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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, nucleus, plasma membrane

Predictor Summary:
  • nucleus 2
  • peroxisome 1
  • plasma membrane 3
  • plastid 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus, peroxisome, plasma membrane
Any Predictor:nucleus, peroxisome, plastid, secretory
BaCelLo:nucleus
MultiLoc:peroxisome
Plant-mPloc:plasma membrane, plastid
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr1P00860_001
GSMUA_Achr1P04070_001
GSMUA_Achr1P24970_001
GSMUA_Achr1P25230_001
GSMUA_Achr2P07050_001
GSMUA_Achr3P15760_001
GSMUA_Achr3P31920_001
GSMUA_Achr4P08400_001
GSMUA_Achr4P16430_001
GSMUA_Achr4P20820_001
GSMUA_Achr4P22340_001
GSMUA_Achr4P27140_001
GSMUA_Achr4P30410_001
GSMUA_Achr5P06850_001
GSMUA_Achr5P15070_001
GSMUA_Achr5P23170_001
GSMUA_Achr6P31860_001
GSMUA_Achr6P34270_001
GSMUA_Achr7P01900_001
GSMUA_Achr7P09070_001
GSMUA_Achr7P17170_001
GSMUA_Achr7P17180_001
GSMUA_Achr7P18540_001
GSMUA_Achr8P00730_001
GSMUA_Achr8P02620_001
GSMUA_Achr8P27830_001
GSMUA_Achr8P29730_001
GSMUA_Achr8P29900_001
GSMUA_Achr9P03220_001
GSMUA_Achr9P05440_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G11220.1 GSMUA_Achr1P24970_001 AT1G09330.1 21798944
AT4G11220.1 GSMUA_Achr2P07050_001 AT1G09330.1 21798944
AT4G11220.1 GSMUA_Achr8P29900_001 AT1G09330.1 21798944
AT4G11220.1 GSMUA_Achr4P22340_001 AT3G59500.1 21798944
AT4G11220.1 GSMUA_Achr5P15070_001 AT3G59500.1 21798944
AT5G41600.1 GSMUA_Achr7P09070_001 AT1G55190.1 21798944
AT5G41600.1 GSMUA_Achr10P... AT1G77350.1 21798944
AT5G41600.1 GSMUA_Achr4P16430_001 AT2G03120.1 21798944
AT5G41600.1 GSMUA_Achr5P23170_001 AT2G39960.1 21798944
AT5G41600.1 GSMUA_Achr7P18540_001 AT2G39960.1 21798944
AT5G41600.1 GSMUA_Achr1P00860_001 AT2G46890.1 21798944
AT5G41600.1 GSMUA_Achr1P25230_001 AT3G02420.1 21798944
AT5G41600.1 GSMUA_Achr7P17170_001 AT3G02420.1 21798944
AT5G41600.1 GSMUA_Achr7P17180_001 AT3G02420.1 21798944
AT5G41600.1 GSMUA_Achr8P29730_001 AT3G02420.1 21798944
AT5G41600.1 GSMUA_Achr4P20820_001 AT3G07950.1 21798944
AT5G41600.1 GSMUA_Achr7P01900_001 AT3G07950.1 21798944
AT5G41600.1 GSMUA_Achr8P00730_001 AT3G27080.1 21798944
AT5G41600.1 GSMUA_Achr10P... AT3G46060.1 21798944
AT5G41600.1 GSMUA_Achr10P... AT3G46060.1 21798944
AT5G41600.1 GSMUA_Achr11P... AT3G46060.1 21798944
AT5G41600.1 GSMUA_Achr6P34270_001 AT3G46060.1 21798944
AT5G41600.1 GSMUA_Achr8P02620_001 AT3G46060.1 21798944
AT5G41600.1 GSMUA_Achr9P03220_001 AT3G46060.1 21798944
AT5G41600.1 GSMUA_AchrUn_... AT3G46060.1 21798944
AT5G41600.1 GSMUA_Achr4P22340_001 AT3G59500.1 21798944
AT5G41600.1 GSMUA_Achr5P15070_001 AT3G59500.1 21798944
AT5G41600.1 GSMUA_Achr10P... AT5G41600.1 21798944
AT5G41600.1 GSMUA_Achr3P15760_001 AT5G41600.1 21798944
AT5G41600.1 GSMUA_Achr3P31920_001 AT5G41600.1 21798944
AT5G41600.1 GSMUA_Achr4P08400_001 AT5G41600.1 21798944
AT5G41600.1 GSMUA_Achr5P06850_001 AT5G41600.1 21798944
AT5G41600.1 GSMUA_Achr6P31860_001 AT5G41600.1 21798944
AT5G41600.1 GSMUA_Achr8P27830_001 AT5G41600.1 21798944
AT5G41600.1 GSMUA_Achr9P05440_001 AT5G41600.1 21798944
AT5G41600.1 GSMUA_AchrUn_... AT5G41600.1 21798944
AT5G41600.1 GSMUA_Achr11P... AT5G53560.1 21798944
AT5G41600.1 GSMUA_Achr1P04070_001 AT5G53560.1 21798944
AT5G41600.1 GSMUA_Achr4P27140_001 AT5G53560.1 21798944
AT5G41600.1 GSMUA_Achr4P30410_001 AT5G53560.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr8P27830_001 Banana cytosol, peroxisome, plasma membrane 86.85 86.85
