Factsheet for AT3G02420.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, peroxisome

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
endoplasmic reticulum 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, peroxisome
Any Predictor:	cytosol, endoplasmic reticulum, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra021462.1-P	Field mustard	cytosol	86.21	87.46
VIT_14s0083g00300.t01	Wine grape	cytosol	75.57	77.35
Solyc02g089780.2.1	Tomato	cytosol	25.86	74.38
Solyc03g045090.2.1	Tomato	nucleus, unclear	73.56	73.99
PGSC0003DMT400026189	Potato	cytosol, nucleus, peroxisome	73.56	73.78
PGSC0003DMT400048302	Potato	cytosol	73.28	73.28
GSMUA_Achr8P29730_001	Banana	cytosol	66.09	66.86
KRG93820	Soybean	cytosol, nucleus, plastid	60.06	65.93
GSMUA_Achr1P25230_001	Banana	cytosol, endoplasmic reticulum, peroxisome	64.37	62.92
KRH18270	Soybean	endoplasmic reticulum	71.55	62.88
EES03240	Sorghum	cytosol, peroxisome, plastid	62.07	61.02
Zm00001d039182_P001	Maize	extracellular, plasma membrane	60.63	60.81
Os01t0604700-01	Rice	cytosol, peroxisome, plastid	61.78	60.73
GSMUA_Achr7P17170_001	Banana	plastid	50.57	60.69
Os05t0589000-02	Rice	plasma membrane	61.21	60.68
EES18791	Sorghum	cytosol, endoplasmic reticulum, peroxisome	60.34	60.0
TraesCS3A01G215100.1	Wheat	cytosol, peroxisome, plastid	60.06	59.71
HORVU2Hr1G063710.1	Barley	extracellular, golgi, mitochondrion, plastid	32.47	59.16
TraesCS3B01G246200.2	Wheat	cytosol, peroxisome, plastid	59.48	59.14
TraesCS1A01G429400.1	Wheat	cytosol, peroxisome, plasma membrane	58.62	58.96
TraesCS1B01G464300.1	Wheat	cytosol	58.62	58.45
TraesCS1D01G439000.1	Wheat	cytosol	59.2	58.36
GSMUA_Achr7P17180_001	Banana	cytosol, mitochondrion, nucleus	15.8	56.7
HORVU2Hr1G063720.1	Barley	plastid	44.25	56.0
HORVU2Hr1G067170.1	Barley	golgi, mitochondrion, plasma membrane, plastid	25.29	55.7
HORVU4Hr1G007060.2	Barley	cytosol, plastid	52.59	54.46
HORVU1Hr1G093680.1	Barley	extracellular, golgi	12.36	54.43
HORVU3Hr1G052820.4	Barley	mitochondrion, peroxisome	59.2	54.35
HORVU5Hr1G029200.4	Barley	cytosol	54.6	54.13
HORVU6Hr1G054760.4	Barley	cytosol	40.52	53.41
Zm00001d044412_P001	Maize	cytosol, nucleus, peroxisome	62.36	53.32
HORVU1Hr1G093720.5	Barley	plastid	59.2	52.82
Os01t0641700-01	Rice	plastid	39.37	50.93
HORVU3Hr1G077290.1	Barley	extracellular, golgi, mitochondrion, plastid	27.3	50.53
HORVU3Hr1G077280.2	Barley	mitochondrion	29.02	49.51
HORVU1Hr1G095120.1	Barley	extracellular	4.6	48.48
HORVU3Hr1G044700.1	Barley	cytosol	31.32	46.78
EES03339	Sorghum	plastid	44.25	45.97
TraesCS3A01G230700.1	Wheat	plastid	39.66	45.7
TraesCS3D01G222600.1	Wheat	plastid	39.66	45.7
TraesCS3B01G260000.1	Wheat	plasma membrane	39.66	43.53
Zm00001d044089_P002	Maize	plastid	41.95	40.9

Protein Annotations

MapMan:35.2	EntrezGene:821152	ProteinID:AAF32449.1	ProteinID:AEE73806.1	EMBL:AF380625	ProteinID:ANM66006.1
ArrayExpress:AT3G02420	EnsemblPlantsGene:AT3G02420	RefSeq:AT3G02420	TAIR:AT3G02420	RefSeq:AT3G02420-TAIR-G	EnsemblPlants:AT3G02420.1
TAIR:AT3G02420.1	EMBL:AY056084	EMBL:AY085605	Unigene:At.24531	GO:GO:0003674	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0008150	GO:GO:0009506
GO:GO:0016020	GO:GO:0016021	RefSeq:NP_001327933.1	RefSeq:NP_566171.1	ProteinID:OAP02553.1	PFAM:PF03661
PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293	PO:PO:0001016
PO:PO:0001017	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507
PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123
PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100
PO:PO:0020137	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	PANTHER:PTHR30603	PANTHER:PTHR30603:SF18
UniProt:Q9M898	InterPro:TMEM33/Pom33	TMHMM:TMhelix	UniParc:UPI00000A02E9	SEG:seg	:

Description

AT3g02420/F16B3_5 [Source:UniProtKB/TrEMBL;Acc:Q9M898]

Coordinates

chr3:-:495884..498964

Molecular Weight (calculated)

39613.5 Da

IEP (calculated)

9.939

GRAVY (calculated)

-0.070

Length

348 amino acids

Sequence
(BLAST)

001: MAEGGEDSQR LKKIAAAAFD YENDARWADY WSNILIPPHM ASRPEVVDHF KRKFYQRYID PDLVVEPMST SSSSSQSARP TATSASSTAS SNANEQVRSR
101: NSGSVPRTSG PSATTGATPS SMRWDEQTIQ FSVNAWVFVI AVLAVLPLIP KNLSNRAYRL SFMGTACSSL YSLYSLYGRP RAWNMQGLQV YFQSIVAAKD
201: FIYFIYCLTF VTSHLCLKFA LIPILCRALE QVAKFLRRNF GRSTIYRKYL EDPCVWVESN TTTLNILSSQ AEIAIGFLLI ISLLSWQRNI IQTFMYWQLL
301: KLMYQAPVTA GYHQSTWSRI GRTVTPIIQR YAPFLNTPVS AVQRWWFR

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.