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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • plasma membrane 3
  • plastid 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane, plastid
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc06g049060.2.1 Tomato mitochondrion, plasma membrane 56.09 67.89
EER92307 Sorghum peroxisome 66.09 66.67
Zm00001d047517_P001 Maize peroxisome 65.22 65.79
Os03t0336600-02 Rice plasma membrane 65.22 64.94
TraesCS4D01G171300.2 Wheat peroxisome 62.61 63.44
TraesCS4B01G169100.2 Wheat cytosol, peroxisome, vacuole 62.61 63.44
TraesCS4A01G135900.1 Wheat peroxisome 62.61 63.44
KRH18469 Soybean plasma membrane 53.91 62.63
KRG93546 Soybean plasma membrane 53.48 61.81
PGSC0003DMT400042905 Potato cytosol, peroxisome, plasma membrane 60.87 58.82
HORVU4Hr1G050020.1 Barley plastid 63.91 56.76
Bra034153.1-P Field mustard plasma membrane 51.74 53.36
CDY36282 Canola plasma membrane 51.74 53.36
Bra029878.1-P Field mustard cytosol, peroxisome, plasma membrane 53.04 51.05
CDY00975 Canola cytosol, endoplasmic reticulum, peroxisome 53.04 51.05
CDY08567 Canola cytosol 53.04 50.62
AT3G10915.7 Thale cress plasma membrane 53.91 49.4
GSMUA_Achr7P05440_001 Banana peroxisome, plasma membrane, vacuole 38.26 39.46
GSMUA_Achr10P... Banana plasma membrane 35.65 35.65
VIT_13s0067g02960.t01 Wine grape endoplasmic reticulum, peroxisome, plasma membrane 48.26 33.95
GSMUA_Achr3P31920_001 Banana cytosol 31.74 33.33
GSMUA_Achr8P31770_001 Banana peroxisome 32.17 33.18
GSMUA_Achr4P20190_001 Banana cytosol, plastid 40.43 32.98
GSMUA_Achr8P27830_001 Banana cytosol, peroxisome, plasma membrane 35.65 32.67
GSMUA_Achr6P31860_001 Banana cytosol, nucleus, plasma membrane 35.65 32.54
GSMUA_Achr10P... Banana golgi, peroxisome, plasma membrane 34.78 32.26
GSMUA_Achr5P07570_001 Banana golgi, peroxisome, plasma membrane 34.35 31.85
GSMUA_Achr6P15870_001 Banana golgi, peroxisome, plasma membrane 34.35 31.85
GSMUA_Achr10P... Banana cytosol, endoplasmic reticulum, peroxisome 27.39 31.82
GSMUA_Achr5P06850_001 Banana cytosol, nucleus, plasma membrane 34.35 31.6
GSMUA_Achr9P05440_001 Banana nucleus, peroxisome, plasma membrane 34.35 31.47
GSMUA_Achr2P07230_001 Banana golgi, plasma membrane, vacuole 28.7 31.43
GSMUA_Achr10P... Banana cytosol, endoplasmic reticulum, plasma membrane 34.35 31.35
GSMUA_AchrUn_... Banana cytosol, nucleus, plasma membrane 34.78 31.01
GSMUA_Achr8P02250_001 Banana cytosol, mitochondrion, peroxisome, plasma membrane 33.04 30.77
GSMUA_Achr6P04560_001 Banana cytosol, peroxisome, plasma membrane 31.3 29.03
GSMUA_Achr9P10200_001 Banana cytosol, peroxisome, plasma membrane 30.0 28.51
GSMUA_Achr4P08400_001 Banana cytosol 30.87 28.06
GSMUA_Achr6P33560_001 Banana plasma membrane 31.74 27.65
GSMUA_Achr3P15760_001 Banana cytosol 15.22 23.33
GSMUA_AchrUn_... Banana golgi 29.57 19.32
Protein Annotations
EnsemblPlants:GSMUA_Achr3P09820_001EnsemblPlants:GSMUA_Achr3T09820_001EnsemblPlantsGene:GSMUA_Achr3G09820_001GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0016020GO:GO:0016021InterPro:IPR003388
InterPro:ReticulonPANTHER:PTHR10994PANTHER:PTHR10994:SF67PFAM:PF02453PFscan:PS50845SEG:seg
TMHMM:TMhelixUniParc:UPI000296D208UniProt:M0SD99MapMan:13.7.2.1::
Description
Reticulon-like protein B16 [Source:GMGC_GENE;Acc:GSMUA_Achr3G09820_001]
Coordinates
chr3:-:7136801..7141405
Molecular Weight (calculated)
26205.3 Da
IEP (calculated)
9.964
GRAVY (calculated)
0.269
Length
230 amino acids
Sequence
(BLAST)
001: MEGSVSDPSN GEIAAEGRKE SALDHCYRLF NRQRSIHQII GGGKAADVIL WKRRWISIAV MIGATIAWFL FERSGLSFLT ICSDILLILI VIQFARANSA
101: VLLDKQLQPL PELVLSEEMV NNAAASFRVK INNMLMMAHD ITLGKDFRIF FQVVVILWLL SVVGSFFSFF TLAYIGIIVS FTIPALYDKY EDRVDRYAGM
201: VHRKISKHYK IVDENVIRRL PRRFSKSKDA
Best Arabidopsis Sequence Match ( AT3G10915.2 )
(BLAST)
001: MDSLSDIDGD FDGRNEGGSS SDYRLLGRQI TVHQFMGGGK AADLLLWRRR HLSLGVIIIS TVAWLIFEFS GLPFLSVSSD VLLIVIMISF VHARVSAFRN
101: RQLHSLPELV LSEEMVNSAA ASFRIKLNHL LVMAHDVTVG NDFRLFFKVV ICLWLLSAIG SYISLCTLLY IGTILSVTIP ALYSKYQSKV DKCCGTIHRR
201: LSHHYKIVDE NVISRLSWSL SKDKDS
Arabidopsis Description
Reticulon-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LP93]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.