Factsheet for HORVU3Hr1G077290.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, plastid, extracellular

Predictor Summary:

mitochondrion 2
golgi 1
plastid 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G084220.5

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G02420.1	HORVU1Hr1G084220.5	AT5G49540.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G093680.1	Barley	extracellular, golgi	39.36	93.67
HORVU2Hr1G067170.1	Barley	golgi, mitochondrion, plasma membrane, plastid	71.81	85.44
HORVU3Hr1G077280.2	Barley	mitochondrion	85.64	78.92
HORVU2Hr1G063710.1	Barley	extracellular, golgi, mitochondrion, plastid	79.26	78.01
HORVU1Hr1G095120.1	Barley	extracellular	12.23	69.7
HORVU2Hr1G063720.1	Barley	plastid	79.26	54.18
HORVU6Hr1G054760.4	Barley	cytosol	76.06	54.17
HORVU4Hr1G007060.2	Barley	cytosol, plastid	77.66	43.45
TraesCS1A01G429400.1	Wheat	cytosol, peroxisome, plasma membrane	79.79	43.35
TraesCS1B01G464300.1	Wheat	cytosol	79.26	42.69
TraesCS1D01G439000.1	Wheat	cytosol	79.79	42.49
HORVU5Hr1G029200.4	Barley	cytosol	75.53	40.46
Zm00001d039182_P001	Maize	extracellular, plasma membrane	72.34	39.19
Os05t0589000-02	Rice	plasma membrane	72.87	39.03
EES18791	Sorghum	cytosol, endoplasmic reticulum, peroxisome	71.81	38.57
HORVU1Hr1G093720.5	Barley	plastid	79.79	38.46
HORVU3Hr1G044700.1	Barley	cytosol	40.43	32.62
HORVU3Hr1G052820.4	Barley	mitochondrion, peroxisome	60.11	29.82
VIT_14s0083g00300.t01	Wine grape	cytosol	52.13	28.82
PGSC0003DMT400048302	Potato	cytosol	52.66	28.45
Bra021462.1-P	Field mustard	cytosol	51.6	28.28
KRG93820	Soybean	cytosol, nucleus, plastid	46.81	27.76
Solyc03g045090.2.1	Tomato	nucleus, unclear	51.06	27.75
AT3G02420.1	Thale cress	cytosol, endoplasmic reticulum, peroxisome	50.53	27.3
PGSC0003DMT400026189	Potato	cytosol, nucleus, peroxisome	48.94	26.51
KRH18270	Soybean	endoplasmic reticulum	50.53	23.99
Solyc02g089780.2.1	Tomato	cytosol	5.85	9.09

Protein Annotations

EnsemblPlants:HORVU3Hr1G077290.1	EnsemblPlantsGene:HORVU3Hr1G077290	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:TMEM33/Pom33
PANTHER:PTHR30603	PANTHER:PTHR30603:SF41	PFAM:PF03661	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B466AD1
UniProt:A0A287LSL4	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:-:572480924..572483060

Molecular Weight (calculated)

21621.8 Da

IEP (calculated)

9.942

GRAVY (calculated)

0.359

Length

188 amino acids

Sequence
(BLAST)

001: MLPILPKHLA DRACKLSLLG TALSSGYSLY STYGKPRELN MRAIQSWLQS VLGAKDFIHL MFSLLLVTSQ LHLKIATLSV FCWALDHVAR FLRRNFSRSS
101: FYRGYLEEPC LWVETNNTTL SLLSSNAELA LGFLLIISLF SWRRNFIHTF MYWNLGNNMR HNLMCFAACF KPLLSVHLTI INLQLTTL

Best Arabidopsis Sequence Match ( AT3G02420.1 )
(BLAST)

001: MAEGGEDSQR LKKIAAAAFD YENDARWADY WSNILIPPHM ASRPEVVDHF KRKFYQRYID PDLVVEPMST SSSSSQSARP TATSASSTAS SNANEQVRSR
101: NSGSVPRTSG PSATTGATPS SMRWDEQTIQ FSVNAWVFVI AVLAVLPLIP KNLSNRAYRL SFMGTACSSL YSLYSLYGRP RAWNMQGLQV YFQSIVAAKD
201: FIYFIYCLTF VTSHLCLKFA LIPILCRALE QVAKFLRRNF GRSTIYRKYL EDPCVWVESN TTTLNILSSQ AEIAIGFLLI ISLLSWQRNI IQTFMYWQLL
301: KLMYQAPVTA GYHQSTWSRI GRTVTPIIQR YAPFLNTPVS AVQRWWFR

Arabidopsis Description

AT3g02420/F16B3_5 [Source:UniProtKB/TrEMBL;Acc:Q9M898]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.