CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19917	Sorghum	cytosol	76.99	78.38
GSMUA_Achr8P03880_001	Banana	cytosol, plasma membrane, vacuole	71.68	69.83
Solyc01g058280.2.1	Tomato	cytosol	59.29	65.05
GSMUA_Achr3P26350_001	Banana	cytosol	68.14	63.64
KRH02404	Soybean	plasma membrane	64.6	60.83
KRH36943	Soybean	plasma membrane	64.6	60.83
KRH11903	Soybean	plasma membrane	63.72	60.0
CDY69277	Canola	plasma membrane	60.18	59.65
CDX86229	Canola	plasma membrane	60.18	59.13
AT5G49540.1	Thale cress	plasma membrane	59.29	58.77
PGSC0003DMT400074727	Potato	cytosol	52.21	50.86
Bra010030.1-P	Field mustard	plasma membrane	46.9	45.69
KRH00023	Soybean	cytosol, plasma membrane, vacuole	34.51	41.49
KRG89626	Soybean	plasma membrane	35.4	41.24

Protein Annotations

MapMan:35.2	EntrezGene:8063068	UniProt:C5XGS7	EnsemblPlants:EES01277	ProteinID:EES01277	ProteinID:EES01277.1
InterPro:Emc6	GO:GO:0000045	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	GO:GO:0034975	GO:GO:0072546	PFAM:PF07019	PANTHER:PTHR20994
PANTHER:PTHR20994:SF3	InterPro:Rab5IP_fam	EnsemblPlantsGene:SORBI_3003G259700	TMHMM:TMhelix	UniParc:UPI0001A84664	RefSeq:XP_002456157.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:59781341..59784167

Molecular Weight (calculated)

12336.4 Da

IEP (calculated)

7.775

GRAVY (calculated)

1.052

Length

113 amino acids

Sequence
(BLAST)

001: MAAAAAGGGL SGDVPIFHAE NLVSNVKSIN YSRTFLSIIS GVVAGIWGFT GLMGFVFYFL VMMVASLMLL VKAKVSVHTY FDSWNRIIIE GVLGGLMSFV
101: LFWTFAYDIV HIF

Best Arabidopsis Sequence Match ( AT5G49540.1 )
(BLAST)

001: MGSSEKRSKD IMSDIPTFSA ENLQNNLKVI QNSRTFLSII AGVLAGIIGF NGLIGFVFYF VVMLITSVGL MAKAGFSADL YFDSWNRVLF DGFLGGLMSF
101: VLFWTFAYDL VHIF

Arabidopsis Description

AT5g49540/K6M13_9 [Source:UniProtKB/TrEMBL;Acc:Q9AST5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.