEEPLMGNI VPEEINGLDS LTSSDSDSEK PDSPVPINAP IYRMFGRERP IHMVLGGGKP ADVLLWRDKK VTLGLLSAVT VIWLLFGFGG
101: RRLLTSLCRG SILFLLLSFL WSNALNKSPE NMMDIYIPEK PLLQAASAMT FELNCAFATL RSIALERDIK NFVMAVIGLW LVSVIGNWFS FLSLLYICFV
201: LIHTVPMLYE KYEDEIDPIA EKAVIEMKKH YQVFEAKFLS KIPH
101: RRLLTSLCRG SILFLLLSFL WSNALNKSPE NMMDIYIPEK PLLQAASAMT FELNCAFATL RSIALERDIK NFVMAVIGLW LVSVIGNWFS FLSLLYICFV
201: LIHTVPMLYE KYEDEIDPIA EKAVIEMKKH YQVFEAKFLS KIPH
Arabidopsis Description
RTNLB7Reticulon-like protein B7 [Source:UniProtKB/Swiss-Prot;Acc:Q9M145]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.