Factsheet for HORVU3Hr1G077280.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	golgi, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G084220.5

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G02420.1	HORVU1Hr1G084220.5	AT5G49540.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G093680.1	Barley	extracellular, golgi	36.27	93.67
HORVU2Hr1G067170.1	Barley	golgi, mitochondrion, plasma membrane, plastid	66.67	86.08
HORVU3Hr1G077290.1	Barley	extracellular, golgi, mitochondrion, plastid	78.92	85.64
HORVU2Hr1G063710.1	Barley	extracellular, golgi, mitochondrion, plastid	76.47	81.68
HORVU1Hr1G095120.1	Barley	extracellular	11.27	69.7
HORVU6Hr1G054760.4	Barley	cytosol	73.53	56.82
HORVU2Hr1G063720.1	Barley	plastid	76.47	56.73
TraesCS1A01G429400.1	Wheat	cytosol, peroxisome, plasma membrane	77.94	45.95
HORVU4Hr1G007060.2	Barley	cytosol, plastid	75.0	45.54
TraesCS1B01G464300.1	Wheat	cytosol	77.45	45.27
TraesCS1D01G439000.1	Wheat	cytosol	77.94	45.04
HORVU5Hr1G029200.4	Barley	cytosol	73.04	42.45
Zm00001d039182_P001	Maize	extracellular, plasma membrane	70.59	41.5
Os05t0589000-02	Rice	plasma membrane	70.59	41.03
EES18791	Sorghum	cytosol, endoplasmic reticulum, peroxisome	70.1	40.86
HORVU1Hr1G093720.5	Barley	plastid	77.94	40.77
HORVU3Hr1G044700.1	Barley	cytosol	37.25	32.62
HORVU3Hr1G052820.4	Barley	mitochondrion, peroxisome	57.84	31.13
VIT_14s0083g00300.t01	Wine grape	cytosol	50.49	30.29
PGSC0003DMT400048302	Potato	cytosol	50.98	29.89
Bra021462.1-P	Field mustard	cytosol	49.51	29.45
Solyc03g045090.2.1	Tomato	nucleus, unclear	49.51	29.19
AT3G02420.1	Thale cress	cytosol, endoplasmic reticulum, peroxisome	49.51	29.02
PGSC0003DMT400026189	Potato	cytosol, nucleus, peroxisome	47.55	27.95
KRG93820	Soybean	cytosol, nucleus, plastid	42.65	27.44
KRH18270	Soybean	endoplasmic reticulum	48.04	24.75
Solyc02g089780.2.1	Tomato	cytosol	7.35	12.4

Protein Annotations

EnsemblPlants:HORVU3Hr1G077280.2	EnsemblPlantsGene:HORVU3Hr1G077280	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:TMEM33/Pom33
PANTHER:PTHR30603	PANTHER:PTHR30603:SF41	PFAM:PF03661	SEG:seg	UniParc:UPI000B472023	UniProt:A0A287LSK2
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:572394611..572397241

Molecular Weight (calculated)

23585.0 Da

IEP (calculated)

9.645

GRAVY (calculated)

0.120

Length

204 amino acids

Sequence
(BLAST)

001: MLPILPKHLA DRACKLSLLG TALSSGYSLY STYGKPRELN MRAIQSWLQS VLGAKDFIHL MFSLLLVTSQ LHLKIATLSV FCWALDHVAR FLRRNFSRSS
101: FYRGYLEEPC LWVETNNTTL SLLSSNAELA LGFLLIISLF SWRRNFIHTF MYWNVLKMMY HALVTIQLPP EHVGEDRADR EPVHRPLPWH IVAHLSKCKN
201: LEAQ

Best Arabidopsis Sequence Match ( AT3G02420.1 )
(BLAST)

001: MAEGGEDSQR LKKIAAAAFD YENDARWADY WSNILIPPHM ASRPEVVDHF KRKFYQRYID PDLVVEPMST SSSSSQSARP TATSASSTAS SNANEQVRSR
101: NSGSVPRTSG PSATTGATPS SMRWDEQTIQ FSVNAWVFVI AVLAVLPLIP KNLSNRAYRL SFMGTACSSL YSLYSLYGRP RAWNMQGLQV YFQSIVAAKD
201: FIYFIYCLTF VTSHLCLKFA LIPILCRALE QVAKFLRRNF GRSTIYRKYL EDPCVWVESN TTTLNILSSQ AEIAIGFLLI ISLLSWQRNI IQTFMYWQLL
301: KLMYQAPVTA GYHQSTWSRI GRTVTPIIQR YAPFLNTPVS AVQRWWFR

Arabidopsis Description

AT3g02420/F16B3_5 [Source:UniProtKB/TrEMBL;Acc:Q9M898]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.