Factsheet for Os01t0604700-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G215100.1	Wheat	cytosol, peroxisome, plastid	86.72	87.71
EES03240	Sorghum	cytosol, peroxisome, plastid	87.57	87.57
TraesCS3B01G246200.2	Wheat	cytosol, peroxisome, plastid	85.31	86.29
HORVU3Hr1G052820.4	Barley	mitochondrion, peroxisome	86.44	80.74
Zm00001d044412_P001	Maize	cytosol, nucleus, peroxisome	86.16	74.94
Os05t0589000-02	Rice	plasma membrane	73.45	74.07
Solyc02g089780.2.1	Tomato	cytosol	23.45	68.59
PGSC0003DMT400048302	Potato	cytosol	61.3	62.36
VIT_14s0083g00300.t01	Wine grape	cytosol	59.89	62.35
Solyc03g045090.2.1	Tomato	nucleus, unclear	60.45	61.85
AT3G02420.1	Thale cress	cytosol, endoplasmic reticulum, peroxisome	60.73	61.78
PGSC0003DMT400026189	Potato	cytosol, nucleus, peroxisome	59.6	60.81
Bra021462.1-P	Field mustard	cytosol	58.47	60.35
Os01t0641700-01	Rice	plastid	42.94	56.51
KRG93820	Soybean	cytosol, nucleus, plastid	48.31	53.94
KRH18270	Soybean	endoplasmic reticulum	58.47	52.27
GSMUA_Achr7P17180_001	Banana	cytosol, mitochondrion, nucleus	14.12	51.55

Protein Annotations

EnsemblPlants:Os01t0604700-01	EnsemblPlantsGene:Os01g0604700	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:TMEM33/Pom33
PANTHER:PTHR30603	PANTHER:PTHR30603:SF41	PFAM:PF03661	ProteinID:BAF05427.1	ProteinID:BAS73057.1	SEG:seg
UniParc:UPI0000DD8BE3	UniProt:Q0JLF1	MapMan:35.2	:	:	:

Description

Similar to cDNA clone:001-043-A08, full insert sequence. (Os01t0604700-01);Similar to predicted protein. (Os01t0604700-02)

Coordinates

chr1:-:23814822..23819251

Molecular Weight (calculated)

39917.9 Da

IEP (calculated)

10.090

GRAVY (calculated)

-0.105

Length

354 amino acids

Sequence
(BLAST)

001: MGDGEGSTGG GGGGGDPQRL KRIGAAAYDY ENDSRWAGYW SNVLVPPHLA SRPDVVDHFK RKFYQRYIDP DLIVEPMSST SSSQSTKPAA RSSATPSNEN
101: VRARDSGSSA RSTAASQPSQ TERTANSLWL DGRTIHFSIN AWVLVVASLG ILPILPKHIA SKAYRLSLLG TICSSAYSLY VTYGKPRAWN MAAIQPWLQS
201: IIVAKDFVHL MFSLMMFTSN VHYKIALLPV LCWALDHVAR FLRRNFARSS LYRQYLEEPC LWVETNNTTL SLLCSNAEIT LGFLMIVSLF SWRRNIIQTF
301: MYFHLLKLMY HAPVTSGYHQ SAWARIGRAV NPYIHRYAPF LNTPISAVQR WWLR

Best Arabidopsis Sequence Match ( AT3G02420.1 )
(BLAST)

001: MAEGGEDSQR LKKIAAAAFD YENDARWADY WSNILIPPHM ASRPEVVDHF KRKFYQRYID PDLVVEPMST SSSSSQSARP TATSASSTAS SNANEQVRSR
101: NSGSVPRTSG PSATTGATPS SMRWDEQTIQ FSVNAWVFVI AVLAVLPLIP KNLSNRAYRL SFMGTACSSL YSLYSLYGRP RAWNMQGLQV YFQSIVAAKD
201: FIYFIYCLTF VTSHLCLKFA LIPILCRALE QVAKFLRRNF GRSTIYRKYL EDPCVWVESN TTTLNILSSQ AEIAIGFLLI ISLLSWQRNI IQTFMYWQLL
301: KLMYQAPVTA GYHQSTWSRI GRTVTPIIQR YAPFLNTPVS AVQRWWFR

Arabidopsis Description

AT3g02420/F16B3_5 [Source:UniProtKB/TrEMBL;Acc:Q9M898]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.