Skip to main content
crop-pal logo
Banana
Search for another protein from :
Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • plastid 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr1P00860_001
GSMUA_Achr1P04070_001
GSMUA_Achr1P24970_001
GSMUA_Achr1P25230_001
GSMUA_Achr2P07050_001
GSMUA_Achr3P15760_001
GSMUA_Achr3P31920_001
GSMUA_Achr4P08400_001
GSMUA_Achr4P16430_001
GSMUA_Achr4P20820_001
GSMUA_Achr4P22340_001
GSMUA_Achr4P27140_001
GSMUA_Achr4P30410_001
GSMUA_Achr5P06850_001
GSMUA_Achr5P15070_001
GSMUA_Achr5P23170_001
GSMUA_Achr6P31860_001
GSMUA_Achr6P34270_001
GSMUA_Achr7P01900_001
GSMUA_Achr7P09070_001
GSMUA_Achr7P17170_001
GSMUA_Achr7P17180_001
GSMUA_Achr7P18540_001
GSMUA_Achr8P00730_001
GSMUA_Achr8P02620_001
GSMUA_Achr8P27830_001
GSMUA_Achr8P29730_001
GSMUA_Achr8P29900_001
GSMUA_Achr9P03220_001
GSMUA_Achr9P05440_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G11220.1 GSMUA_Achr1P24970_001 AT1G09330.1 21798944
AT4G11220.1 GSMUA_Achr2P07050_001 AT1G09330.1 21798944
AT4G11220.1 GSMUA_Achr8P29900_001 AT1G09330.1 21798944
AT4G11220.1 GSMUA_Achr4P22340_001 AT3G59500.1 21798944
AT4G11220.1 GSMUA_Achr5P15070_001 AT3G59500.1 21798944
AT5G41600.1 GSMUA_Achr7P09070_001 AT1G55190.1 21798944
AT5G41600.1 GSMUA_Achr10P... AT1G77350.1 21798944
AT5G41600.1 GSMUA_Achr4P16430_001 AT2G03120.1 21798944
AT5G41600.1 GSMUA_Achr5P23170_001 AT2G39960.1 21798944
AT5G41600.1 GSMUA_Achr7P18540_001 AT2G39960.1 21798944
AT5G41600.1 GSMUA_Achr1P00860_001 AT2G46890.1 21798944
AT5G41600.1 GSMUA_Achr1P25230_001 AT3G02420.1 21798944
AT5G41600.1 GSMUA_Achr7P17170_001 AT3G02420.1 21798944
AT5G41600.1 GSMUA_Achr7P17180_001 AT3G02420.1 21798944
AT5G41600.1 GSMUA_Achr8P29730_001 AT3G02420.1 21798944
AT5G41600.1 GSMUA_Achr4P20820_001 AT3G07950.1 21798944
AT5G41600.1 GSMUA_Achr7P01900_001 AT3G07950.1 21798944
AT5G41600.1 GSMUA_Achr8P00730_001 AT3G27080.1 21798944
AT5G41600.1 GSMUA_Achr10P... AT3G46060.1 21798944
AT5G41600.1 GSMUA_Achr10P... AT3G46060.1 21798944
AT5G41600.1 GSMUA_Achr11P... AT3G46060.1 21798944
AT5G41600.1 GSMUA_Achr6P34270_001 AT3G46060.1 21798944
AT5G41600.1 GSMUA_Achr8P02620_001 AT3G46060.1 21798944
AT5G41600.1 GSMUA_Achr9P03220_001 AT3G46060.1 21798944
AT5G41600.1 GSMUA_AchrUn_... AT3G46060.1 21798944
AT5G41600.1 GSMUA_Achr4P22340_001 AT3G59500.1 21798944
AT5G41600.1 GSMUA_Achr5P15070_001 AT3G59500.1 21798944
AT5G41600.1 GSMUA_Achr10P... AT5G41600.1 21798944
AT5G41600.1 GSMUA_Achr3P15760_001 AT5G41600.1 21798944
AT5G41600.1 GSMUA_Achr3P31920_001 AT5G41600.1 21798944
AT5G41600.1 GSMUA_Achr4P08400_001 AT5G41600.1 21798944
AT5G41600.1 GSMUA_Achr5P06850_001 AT5G41600.1 21798944
AT5G41600.1 GSMUA_Achr6P31860_001 AT5G41600.1 21798944
AT5G41600.1 GSMUA_Achr8P27830_001 AT5G41600.1 21798944
AT5G41600.1 GSMUA_Achr9P05440_001 AT5G41600.1 21798944
AT5G41600.1 GSMUA_AchrUn_... AT5G41600.1 21798944
AT5G41600.1 GSMUA_Achr11P... AT5G53560.1 21798944
AT5G41600.1 GSMUA_Achr1P04070_001 AT5G53560.1 21798944
AT5G41600.1 GSMUA_Achr4P27140_001 AT5G53560.1 21798944
AT5G41600.1 GSMUA_Achr4P30410_001 AT5G53560.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr9P05440_001 Banana nucleus, peroxisome, plasma membrane 86.85 86.85
GSMUA_Achr6P31860_001 Banana cytosol, nucleus, plasma membrane 83.27 82.94
GSMUA_AchrUn_... Banana cytosol, nucleus, plasma membrane 80.08 77.91
