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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH73588 Soybean plasma membrane 95.92 95.92
KRH45979 Soybean cytosol, nucleus, plasma membrane 73.88 74.49
VIT_12s0028g01090.t01 Wine grape cytosol, peroxisome, plasma membrane 71.43 70.56
KRG99024 Soybean plasma membrane 73.06 67.8
PGSC0003DMT400002449 Potato cytosol, nucleus, plasma membrane 68.16 65.75
GSMUA_Achr6P04560_001 Banana cytosol, peroxisome, plasma membrane 65.31 64.52
Solyc12g006290.1.1 Tomato nucleus 60.82 63.95
Solyc07g044880.2.1 Tomato mitochondrion 36.73 63.38
EER90788 Sorghum cytosol, nucleus, plasma membrane 61.22 60.73
Os03t0781700-01 Rice cytosol, peroxisome, plasma membrane 61.22 60.73
Zm00001d034313_P001 Maize cytosol, nucleus, plasma membrane 61.22 60.48
Bra029827.1-P Field mustard plasma membrane 56.73 58.16
CDY00916 Canola plasma membrane 56.73 58.16
CDY08616 Canola plasma membrane 56.73 58.16
Os07t0142000-01 Rice plasma membrane 58.37 58.13
GSMUA_Achr9P10200_001 Banana cytosol, peroxisome, plasma membrane 55.51 56.2
TraesCS5B01G420300.1 Wheat cytosol, nucleus, plasma membrane 59.18 55.98
HORVU5Hr1G101680.2 Barley cytosol, endoplasmic reticulum, peroxisome 59.59 55.94
TraesCS5D01G426200.1 Wheat cytosol, peroxisome, plasma membrane 58.78 55.6
TraesCS5A01G418200.1 Wheat cytosol, peroxisome, plasma membrane 59.18 55.56
TraesCS2B01G267800.2 Wheat cytosol, peroxisome, vacuole 55.92 55.47
AT3G10260.3 Thale cress plasma membrane 60.41 55.43
Zm00001d018781_P001 Maize extracellular, mitochondrion 54.69 55.14
TraesCS2D01G254800.1 Wheat cytosol, peroxisome, vacuole 55.51 55.06
TraesCS2A01G254300.1 Wheat cytosol, peroxisome, vacuole 55.1 54.66
PGSC0003DMT400074138 Potato plasma membrane 64.08 52.33
KRH41254 Soybean cytosol, nucleus, plasma membrane 46.53 44.88
KXG34376 Sorghum plasma membrane 57.14 44.59
KRH59988 Soybean mitochondrion 46.12 44.49
KRH06560 Soybean endoplasmic reticulum 44.08 42.19
KRH00872 Soybean endoplasmic reticulum 43.27 40.93
KRH40357 Soybean endoplasmic reticulum 42.86 40.86
CDY56712 Canola mitochondrion 59.18 40.85
CDX82165 Canola endoplasmic reticulum, peroxisome, plasma membrane, plastid 40.0 39.52
KRH39144 Soybean plasma membrane 35.1 38.74
KRG91024 Soybean plasma membrane 32.24 38.73
KRH35899 Soybean plasma membrane 33.06 38.21
KRH48561 Soybean plasma membrane 34.29 37.84
KRH35738 Soybean endoplasmic reticulum 31.43 37.75
HORVU2Hr1G060770.16 Barley plasma membrane 55.1 35.25
KRH35223 Soybean cytosol, nucleus, plasma membrane 35.51 34.8
KRH48008 Soybean cytosol, peroxisome, plasma membrane 44.49 34.71
KRH75801 Soybean plasma membrane 28.57 33.49
KRH66004 Soybean endoplasmic reticulum, golgi, plasma membrane 28.16 33.01
KRH28521 Soybean endoplasmic reticulum 28.16 32.55
KRG99174 Soybean endoplasmic reticulum, plasma membrane 11.43 32.18
KRG93546 Soybean plasma membrane 26.12 32.16
KRH18469 Soybean plasma membrane 25.71 31.82
KRH30696 Soybean plasma membrane 30.2 30.08
KRH76938 Soybean endoplasmic reticulum, plasma membrane 17.96 27.33
KRG91601 Soybean mitochondrion 35.1 25.29
Protein Annotations
MapMan:13.7.2.1EMBL:ACUP02008504EnsemblPlantsGene:GLYMA_14G031900GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0016020GO:GO:0016021UniProt:I1M713
InterPro:IPR003388EnsemblPlants:KRH14529ProteinID:KRH14529ProteinID:KRH14529.1PFAM:PF02453PFscan:PS50845
PANTHER:PTHR10994PANTHER:PTHR10994:SF62InterPro:ReticulonTMHMM:TMhelixUniParc:UPI000233B425SEG:seg
Description
hypothetical protein
Coordinates
chr14:+:2322547..2326398
Molecular Weight (calculated)
27552.7 Da
IEP (calculated)
10.024
GRAVY (calculated)
0.148
Length
245 amino acids
Sequence
(BLAST)
001: MSEKITAEKL LNTLVETLTE KQKSGLFFEE DKSSSVSSQF NRLFGRQKPV HHILGGGKSA DVLLWRNKKI SASVLSAATA IWVLFEWLNY NFLTILFFVV
101: ALGMLGQFLW TNASGLFSRK PSKVPRFVLP DGIFVNIATA VGAEVNRGLR FLQDVSCGGN LKQFLIVIVS LWAGAVIGSW CNFLTVMYIG FVAAHTLPVL
201: YERYEDQVDN FVYKVFDQLQ NHYQKLDTGL LSKIPKGKLK GKKYE
Best Arabidopsis Sequence Match ( AT3G10260.3 )
(BLAST)
001: MKSTFICKLS NLRFRLCFRI MPDKNIVEDV IGDLVDNFTE TVQKNKHGSS FFEQEDSVSS RFNRLFDRQK PIHHVLGGGK SADVLLWRNK KISASVLMGA
101: TAIWVLFEWI NFHFLSLVCY ALLLGMIAQF VWSNASGFLN RSQSRVPRLV LPKDFFAEVG VAVGKEVNRG LLFLQDLACK GNLKQFLMAV IGLWVAAMVG
201: SCCNFLTVLY IGFVGAHTMP VLYERYEDEV DGFMDSMIMK FHSHYKKLDT GFLSRIPSGK FGLKKRE
Arabidopsis Description
Reticulon family protein [Source:TAIR;Acc:AT3G10260]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.