Factsheet for Os01t0641700-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
golgi 1
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	golgi, nucleus, peroxisome, plastid
BaCelLo:	plastid
MultiLoc:	golgi
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G222600.1	Wheat	plastid	83.27	74.17
TraesCS3A01G230700.1	Wheat	plastid	83.27	74.17
TraesCS3B01G260000.1	Wheat	plasma membrane	83.64	70.98
EES03339	Sorghum	plastid	85.13	68.36
Zm00001d044089_P002	Maize	plastid	85.5	64.43
GSMUA_Achr7P17170_001	Banana	plastid	53.53	49.66
GSMUA_Achr8P29730_001	Banana	cytosol	58.74	45.93
Os05t0589000-02	Rice	plasma membrane	56.13	43.02
Os01t0604700-01	Rice	cytosol, peroxisome, plastid	56.51	42.94
GSMUA_Achr1P25230_001	Banana	cytosol, endoplasmic reticulum, peroxisome	56.13	42.42
Bra021462.1-P	Field mustard	cytosol	53.16	41.69
VIT_14s0083g00300.t01	Wine grape	cytosol	52.04	41.18
PGSC0003DMT400048302	Potato	cytosol	53.16	41.09
Solyc03g045090.2.1	Tomato	nucleus, unclear	52.79	41.04
PGSC0003DMT400026189	Potato	cytosol, nucleus, peroxisome	51.3	39.77
AT3G02420.1	Thale cress	cytosol, endoplasmic reticulum, peroxisome	50.93	39.37
KRH18270	Soybean	endoplasmic reticulum	50.56	34.34
KRG93820	Soybean	cytosol, nucleus, plastid	39.78	33.75
Solyc02g089780.2.1	Tomato	cytosol	14.13	31.41

Protein Annotations

MapMan:35.2	EntrezGene:4326558	EMBL:AK103294	ProteinID:BAD68742.1	ProteinID:BAD68855.1	ProteinID:BAF05600.1
ProteinID:BAS73369.1	ProteinID:EEE55067.1	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:Os01g0641700
EnsemblPlants:Os01t0641700-01	PFAM:PF03661	PANTHER:PTHR30603	PANTHER:PTHR30603:SF20	UniProt:Q5VNW6	InterPro:TMEM33/Pom33
TMHMM:TMhelix	UniParc:UPI0000457F6E	RefSeq:XP_015614372.1	RefSeq:XP_015614445.1	RefSeq:XP_015614512.1	SEG:seg

Description

Uncharacterised protein family UPF0121 domain containing protein. (Os01t0641700-01)

Coordinates

chr1:-:25777616..25781934

Molecular Weight (calculated)

30830.6 Da

IEP (calculated)

10.366

GRAVY (calculated)

0.016

Length

269 amino acids

Sequence
(BLAST)

001: MSSTSSSQPP ASSDRESTPA SDNATSPDSD GTNSAGPARS RIALQLDQRS LHFSVTAWVL IVALIGILPL TPRQLQYKGY RLSLLGTTCT TGYALFAFYR
101: LPRAGNMHAA QIFHHVASSK DFIPFMYCLM FVMSKLHLKL VLVPVICWAL EHVARFLRRH FTNSSLYRTY LEKPCTWVET NTTAVKFLSS NAEILLGFLL
201: ILSLFSRQRN PMQTFMYWQL LKLMYHSPFT AGYHRAIWLK IGRTVNPYIH RYTPFLHDPI NAGMRWWFR

Best Arabidopsis Sequence Match ( AT3G02420.2 )
(BLAST)

001: MSTSSSSSQS ARPTATSASS TASSNANEQV RSRNSGSVPR TSGPSATTGA TPSSMRWDEQ TIQFSVNAWV FVIAVLAVLP LIPKNLSNRA YRLSFMGTAC
101: SSLYSLYSLY GRPRAWNMQG LQVYFQSIVA AKDFIYFIYC LTFVTSHLCL KFALIPILCR ALEQVAKFLR RNFGRSTIYR KYLEDPCVWV ESNTTTLNIL
201: SSQAEIAIGF LLIISLLSWQ RNIIQTFMYW QLLKLMYQAP VTAGYHQSTW SRIGRTVTPI IQRYAPFLNT PVSAVQRWWF R

Arabidopsis Description

AT3g02420/F16B3_5 [Source:UniProtKB/TrEMBL;Acc:Q9M898]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.