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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • nucleus 2
  • cytosol 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:nucleus
 endoplasmic reticulum: 27224218
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH40357 Soybean endoplasmic reticulum 93.82 94.55
KRG99174 Soybean endoplasmic reticulum, plasma membrane 30.5 90.8
KRH06560 Soybean endoplasmic reticulum 74.9 75.78
KRH59988 Soybean mitochondrion 69.5 70.87
KRH41254 Soybean cytosol, nucleus, plasma membrane 69.11 70.47
Solyc01g095200.2.1 Tomato plastid 70.66 69.58
PGSC0003DMT400000230 Potato cytosol, nucleus, plasma membrane 70.66 69.06
PGSC0003DMT400049928 Potato cytosol, nucleus, plasma membrane 67.95 69.02
Solyc10g011870.2.1 Tomato cytosol, nucleus, plasma membrane 68.73 67.68
Bra004562.1-P Field mustard cytosol, peroxisome, plasma membrane 65.25 67.33
CDX79993 Canola cytosol, peroxisome, plasma membrane 65.25 67.33
CDY42012 Canola cytosol, peroxisome, plasma membrane 64.48 66.53
CDY52012 Canola cytosol, peroxisome, plasma membrane 64.48 65.75
GSMUA_Achr8P27830_001 Banana cytosol, peroxisome, plasma membrane 63.32 65.34
Os01t0736900-01 Rice plasma membrane 63.32 64.82
AT2G46170.1 Thale cress cytosol, nucleus, plasma membrane 63.71 64.71
Os01t0226300-01 Rice plasma membrane 44.4 64.61
Zm00001d043551_P003 Maize plasma membrane 64.09 64.59
Bra003455.1-P Field mustard cytosol, peroxisome, plasma membrane 63.32 64.57
CDY53913 Canola cytosol, peroxisome, plasma membrane 63.32 64.57
GSMUA_AchrUn_... Banana cytosol, nucleus, plasma membrane 64.09 64.34
TraesCS1D01G349700.1 Wheat cytosol, nucleus, plasma membrane 61.39 64.11
KXG33320 Sorghum cytosol, nucleus, plasma membrane 63.71 63.95
TraesCS1B01G360800.1 Wheat cytosol, nucleus, plasma membrane 61.39 63.86
Os05t0526400-01 Rice plasma membrane 61.78 63.74
AT3G61560.1 Thale cress cytosol, nucleus, plasma membrane 61.78 63.24
EES19841 Sorghum cytosol, nucleus, plasma membrane 62.16 63.14
GSMUA_Achr9P05440_001 Banana nucleus, peroxisome, plasma membrane 61.0 62.95
Zm00001d012776_P001 Maize extracellular 61.39 62.85
KRH48008 Soybean cytosol, peroxisome, plasma membrane 76.06 62.74
GSMUA_Achr10P... Banana cytosol, endoplasmic reticulum, plasma membrane 61.0 62.7
GSMUA_Achr5P06850_001 Banana cytosol, nucleus, plasma membrane 60.23 62.4
TraesCS3A01G278800.1 Wheat golgi 59.46 62.1
TraesCS3B01G313000.1 Wheat cytosol, nucleus, plasma membrane 60.62 62.06
GSMUA_Achr6P31860_001 Banana cytosol, nucleus, plasma membrane 60.23 61.9
Zm00001d038768_P001 Maize extracellular, mitochondrion 60.62 61.81
TraesCS3D01G279100.1 Wheat cytosol, nucleus, plasma membrane 59.07 61.69
HORVU3Hr1G069970.2 Barley cytosol, nucleus, plasma membrane 60.62 61.57
GSMUA_Achr3P31920_001 Banana cytosol 50.58 59.82
GSMUA_Achr4P08400_001 Banana cytosol 57.92 59.29
KRH35223 Soybean cytosol, nucleus, plasma membrane 55.21 57.2
Zm00001d008982_P001 Maize cytosol, nucleus, plasma membrane 61.39 56.99
KXG31516 Sorghum cytosol, nucleus, plasma membrane 61.78 56.34
TraesCS3D01G159100.1 Wheat cytosol, nucleus, plasma membrane 61.39 55.59
TraesCS3B01G178100.1 Wheat cytosol, nucleus, plasma membrane 61.39 55.59
Zm00001d020229_P001 Maize plasma membrane 31.66 53.95
Os02t0265900-01 Rice cytosol, peroxisome, plasma membrane 47.1 53.04
Zm00001d020729_P001 Maize plasma membrane 19.3 52.63
Zm00001d039316_P001 Maize cytosol, nucleus, plasma membrane 62.16 52.61
VIT_02s0025g00590.t01 Wine grape mitochondrion 11.97 51.67