GSMUA_Achr3P31920_001 Banana cytosol 64.14 73.52
GSMUA_Achr4P08400_001 Banana cytosol 72.51 71.94
VIT_02s0025g00640.t01 Wine grape cytosol, nucleus, plasma membrane 69.72 69.44
VIT_15s0046g01760.t01 Wine grape cytosol, peroxisome, plasma membrane 70.52 69.41
KRH59988 Soybean mitochondrion 70.12 69.29
KRH41254 Soybean cytosol, nucleus, plasma membrane 70.12 69.29
PGSC0003DMT400049928 Potato cytosol, nucleus, plasma membrane 68.13 67.06
Solyc10g011870.2.1 Tomato cytosol, nucleus, plasma membrane 69.32 66.16
Solyc03g007740.2.1 Tomato nucleus 66.14 65.1
GSMUA_Achr10P... Banana cytosol, endoplasmic reticulum, plasma membrane 65.34 65.08
Solyc01g095200.2.1 Tomato plastid 68.13 65.02
PGSC0003DMT400000230 Potato cytosol, nucleus, plasma membrane 68.53 64.91
PGSC0003DMT400051387 Potato cytosol, nucleus, plasma membrane 64.94 63.92
KRH40357 Soybean endoplasmic reticulum 65.34 63.81
CDY25557 Canola cytosol, endoplasmic reticulum, nucleus 63.74 63.74
Bra004562.1-P Field mustard cytosol, peroxisome, plasma membrane 63.74 63.74
CDX79993 Canola cytosol, peroxisome, plasma membrane 63.74 63.74
CDY34396 Canola cytosol, endoplasmic reticulum, nucleus 63.35 63.35
PGSC0003DMT400032086 Potato cytosol, nucleus, plasma membrane 68.13 63.33
KRH00872 Soybean endoplasmic reticulum 65.34 63.32
KRG99174 Soybean endoplasmic reticulum, plasma membrane 21.91 63.22
CDY38194 Canola cytosol, nucleus, plasma membrane 62.95 63.2
CDY52012 Canola cytosol, peroxisome, plasma membrane 63.74 62.99
Solyc08g081730.2.1 Tomato endoplasmic reticulum, plastid 67.73 62.96
CDY42012 Canola cytosol, peroxisome, plasma membrane 62.95 62.95
Bra027678.1-P Field mustard cytosol, endoplasmic reticulum, nucleus 62.95 62.95
PGSC0003DMT400074360 Potato cytosol, nucleus, plasma membrane 63.35 62.85
AT5G41600.1 Thale cress cytosol, nucleus, plasma membrane 64.14 62.65
KRH06560 Soybean endoplasmic reticulum 63.74 62.5
CDY08353 Canola cytosol, endoplasmic reticulum, nucleus 62.15 62.4
Bra027757.1-P Field mustard cytosol, endoplasmic reticulum, peroxisome 62.15 62.4
CDY53913 Canola cytosol, peroxisome, plasma membrane 62.95 62.2
Bra003455.1-P Field mustard cytosol, peroxisome, plasma membrane 62.95 62.2
Solyc06g036430.2.1 Tomato cytosol, nucleus, plasma membrane 62.55 62.06
AT4G23630.2 Thale cress nucleus 67.33 61.45
Bra000739.1-P Field mustard cytosol 65.34 61.42
CDX90792 Canola cytosol, peroxisome, plasma membrane 64.94 61.05
AT2G46170.1 Thale cress cytosol, nucleus, plasma membrane 61.75 60.78
AT4G11220.1 Thale cress nucleus 65.34 60.52
CDY44123 Canola cytosol, nucleus, plasma membrane 66.53 60.51
AT3G61560.1 Thale cress cytosol, nucleus, plasma membrane 60.96 60.47
CDY57657 Canola cytosol, nucleus, plasma membrane 66.14 60.36
Bra013717.1-P Field mustard nucleus 66.14 60.14
Bra019285.1-P Field mustard cytosol 64.14 60.07
CDY10954 Canola cytosol 64.54 60.0
CDY24806 Canola cytosol 65.34 59.85
Bra010539.1-P Field mustard cytosol 64.14 59.85
CDY41666 Canola cytosol 65.34 59.42
GSMUA_Achr5P06850_001 Banana cytosol, nucleus, plasma membrane 58.17 58.4
CDY13240 Canola cytosol, peroxisome, plasma membrane 37.45 58.39
VIT_16s0050g01790.t01 Wine grape cytosol, nucleus, plasma membrane 58.96 58.27
AT1G64090.2 Thale cress cytosol, endoplasmic reticulum, nucleus 61.75 57.2
