Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG93546 | Soybean | plasma membrane | 94.44 | 93.97 |
| Solyc06g049060.2.1 | Tomato | mitochondrion, plasma membrane | 66.16 | 68.95 |
| PGSC0003DMT400042905 | Potato | cytosol, peroxisome, plasma membrane | 68.18 | 56.72 |
| GSMUA_Achr3P09820_001 | Banana | cytosol, peroxisome, plasma membrane | 62.63 | 53.91 |
| Bra034153.1-P | Field mustard | plasma membrane | 57.58 | 51.12 |
| CDY36282 | Canola | plasma membrane | 57.58 | 51.12 |
| EER92307 | Sorghum | peroxisome | 58.59 | 50.88 |
| Os03t0336600-02 | Rice | plasma membrane | 58.59 | 50.22 |
| Zm00001d047517_P001 | Maize | peroxisome | 57.07 | 49.56 |
| TraesCS4D01G171300.2 | Wheat | peroxisome | 56.57 | 49.34 |
| TraesCS4A01G135900.1 | Wheat | peroxisome | 56.57 | 49.34 |
| TraesCS4B01G169100.2 | Wheat | cytosol, peroxisome, vacuole | 56.06 | 48.9 |
| Bra029878.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 58.59 | 48.54 |
| CDY08567 | Canola | cytosol | 58.59 | 48.13 |
| CDY00975 | Canola | cytosol, endoplasmic reticulum, peroxisome | 58.08 | 48.12 |
| AT3G10915.7 | Thale cress | plasma membrane | 57.58 | 45.42 |
| HORVU4Hr1G050020.1 | Barley | plastid | 56.06 | 42.86 |
| KRG91024 | Soybean | plasma membrane | 37.88 | 36.76 |
| KRH35738 | Soybean | endoplasmic reticulum | 37.37 | 36.27 |
| KRH66004 | Soybean | endoplasmic reticulum, golgi, plasma membrane | 35.86 | 33.97 |
| KRH75801 | Soybean | plasma membrane | 34.85 | 33.01 |
| KRH28521 | Soybean | endoplasmic reticulum | 31.31 | 29.25 |
| KRH45979 | Soybean | cytosol, nucleus, plasma membrane | 35.86 | 29.22 |
| KRH76938 | Soybean | endoplasmic reticulum, plasma membrane | 23.74 | 29.19 |
| KRG99174 | Soybean | endoplasmic reticulum, plasma membrane | 12.63 | 28.74 |
| KRH39144 | Soybean | plasma membrane | 31.31 | 27.93 |
| VIT_13s0067g02960.t01 | Wine grape | endoplasmic reticulum, peroxisome, plasma membrane | 45.45 | 27.52 |
| KRH48561 | Soybean | plasma membrane | 30.81 | 27.48 |
| KRH41254 | Soybean | cytosol, nucleus, plasma membrane | 34.34 | 26.77 |
| KRH35899 | Soybean | plasma membrane | 28.28 | 26.42 |
| KRH59988 | Soybean | mitochondrion | 33.84 | 26.38 |
| KRG99024 | Soybean | plasma membrane | 34.85 | 26.14 |
| KRH73588 | Soybean | plasma membrane | 31.82 | 25.71 |
| KRH14529 | Soybean | cytosol, peroxisome, plasma membrane | 31.82 | 25.71 |
| KRH40357 | Soybean | endoplasmic reticulum | 32.32 | 24.9 |
| KRH00872 | Soybean | endoplasmic reticulum | 31.31 | 23.94 |
| KRH06560 | Soybean | endoplasmic reticulum | 30.3 | 23.44 |
| KRH35223 | Soybean | cytosol, nucleus, plasma membrane | 28.79 | 22.8 |
| KRH48008 | Soybean | cytosol, peroxisome, plasma membrane | 31.31 | 19.75 |
| KRH30696 | Soybean | plasma membrane | 21.72 | 17.48 |
| KRG91601 | Soybean | mitochondrion | 28.79 | 16.76 |
Protein Annotations
| EntrezGene:100776757 | MapMan:13.7.2.1 | EMBL:ACUP02008076 | EnsemblPlantsGene:GLYMA_13G062400 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0016020 | GO:GO:0016021 |
| UniProt:I1LWL0 | InterPro:IPR003388 | EnsemblPlants:KRH18469 | ProteinID:KRH18469 | ProteinID:KRH18469.1 | ProteinID:KRH18470.1 |
| PFAM:PF02453 | PFscan:PS50845 | PANTHER:PTHR10994 | PANTHER:PTHR10994:SF67 | InterPro:Reticulon | TMHMM:TMhelix |
| UniParc:UPI0001BA89DB | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr13:+:16011546..16015207
Molecular Weight (calculated)
22513.9 Da
IEP (calculated)
7.985
GRAVY (calculated)
0.590
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MSESEAELPT AFVGDVLLWK RWHVSLGVIV VATVAWVLFE WTSLPFLTIC SDVLLILIVL LFLHANYASL RNKQPPTLPE LVVSEEMVNN VAASFRVKIN
101: NMLLIAHDIT IGKDFRIFFK VVICLWLLSV IGSVFSFFTL AYIGTLMMIT IPALYHKYGG YVDKCCGLIH SQFSKHYRIV DESVFNRLPR NISKDKES
101: NMLLIAHDIT IGKDFRIFFK VVICLWLLSV IGSVFSFFTL AYIGTLMMIT IPALYHKYGG YVDKCCGLIH SQFSKHYRIV DESVFNRLPR NISKDKES
001: MDSLSDIDGD FDGRNEGGSS SDYRLLGRQI TVHQFMGGGK AADLLLWRRR HLSLGVIIIS TVAWLIFEFS GLPFLSVSSD VLLIVIMISF VHARVSAFRN
101: RQLHSLPELV LSEEMVNSAA ASFRIKLNHL LVMAHDVTVG NDFRLFFKVV ICLWLLSAIG SYISLCTLLY IGTILSVTIP ALYSKYQSKV DKCCGTIHRR
201: LSHHYKIVDE NVISRLSWSL SKDKDS
101: RQLHSLPELV LSEEMVNSAA ASFRIKLNHL LVMAHDVTVG NDFRLFFKVV ICLWLLSAIG SYISLCTLLY IGTILSVTIP ALYSKYQSKV DKCCGTIHRR
201: LSHHYKIVDE NVISRLSWSL SKDKDS
Arabidopsis Description
Reticulon-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LP93]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.