TraesCS1A01G346800.3 Wheat plasma membrane 50.19 51.59
AT4G01230.2 Thale cress cytosol 47.49 50.41
HORVU3Hr1G030760.2 Barley mitochondrion 61.0 50.32
Zm00001d016041_P001 Maize extracellular 44.4 50.0
HORVU1Hr1G082010.3 Barley cytosol, nucleus, plasma membrane, plastid 50.19 49.81
Bra037369.1-P Field mustard cytosol 46.72 49.79
CDY07184 Canola cytosol, peroxisome, plasma membrane 46.72 49.79
CDY48510 Canola cytosol 46.72 49.79
TraesCS3A01G151200.1 Wheat cytosol, peroxisome, plasma membrane 61.78 49.69
EER89811 Sorghum peroxisome 47.88 48.44
OQU84758 Sorghum cytosol, peroxisome, plasma membrane 43.24 48.28
Zm00001d037453_P001 Maize cytosol, peroxisome, plasma membrane 47.49 47.13
TraesCS7A01G341800.1 Wheat cytosol, peroxisome, plasma membrane, plastid 47.1 46.92
TraesCS7B01G241100.1 Wheat cytosol, peroxisome, plasma membrane, plastid 47.1 46.92
TraesCS7D01G337800.1 Wheat cytosol, peroxisome, plasma membrane, plastid 47.1 46.92
Os06t0503400-01 Rice plasma membrane 46.72 45.66
KRH45979 Soybean cytosol, nucleus, plasma membrane 41.31 44.03
KRH14529 Soybean cytosol, peroxisome, plasma membrane 40.93 43.27
HORVU7Hr1G081290.4 Barley plastid 37.84 42.42
KRH73588 Soybean plasma membrane 39.38 41.63
KRG91601 Soybean mitochondrion 54.44 41.47
GSMUA_Achr3P15760_001 Banana cytosol 23.94 41.33
KRH48561 Soybean plasma membrane 35.14 40.99
KRH39144 Soybean plasma membrane 35.14 40.99
KRH35899 Soybean plasma membrane 33.2 40.57
HORVU7Hr1G075700.2 Barley mitochondrion 46.72 40.33
KRG99024 Soybean plasma membrane 40.15 39.39
KRG91024 Soybean plasma membrane 30.12 38.24
KRH66004 Soybean endoplasmic reticulum, golgi, plasma membrane 29.73 36.84
KRH35738 Soybean endoplasmic reticulum 28.96 36.76
KRH30696 Soybean plasma membrane 33.2 34.96
KRH75801 Soybean plasma membrane 28.19 34.93
CDX89122 Canola extracellular, mitochondrion 19.3 32.68
KRH18469 Soybean plasma membrane 23.94 31.31
KRG93546 Soybean plasma membrane 23.94 31.16
KRH28521 Soybean endoplasmic reticulum 24.71 30.19
KRH76938 Soybean endoplasmic reticulum, plasma membrane 16.99 27.33
Protein Annotations
EntrezGene:100778096MapMan:13.7.2.1EMBL:ACUP02011481EMBL:BT096699UniProt:C6TGE9EnsemblPlantsGene:GLYMA_18G239300
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789
GO:GO:0016020GO:GO:0016021InterPro:IPR003388EnsemblPlants:KRH00872ProteinID:KRH00872ProteinID:KRH00872.1
PFAM:PF02453PFscan:PS50845PANTHER:PTHR10994PANTHER:PTHR10994:SF70InterPro:ReticulonTMHMM:TMhelix
UniParc:UPI00001AB8CBSEG:seg::::
Description
hypothetical protein
Coordinates
chr18:-:52810679..52813112
Molecular Weight (calculated)
28807.1 Da
IEP (calculated)
7.367
GRAVY (calculated)
0.207
Length
259 amino acids
Sequence
(BLAST)
001: MAEEPESTVT NGAADESLLD KITEKLHGHD SSSSSSSDSD SDSEKTVTSS VKDKVFRLFG RERPVHSVFG AGKPADVLLW RNKKISAGML GGATAVWVLF
101: ELLEYHLLTL VCHILILLLA VLFLWSNAHT FIHKSPPRIP EFHLPEEPFL QVASALRIEV NRGFAVLHSI GSGRDLKKFL VVIASVWILS IVGNWCNFLT
201: LFYITFILLH TVPVLYEKYD DKIDPLAEKA VIEIKKQYAV FDAKVLSKIP LGPLKAKLS
Best Arabidopsis Sequence Match ( AT1G64090.1 )
(BLAST)
001: MAEEHKHEES IMEKISEKIH GHDDSSSSSS DSDDDKNSAS LKTKIYRLFG REQPLHKLFG GGKPADIFLW RNKKVSGGVL GAATVSWILF ELLEYNLLTL
101: FGHISILALA VLFLWSSAST FIHKSPLHIP EVHIPEDVVL QLASGLRIEI NRGFTVLRDI ASGRDLKKFL LVIAGLWVLS KVGSSCNFLT LIYIATVLLF
201: TIPVLYEKYE DKVDDFGEKA MREIKKQYVE FDVKVLSKVM SKIPKGAFAF IKKKD
Arabidopsis Description
RTNLB3Reticulon-like protein [Source:UniProtKB/TrEMBL;Acc:F4I596]
SUBAcon: [endoplasmic reticulum,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.