Factsheet for HORVU3Hr1G044700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G084220.5

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G02420.1	HORVU1Hr1G084220.5	AT5G49540.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G095120.1	Barley	extracellular	12.88	90.91
HORVU1Hr1G093680.1	Barley	extracellular, golgi	23.61	69.62
HORVU6Hr1G054760.4	Barley	cytosol	66.95	59.09
HORVU4Hr1G007060.2	Barley	cytosol, plastid	82.4	57.14
HORVU2Hr1G063720.1	Barley	plastid	66.95	56.73
TraesCS1B01G464300.1	Wheat	cytosol	83.69	55.87
TraesCS1A01G429400.1	Wheat	cytosol, peroxisome, plasma membrane	82.83	55.78
TraesCS1D01G439000.1	Wheat	cytosol	83.26	54.96
HORVU5Hr1G029200.4	Barley	cytosol	78.54	52.14
HORVU1Hr1G093720.5	Barley	plastid	85.41	51.03
HORVU2Hr1G067170.1	Barley	golgi, mitochondrion, plasma membrane, plastid	33.48	49.37
EES18791	Sorghum	cytosol, endoplasmic reticulum, peroxisome	70.82	47.14
Os05t0589000-02	Rice	plasma membrane	70.82	47.01
Zm00001d039182_P001	Maize	extracellular, plasma membrane	67.38	45.24
HORVU2Hr1G063710.1	Barley	extracellular, golgi, mitochondrion, plastid	34.33	41.88
HORVU3Hr1G077290.1	Barley	extracellular, golgi, mitochondrion, plastid	32.62	40.43
HORVU3Hr1G077280.2	Barley	mitochondrion	32.62	37.25
HORVU3Hr1G052820.4	Barley	mitochondrion, peroxisome	56.65	34.83
AT3G02420.1	Thale cress	cytosol, endoplasmic reticulum, peroxisome	46.78	31.32
KRG93820	Soybean	cytosol, nucleus, plastid	42.49	31.23
Solyc03g045090.2.1	Tomato	nucleus, unclear	46.35	31.21
PGSC0003DMT400048302	Potato	cytosol	46.35	31.03
VIT_14s0083g00300.t01	Wine grape	cytosol	45.06	30.88
PGSC0003DMT400026189	Potato	cytosol, nucleus, peroxisome	45.06	30.26
Bra021462.1-P	Field mustard	cytosol	43.35	29.45
Solyc02g089780.2.1	Tomato	cytosol	12.88	24.79
KRH18270	Soybean	endoplasmic reticulum	42.06	24.75

Protein Annotations

EnsemblPlants:HORVU3Hr1G044700.1	EnsemblPlantsGene:HORVU3Hr1G044700	PANTHER:PTHR30603	PANTHER:PTHR30603:SF41	SEG:seg	UniParc:UPI000B473FE2
UniProt:A0A287KXA8	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:-:289373153..289376633

Molecular Weight (calculated)

25433.5 Da

IEP (calculated)

8.236

GRAVY (calculated)

-0.001

Length

233 amino acids

Sequence
(BLAST)

001: LSGDDDLLAH HGGSKVAAVE QEAKRVAAYD YEADPRWADY WSNVLVPPHL AACPDVLAHF RCKFYHRFID RDLVVELMST TGSTQPSRPD IRSSPSASSE
101: NVRAHNSGSC SRSAAPPPAA PQAGAANPLR FDARTIHFSV NAWELVVAGL GMLPILRKHL ADRACKLSLL GTVLSSGYSL YSTYGKPREL NMPVIQSWLQ
201: SVLGAKDFIH LMFSLLLVTS QLHLKIAALP VFC

Best Arabidopsis Sequence Match ( AT3G02420.1 )
(BLAST)

001: MAEGGEDSQR LKKIAAAAFD YENDARWADY WSNILIPPHM ASRPEVVDHF KRKFYQRYID PDLVVEPMST SSSSSQSARP TATSASSTAS SNANEQVRSR
101: NSGSVPRTSG PSATTGATPS SMRWDEQTIQ FSVNAWVFVI AVLAVLPLIP KNLSNRAYRL SFMGTACSSL YSLYSLYGRP RAWNMQGLQV YFQSIVAAKD
201: FIYFIYCLTF VTSHLCLKFA LIPILCRALE QVAKFLRRNF GRSTIYRKYL EDPCVWVESN TTTLNILSSQ AEIAIGFLLI ISLLSWQRNI IQTFMYWQLL
301: KLMYQAPVTA GYHQSTWSRI GRTVTPIIQR YAPFLNTPVS AVQRWWFR

Arabidopsis Description

AT3g02420/F16B3_5 [Source:UniProtKB/TrEMBL;Acc:Q9M898]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.