GSMUA_Achr6P31860_001 Banana cytosol, nucleus, plasma membrane 85.66 85.32
GSMUA_AchrUn_... Banana cytosol, nucleus, plasma membrane 77.69 75.58
GSMUA_Achr3P31920_001 Banana cytosol 62.55 71.69
GSMUA_Achr4P08400_001 Banana cytosol 71.31 70.75
VIT_02s0025g00640.t01 Wine grape cytosol, nucleus, plasma membrane 69.32 69.05
VIT_15s0046g01760.t01 Wine grape cytosol, peroxisome, plasma membrane 69.72 68.63
KRH41254 Soybean cytosol, nucleus, plasma membrane 68.53 67.72
KRH59988 Soybean mitochondrion 68.13 67.32
PGSC0003DMT400049928 Potato cytosol, nucleus, plasma membrane 66.93 65.88
Solyc01g095200.2.1 Tomato plastid 68.53 65.4
PGSC0003DMT400000230 Potato cytosol, nucleus, plasma membrane 68.92 65.28
Solyc03g007740.2.1 Tomato nucleus 66.14 65.1
GSMUA_Achr10P... Banana cytosol, endoplasmic reticulum, plasma membrane 64.94 64.68
PGSC0003DMT400051387 Potato cytosol, nucleus, plasma membrane 65.34 64.31
Solyc10g011870.2.1 Tomato cytosol, nucleus, plasma membrane 67.33 64.26
CDY25557 Canola cytosol, endoplasmic reticulum, nucleus 63.35 63.35
Bra027678.1-P Field mustard cytosol, endoplasmic reticulum, nucleus 62.95 62.95
KRH06560 Soybean endoplasmic reticulum 63.74 62.5
CDY34396 Canola cytosol, endoplasmic reticulum, nucleus 62.15 62.15
Solyc06g036430.2.1 Tomato cytosol, nucleus, plasma membrane 62.55 62.06
CDY38194 Canola cytosol, nucleus, plasma membrane 61.75 62.0
CDY08353 Canola cytosol, endoplasmic reticulum, nucleus 61.75 62.0
KRH40357 Soybean endoplasmic reticulum 62.95 61.48
AT5G41600.1 Thale cress cytosol, nucleus, plasma membrane 62.95 61.48
Bra004562.1-P Field mustard cytosol, peroxisome, plasma membrane 61.35 61.35
CDX79993 Canola cytosol, peroxisome, plasma membrane 61.35 61.35
PGSC0003DMT400074360 Potato cytosol, nucleus, plasma membrane 61.75 61.26
Bra027757.1-P Field mustard cytosol, endoplasmic reticulum, peroxisome 60.96 61.2
PGSC0003DMT400032086 Potato cytosol, nucleus, plasma membrane 65.74 61.11
KRH00872 Soybean endoplasmic reticulum 62.95 61.0
CDY52012 Canola cytosol, peroxisome, plasma membrane 61.35 60.63
CDY42012 Canola cytosol, peroxisome, plasma membrane 60.56 60.56
Solyc08g081730.2.1 Tomato endoplasmic reticulum, plastid 64.94 60.37
AT4G23630.2 Thale cress nucleus 65.74 60.0
GSMUA_Achr5P06850_001 Banana cytosol, nucleus, plasma membrane 59.76 60.0
Bra000739.1-P Field mustard cytosol 63.74 59.93
CDY53913 Canola cytosol, peroxisome, plasma membrane 60.56 59.84
Bra003455.1-P Field mustard cytosol, peroxisome, plasma membrane 60.56 59.84
CDX90792 Canola cytosol, peroxisome, plasma membrane 63.35 59.55
AT2G46170.1 Thale cress cytosol, nucleus, plasma membrane 60.16 59.22
Bra019285.1-P Field mustard cytosol 62.95 58.96
AT3G61560.1 Thale cress cytosol, nucleus, plasma membrane 59.36 58.89
CDY44123 Canola cytosol, nucleus, plasma membrane 64.54 58.7
VIT_16s0050g01790.t01 Wine grape cytosol, nucleus, plasma membrane 59.36 58.66
KRG99174 Soybean endoplasmic reticulum, plasma membrane 20.32 58.62
CDY10954 Canola cytosol 62.95 58.52
Bra013717.1-P Field mustard nucleus 64.14 58.33
CDY41666 Canola cytosol 64.14 58.33
AT4G11220.1 Thale cress nucleus 62.95 58.3
CDY57657 Canola cytosol, nucleus, plasma membrane 63.74 58.18
CDY24806 Canola cytosol 63.35 58.03
Bra010539.1-P Field mustard cytosol 62.15 57.99
CDY13240 Canola cytosol, peroxisome, plasma membrane 37.05 57.76
