Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P26350_001 | Banana | cytosol | 78.45 | 75.21 |
| Solyc01g058280.2.1 | Tomato | cytosol | 66.38 | 74.76 |
| EES19917 | Sorghum | cytosol | 69.83 | 72.97 |
| Zm00001d009496_P001 | Maize | cytosol | 68.97 | 72.07 |
| EES01277 | Sorghum | cytosol | 69.83 | 71.68 |
| TraesCS1B01G403700.1 | Wheat | plasma membrane | 66.38 | 69.37 |
| TraesCS1A01G381200.1 | Wheat | plasma membrane | 66.38 | 69.37 |
| TraesCS1D01G389000.1 | Wheat | cytosol, plasma membrane, vacuole | 58.62 | 65.38 |
| KRH11903 | Soybean | plasma membrane | 66.38 | 64.17 |
| KRH36943 | Soybean | plasma membrane | 66.38 | 64.17 |
| CDY69277 | Canola | plasma membrane | 60.34 | 61.4 |
| PGSC0003DMT400074727 | Potato | cytosol | 61.21 | 61.21 |
| CDX86229 | Canola | plasma membrane | 60.34 | 60.87 |
| KRH02404 | Soybean | plasma membrane | 62.93 | 60.83 |
| AT5G49540.1 | Thale cress | plasma membrane | 58.62 | 59.65 |
| HORVU1Hr1G084220.5 | Barley | cytosol | 54.31 | 56.25 |
| Bra010030.1-P | Field mustard | plasma membrane | 47.41 | 47.41 |
| KRG89626 | Soybean | plasma membrane | 37.93 | 45.36 |
| KRH00023 | Soybean | cytosol, plasma membrane, vacuole | 36.21 | 44.68 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P03880_001 | EnsemblPlants:GSMUA_Achr8T03880_001 | EnsemblPlantsGene:GSMUA_Achr8G03880_001 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0072546 | InterPro:Emc6 |
| InterPro:Rab5IP_fam | PANTHER:PTHR20994 | PANTHER:PTHR20994:SF3 | PFAM:PF07019 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0002966798 | UniProt:M0TME1 | MapMan:35.2 | : | : | : |
Description
Putative Transmembrane protein 93 homolog [Source:GMGC_GENE;Acc:GSMUA_Achr8G03880_001]
Coordinates
chr8:-:2677335..2681255
Molecular Weight (calculated)
12924.5 Da
IEP (calculated)
4.306
GRAVY (calculated)
0.643
Length
116 amino acids
Sequence
(BLAST)
(BLAST)
001: MVWEGDRGAS GGAEDDLPIF NAENLQSNVK SIYYSRTFLS IIGGVIAGIW GFTGFTGFIF YFLVMAAASF GLATQAKFSV CTYFDSWNRI FLDGIFGGLM
101: SFVLFWTFAY DIVHIF
101: SFVLFWTFAY DIVHIF
001: MGSSEKRSKD IMSDIPTFSA ENLQNNLKVI QNSRTFLSII AGVLAGIIGF NGLIGFVFYF VVMLITSVGL MAKAGFSADL YFDSWNRVLF DGFLGGLMSF
101: VLFWTFAYDL VHIF
101: VLFWTFAYDL VHIF
Arabidopsis Description
AT5g49540/K6M13_9 [Source:UniProtKB/TrEMBL;Acc:Q9AST5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.