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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, nucleus
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:mitochondrion
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr3P26350_001
GSMUA_Achr8P03880_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G02420.1 GSMUA_Achr3P26350_001 AT5G49540.1 21798944
AT3G02420.1 GSMUA_Achr8P03880_001 AT5G49540.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc02g089780.2.1 Tomato cytosol 48.45 38.84
GSMUA_Achr8P29730_001 Banana cytosol 64.95 18.31
GSMUA_Achr1P25230_001 Banana cytosol, endoplasmic reticulum, peroxisome 63.92 17.42
Solyc03g045090.2.1 Tomato nucleus, unclear 61.86 17.34
PGSC0003DMT400048302 Potato cytosol 60.82 16.95
VIT_14s0083g00300.t01 Wine grape cytosol 58.76 16.76
PGSC0003DMT400026189 Potato cytosol, nucleus, peroxisome 57.73 16.14
AT3G02420.1 Thale cress cytosol, endoplasmic reticulum, peroxisome 56.7 15.8
KRG93820 Soybean cytosol, nucleus, plastid 51.55 15.77
Bra021462.1-P Field mustard cytosol 54.64 15.45
Os01t0604700-01 Rice cytosol, peroxisome, plastid 51.55 14.12
EES03240 Sorghum cytosol, peroxisome, plastid 51.55 14.12
KRH18270 Soybean endoplasmic reticulum 55.67 13.64
TraesCS3B01G246200.2 Wheat cytosol, peroxisome, plastid 48.45 13.43
TraesCS3A01G215100.1 Wheat cytosol, peroxisome, plastid 47.42 13.14
Zm00001d044412_P001 Maize cytosol, nucleus, peroxisome 51.55 12.29
HORVU3Hr1G052820.4 Barley mitochondrion, peroxisome 47.42 12.14
GSMUA_Achr7P17170_001 Banana plastid 12.37 4.14
Protein Annotations
EnsemblPlants:GSMUA_Achr7P17180_001EnsemblPlants:GSMUA_Achr7T17180_001EnsemblPlantsGene:GSMUA_Achr7G17180_001PANTHER:PTHR30603PANTHER:PTHR30603:SF18SEG:seg
UniParc:UPI000295DDF4UniProt:M0TIA5MapMan:35.2:::
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G17180_001]
Coordinates
chr7:-:18825749..18831131
Molecular Weight (calculated)
11395.4 Da
IEP (calculated)
5.110
GRAVY (calculated)
-0.756
Length
97 amino acids
Sequence
(BLAST)
1: MGEEEGDPQR LKTTAAAAYD YDNDPRWAEY WSNILIPPHM AARSDVVDHF KRKFYQRFIQ GHEIESCLNY FLTDNITCLT LKPPKEQNKS LYNDILP
Best Arabidopsis Sequence Match ( AT3G02420.1 )
(BLAST)
001: MAEGGEDSQR LKKIAAAAFD YENDARWADY WSNILIPPHM ASRPEVVDHF KRKFYQRYID PDLVVEPMST SSSSSQSARP TATSASSTAS SNANEQVRSR
101: NSGSVPRTSG PSATTGATPS SMRWDEQTIQ FSVNAWVFVI AVLAVLPLIP KNLSNRAYRL SFMGTACSSL YSLYSLYGRP RAWNMQGLQV YFQSIVAAKD
201: FIYFIYCLTF VTSHLCLKFA LIPILCRALE QVAKFLRRNF GRSTIYRKYL EDPCVWVESN TTTLNILSSQ AEIAIGFLLI ISLLSWQRNI IQTFMYWQLL
301: KLMYQAPVTA GYHQSTWSRI GRTVTPIIQR YAPFLNTPVS AVQRWWFR
Arabidopsis Description
AT3g02420/F16B3_5 [Source:UniProtKB/TrEMBL;Acc:Q9M898]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.