AT1G64090.2 Thale cress cytosol, endoplasmic reticulum, nucleus 61.75 57.2
CDY62522 Canola cytosol 17.53 55.0
KRH35223 Soybean cytosol, nucleus, plasma membrane 54.18 54.4
KRH48008 Soybean cytosol, peroxisome, plasma membrane 66.93 53.5
GSMUA_Achr10P... Banana golgi, peroxisome, plasma membrane 52.19 52.82
GSMUA_Achr6P15870_001 Banana golgi, peroxisome, plasma membrane 51.79 52.42
GSMUA_Achr5P07570_001 Banana golgi, peroxisome, plasma membrane 50.6 51.21
GSMUA_Achr3P15760_001 Banana cytosol 30.28 50.67
GSMUA_Achr10P... Banana cytosol, endoplasmic reticulum, peroxisome 39.84 50.51
VIT_02s0025g00590.t01 Wine grape mitochondrion 11.95 50.0
CDY05135 Canola mitochondrion 62.15 49.84
AT4G01230.2 Thale cress cytosol 46.22 47.54
Bra037369.1-P Field mustard cytosol 45.02 46.5
CDY48510 Canola cytosol 45.02 46.5
CDY07184 Canola cytosol, peroxisome, plasma membrane 45.02 46.5
GSMUA_Achr6P04560_001 Banana cytosol, peroxisome, plasma membrane 41.83 42.34
GSMUA_Achr8P31770_001 Banana peroxisome 35.86 40.36
GSMUA_Achr9P10200_001 Banana cytosol, peroxisome, plasma membrane 38.25 39.67
Bra035242.1-P Field mustard cytosol 31.47 39.5
KRG91601 Soybean mitochondrion 52.59 38.82
CDX86802 Canola cytosol, nucleus, peroxisome 37.45 38.37
GSMUA_Achr2P07230_001 Banana golgi, plasma membrane, vacuole 31.47 37.62
VIT_07s0031g02730.t01 Wine grape golgi, mitochondrion, nucleus, plasma membrane 25.1 35.0
GSMUA_Achr3P09820_001 Banana cytosol, peroxisome, plasma membrane 31.47 34.35
GSMUA_Achr7P05440_001 Banana peroxisome, plasma membrane, vacuole 30.28 34.08
GSMUA_Achr10P... Banana plasma membrane 28.29 30.87
CDX89122 Canola extracellular, mitochondrion 18.73 30.72
GSMUA_Achr8P02250_001 Banana cytosol, mitochondrion, peroxisome, plasma membrane 27.49 27.94
GSMUA_Achr4P20190_001 Banana cytosol, plastid 30.68 27.3
GSMUA_Achr6P33560_001 Banana plasma membrane 28.29 26.89
GSMUA_AchrUn_... Banana golgi 34.66 24.72
Protein Annotations
EnsemblPlants:GSMUA_Achr9P05440_001EnsemblPlants:GSMUA_Achr9T05440_001EnsemblPlantsGene:GSMUA_Achr9G05440_001GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0016020GO:GO:0016021InterPro:IPR003388
InterPro:ReticulonPANTHER:PTHR10994PANTHER:PTHR10994:SF99PFAM:PF02453PFscan:PS50845SEG:seg
TMHMM:TMhelixUniParc:UPI000295B7EFUniProt:M0TXQ3MapMan:13.7.2.1::
Description
Reticulon-like protein B2 [Source:GMGC_GENE;Acc:GSMUA_Achr9G05440_001]
Coordinates
chr9:-:3507396..3509321
Molecular Weight (calculated)
28106.3 Da
IEP (calculated)
8.226
GRAVY (calculated)
0.128
Length
251 amino acids
Sequence
(BLAST)
001: MAEHGEETLI EQINEKIHGD GDSSSSDSDD EKSKASVVAE AVKSKIYHLF GREKPVHQIL GGGKPADVFL WKNKKASAVV LGGATAIWIL FELMEYHLLT
101: LVCHCLILSL AILFLWSNAT TLINKSPPHI PVVSIPEDLA VNISRSLTYE INRGFSVLRE IATGRELKKF LAVIAGLWIL SIIGSCCNFL TLFYIAFVTL
201: HTVPFLYDKY EDRVDTFAEK ATVEFKKHYA VFHAKCLSKI PRGPLKDKKF R
Best Arabidopsis Sequence Match ( AT4G11220.1 )
(BLAST)
001: MADEHKHEES SPNLDPAVEV VERESLMEKL SEKIHHKGDS SSSSSSDDEN EKKSSSSSPK SLKSKVYRLF GRERPVHKVL GGGKPADIFM WKDKKMSGGV
101: FGGATVAWVL FELMEYHLLT LLCHVMIVAL AVLFLWSNAT MFIHKSPPKI PEVHIPEEPL LQLASGLRIE INRGISSLRE IASGRDIKKF LSAIAGLWVL
201: SILGGCYSFL TLAYIALVLL FTVPLFYDKY EDKVDSYGEK AMAELKKQYA VLDAKVFSKI PRGPLKDKKK D
Arabidopsis Description
RTNLB2Reticulon-like protein B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUT9]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.