GSMUA_Achr3P15760_001 Banana cytosol 33.07 55.33
CDY62522 Canola cytosol 17.53 55.0
GSMUA_Achr10P... Banana golgi, peroxisome, plasma membrane 53.39 54.03
GSMUA_Achr6P15870_001 Banana golgi, peroxisome, plasma membrane 53.39 54.03
KRH35223 Soybean cytosol, nucleus, plasma membrane 53.78 54.0
GSMUA_Achr5P07570_001 Banana golgi, peroxisome, plasma membrane 52.99 53.63
KRH48008 Soybean cytosol, peroxisome, plasma membrane 66.53 53.18
GSMUA_Achr10P... Banana cytosol, endoplasmic reticulum, peroxisome 41.43 52.53
VIT_02s0025g00590.t01 Wine grape mitochondrion 12.35 51.67
CDY05135 Canola mitochondrion 63.74 51.12
AT4G01230.2 Thale cress cytosol 47.01 48.36
Bra037369.1-P Field mustard cytosol 45.02 46.5
CDY48510 Canola cytosol 45.02 46.5
CDY07184 Canola cytosol, peroxisome, plasma membrane 45.02 46.5
GSMUA_Achr6P04560_001 Banana cytosol, peroxisome, plasma membrane 41.43 41.94
Bra035242.1-P Field mustard cytosol 32.27 40.5
GSMUA_Achr9P10200_001 Banana cytosol, peroxisome, plasma membrane 39.04 40.5
GSMUA_Achr8P31770_001 Banana peroxisome 35.86 40.36
CDX86802 Canola cytosol, nucleus, peroxisome 38.25 39.18
KRG91601 Soybean mitochondrion 52.99 39.12
GSMUA_Achr2P07230_001 Banana golgi, plasma membrane, vacuole 32.27 38.57
GSMUA_Achr7P05440_001 Banana peroxisome, plasma membrane, vacuole 31.87 35.87
GSMUA_Achr3P09820_001 Banana cytosol, peroxisome, plasma membrane 32.67 35.65
VIT_07s0031g02730.t01 Wine grape golgi, mitochondrion, nucleus, plasma membrane 25.1 35.0
GSMUA_Achr10P... Banana plasma membrane 29.88 32.61
CDX89122 Canola extracellular, mitochondrion 19.52 32.03
GSMUA_Achr8P02250_001 Banana cytosol, mitochondrion, peroxisome, plasma membrane 29.88 30.36
GSMUA_Achr6P33560_001 Banana plasma membrane 31.08 29.55
GSMUA_Achr4P20190_001 Banana cytosol, plastid 31.87 28.37
GSMUA_AchrUn_... Banana golgi 34.26 24.43
Protein Annotations
EnsemblPlants:GSMUA_Achr8P27830_001EnsemblPlants:GSMUA_Achr8T27830_001EnsemblPlantsGene:GSMUA_Achr8G27830_001GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0016020GO:GO:0016021InterPro:IPR003388
InterPro:ReticulonPANTHER:PTHR10994PANTHER:PTHR10994:SF70PFAM:PF02453PFscan:PS50845SEG:seg
TMHMM:TMhelixUniParc:UPI0002955209UniProt:M0TU86MapMan:13.7.2.1::
Description
Reticulon-like protein B2 [Source:GMGC_GENE;Acc:GSMUA_Achr8G27830_001]
Coordinates
chr8:+:30829761..30832452
Molecular Weight (calculated)
28089.4 Da
IEP (calculated)
8.848
GRAVY (calculated)
0.147
Length
251 amino acids
Sequence
(BLAST)
001: MATEQPGETL IEKIKEKIHG GDSSSSDSDD EKSKASEVAE AVKSKIFRLF GREKPVHRIL GGGKPADVFL WKNKKASAIV LGGATAIWVL FELMEYHLLT
101: LVCHCLILSL AILFLWSNAT TFINKSPPHI PEVIIPEDLS VNIALSLRYE INRGFAVLRE IAAGRDVKKF LAVIVGLWVL SVIGNCCNFL TLFYIAFVTL
201: HTVPFLYDKY EDQVDSFAEK ATVEFKKHYA VIHAKYLSKI PRGPLKDKKV Q
Best Arabidopsis Sequence Match ( AT4G11220.1 )
(BLAST)
001: MADEHKHEES SPNLDPAVEV VERESLMEKL SEKIHHKGDS SSSSSSDDEN EKKSSSSSPK SLKSKVYRLF GRERPVHKVL GGGKPADIFM WKDKKMSGGV
101: FGGATVAWVL FELMEYHLLT LLCHVMIVAL AVLFLWSNAT MFIHKSPPKI PEVHIPEEPL LQLASGLRIE INRGISSLRE IASGRDIKKF LSAIAGLWVL
201: SILGGCYSFL TLAYIALVLL FTVPLFYDKY EDKVDSYGEK AMAELKKQYA VLDAKVFSKI PRGPLKDKKK D
Arabidopsis Description
RTNLB2Reticulon-like protein B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUT9]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.