Factsheet for HORVU2Hr1G063710.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, plastid, extracellular

Predictor Summary:

mitochondrion 2
golgi 1
plastid 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, mitochondrion, plastid
Any Predictor:	golgi, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G084220.5

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G02420.1	HORVU1Hr1G084220.5	AT5G49540.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G093680.1	Barley	extracellular, golgi	39.79	96.2
HORVU2Hr1G067170.1	Barley	golgi, mitochondrion, plasma membrane, plastid	73.3	88.61
HORVU3Hr1G077290.1	Barley	extracellular, golgi, mitochondrion, plastid	78.01	79.26
HORVU3Hr1G077280.2	Barley	mitochondrion	81.68	76.47
HORVU1Hr1G095120.1	Barley	extracellular	12.57	72.73
HORVU2Hr1G063720.1	Barley	plastid	100.0	69.45
HORVU6Hr1G054760.4	Barley	cytosol	84.82	61.36
HORVU4Hr1G007060.2	Barley	cytosol, plastid	93.19	52.98
TraesCS1A01G429400.1	Wheat	cytosol, peroxisome, plasma membrane	95.29	52.6
TraesCS1B01G464300.1	Wheat	cytosol	94.76	51.86
TraesCS1D01G439000.1	Wheat	cytosol	95.29	51.56
HORVU5Hr1G029200.4	Barley	cytosol	90.58	49.29
Zm00001d039182_P001	Maize	extracellular, plasma membrane	85.34	46.97
HORVU1Hr1G093720.5	Barley	plastid	95.81	46.92
EES18791	Sorghum	cytosol, endoplasmic reticulum, peroxisome	84.82	46.29
Os05t0589000-02	Rice	plasma membrane	84.82	46.15
HORVU3Hr1G052820.4	Barley	mitochondrion, peroxisome	68.59	34.56
HORVU3Hr1G044700.1	Barley	cytosol	41.88	34.33
VIT_14s0083g00300.t01	Wine grape	cytosol	60.21	33.82
Bra021462.1-P	Field mustard	cytosol	60.73	33.82
PGSC0003DMT400048302	Potato	cytosol	59.16	32.47
AT3G02420.1	Thale cress	cytosol, endoplasmic reticulum, peroxisome	59.16	32.47
Solyc03g045090.2.1	Tomato	nucleus, unclear	57.59	31.79
PGSC0003DMT400026189	Potato	cytosol, nucleus, peroxisome	56.54	31.12
KRG93820	Soybean	cytosol, nucleus, plastid	46.6	28.08
KRH18270	Soybean	endoplasmic reticulum	58.12	28.03
Solyc02g089780.2.1	Tomato	cytosol	13.61	21.49

Protein Annotations

EnsemblPlants:HORVU2Hr1G063710.1	EnsemblPlantsGene:HORVU2Hr1G063710	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:TMEM33/Pom33
PANTHER:PTHR30603	PANTHER:PTHR30603:SF41	PFAM:PF03661	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B4646D1
UniProt:A0A287I7D6	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:431173846..431176353

Molecular Weight (calculated)

22139.4 Da

IEP (calculated)

10.320

GRAVY (calculated)

0.249

Length

191 amino acids

Sequence
(BLAST)

001: MLPILPKHLA DRACKLSLLG TVLSSGYSLY STYGKPRELN MPAIQSWLQS VLGAKDFIHL MFSLLLVTSQ LHLKIAALPV FCWALYHVAR FLRRNFSRSS
101: FYRGYLEEPC LWVETNNTTL SLLSSNAELA LGFLLIISLF LWRRNFMQTF MYWNVLKMMY RAPVTSSYHQ SAWAKIGRTV NPYIDRFRGI L

Best Arabidopsis Sequence Match ( AT3G02420.1 )
(BLAST)

001: MAEGGEDSQR LKKIAAAAFD YENDARWADY WSNILIPPHM ASRPEVVDHF KRKFYQRYID PDLVVEPMST SSSSSQSARP TATSASSTAS SNANEQVRSR
101: NSGSVPRTSG PSATTGATPS SMRWDEQTIQ FSVNAWVFVI AVLAVLPLIP KNLSNRAYRL SFMGTACSSL YSLYSLYGRP RAWNMQGLQV YFQSIVAAKD
201: FIYFIYCLTF VTSHLCLKFA LIPILCRALE QVAKFLRRNF GRSTIYRKYL EDPCVWVESN TTTLNILSSQ AEIAIGFLLI ISLLSWQRNI IQTFMYWQLL
301: KLMYQAPVTA GYHQSTWSRI GRTVTPIIQR YAPFLNTPVS AVQRWWFR

Arabidopsis Description

AT3g02420/F16B3_5 [Source:UniProtKB/TrEMBL;Acc:Q9M898]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.