Factsheet for HORVU1Hr1G095120.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
extracellular 3
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	plastid
MultiLoc:	extracellular
TargetP:	secretory
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G084220.5

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G02420.1	HORVU1Hr1G084220.5	AT5G49540.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G067170.1	Barley	golgi, mitochondrion, plasma membrane, plastid	69.7	14.56
HORVU3Hr1G044700.1	Barley	cytosol	90.91	12.88
HORVU2Hr1G063710.1	Barley	extracellular, golgi, mitochondrion, plastid	72.73	12.57
HORVU3Hr1G077290.1	Barley	extracellular, golgi, mitochondrion, plastid	69.7	12.23
HORVU6Hr1G054760.4	Barley	cytosol	90.91	11.36
HORVU3Hr1G077280.2	Barley	mitochondrion	69.7	11.27
HORVU2Hr1G063720.1	Barley	plastid	93.94	11.27
HORVU4Hr1G007060.2	Barley	cytosol, plastid	96.97	9.52
TraesCS1A01G429400.1	Wheat	cytosol, peroxisome, plasma membrane	96.97	9.25
TraesCS1B01G464300.1	Wheat	cytosol	96.97	9.17
TraesCS1D01G439000.1	Wheat	cytosol	96.97	9.07
Os05t0589000-02	Rice	plasma membrane	93.94	8.83
Zm00001d039182_P001	Maize	extracellular, plasma membrane	90.91	8.65
HORVU5Hr1G029200.4	Barley	cytosol	90.91	8.55
EES18791	Sorghum	cytosol, endoplasmic reticulum, peroxisome	87.88	8.29
HORVU1Hr1G093720.5	Barley	plastid	96.97	8.21
HORVU3Hr1G052820.4	Barley	mitochondrion, peroxisome	63.64	5.54
KRG93820	Soybean	cytosol, nucleus, plastid	51.52	5.36
VIT_14s0083g00300.t01	Wine grape	cytosol	48.48	4.71
Bra021462.1-P	Field mustard	cytosol	48.48	4.66
Solyc03g045090.2.1	Tomato	nucleus, unclear	48.48	4.62
AT3G02420.1	Thale cress	cytosol, endoplasmic reticulum, peroxisome	48.48	4.6
PGSC0003DMT400048302	Potato	cytosol	48.48	4.6
PGSC0003DMT400026189	Potato	cytosol, nucleus, peroxisome	45.45	4.32
KRH18270	Soybean	endoplasmic reticulum	51.52	4.29
Solyc02g089780.2.1	Tomato	cytosol	0.0	0.0
HORVU1Hr1G093680.1	Barley	extracellular, golgi	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU1Hr1G095120.1	EnsemblPlantsGene:HORVU1Hr1G095120	PANTHER:PTHR30603	PANTHER:PTHR30603:SF41	UniParc:UPI000B482825	UniProt:A0A287GU49
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:557544024..557544124

Molecular Weight (calculated)

3427.5 Da

IEP (calculated)

9.675

GRAVY (calculated)

1.094

Length

33 amino acids

Sequence
(BLAST)

1: QVLVVAGLGM LPILPKHLAD RACKLSLLGT VLS

Best Arabidopsis Sequence Match ( AT3G02420.2 )
(BLAST)

001: MSTSSSSSQS ARPTATSASS TASSNANEQV RSRNSGSVPR TSGPSATTGA TPSSMRWDEQ TIQFSVNAWV FVIAVLAVLP LIPKNLSNRA YRLSFMGTAC
101: SSLYSLYSLY GRPRAWNMQG LQVYFQSIVA AKDFIYFIYC LTFVTSHLCL KFALIPILCR ALEQVAKFLR RNFGRSTIYR KYLEDPCVWV ESNTTTLNIL
201: SSQAEIAIGF LLIISLLSWQ RNIIQTFMYW QLLKLMYQAP VTAGYHQSTW SRIGRTVTPI IQRYAPFLNT PVSAVQRWWF R

Arabidopsis Description

AT3g02420/F16B3_5 [Source:UniProtKB/TrEMBL;Acc:Q9M898]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.