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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 2
  • plastid 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:mitochondrion, nucleus, plasma membrane, plastid
PProwler:secretory
WoLF PSORT:cytosol
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY24806 Canola cytosol 98.14 96.35
CDY41666 Canola cytosol 95.54 93.12
Bra013717.1-P Field mustard nucleus 92.19 89.86
AT4G23630.2 Thale cress nucleus 91.45 89.45
Bra019285.1-P Field mustard cytosol 88.85 89.18
Bra000739.1-P Field mustard cytosol 83.27 83.9
KRH59988 Soybean mitochondrion 66.17 70.08
KRH41254 Soybean cytosol, nucleus, plasma membrane 65.8 69.69
Bra027678.1-P Field mustard cytosol, endoplasmic reticulum, nucleus 63.2 67.73
VIT_02s0025g00640.t01 Wine grape cytosol, nucleus, plasma membrane 63.2 67.46
Bra027757.1-P Field mustard cytosol, endoplasmic reticulum, peroxisome 62.45 67.2
VIT_15s0046g01760.t01 Wine grape cytosol, peroxisome, plasma membrane 63.57 67.06
Bra004562.1-P Field mustard cytosol, peroxisome, plasma membrane 60.97 65.34
GSMUA_Achr8P27830_001 Banana cytosol, peroxisome, plasma membrane 59.85 64.14
Os05t0526400-01 Rice plasma membrane 59.48 63.74
Solyc08g081730.2.1 Tomato endoplasmic reticulum, plastid 63.57 63.33
PGSC0003DMT400032086 Potato cytosol, nucleus, plasma membrane 63.57 63.33
TraesCS3D01G279100.1 Wheat cytosol, nucleus, plasma membrane 58.36 63.31
TraesCS3B01G313000.1 Wheat cytosol, nucleus, plasma membrane 59.11 62.85
TraesCS3A01G278800.1 Wheat golgi 57.62 62.5
GSMUA_Achr9P05440_001 Banana nucleus, peroxisome, plasma membrane 57.99 62.15
Os01t0736900-01 Rice plasma membrane 58.36 62.06
HORVU3Hr1G069970.2 Barley cytosol, nucleus, plasma membrane 58.74 61.96
TraesCS1B01G360800.1 Wheat cytosol, nucleus, plasma membrane 57.25 61.85
Bra003455.1-P Field mustard cytosol, peroxisome, plasma membrane 58.36 61.81
Zm00001d012776_P001 Maize extracellular 57.99 61.66
Zm00001d043551_P003 Maize plasma membrane 58.74 61.48
TraesCS1D01G349700.1 Wheat cytosol, nucleus, plasma membrane 56.51 61.29
Os01t0226300-01 Rice plasma membrane 40.52 61.24
EES19841 Sorghum cytosol, nucleus, plasma membrane 57.99 61.18
GSMUA_AchrUn_... Banana cytosol, nucleus, plasma membrane 58.36 60.85
KXG33320 Sorghum cytosol, nucleus, plasma membrane 58.36 60.85
GSMUA_Achr6P31860_001 Banana cytosol, nucleus, plasma membrane 56.88 60.71
Zm00001d038768_P001 Maize extracellular, mitochondrion 56.51 59.84
GSMUA_Achr10P... Banana cytosol, endoplasmic reticulum, plasma membrane 55.39 59.13
GSMUA_Achr4P08400_001 Banana cytosol 53.9 57.31
GSMUA_Achr3P31920_001 Banana cytosol 46.47 57.08
Zm00001d008982_P001 Maize cytosol, nucleus, plasma membrane 55.76 53.76
KXG31516 Sorghum cytosol, nucleus, plasma membrane 56.13 53.17
TraesCS3D01G159100.1 Wheat cytosol, nucleus, plasma membrane 56.13 52.8
TraesCS3B01G178100.1 Wheat cytosol, nucleus, plasma membrane 55.76 52.45
GSMUA_Achr5P06850_001 Banana cytosol, nucleus, plasma membrane 48.7 52.4
Os02t0265900-01 Rice cytosol, peroxisome, plasma membrane 44.24 51.74
Zm00001d020229_P001 Maize plasma membrane 29.0 51.32
Zm00001d016041_P001 Maize extracellular 43.87 51.3
TraesCS1A01G346800.3 Wheat plasma membrane 46.84 50.0
OQU84758 Sorghum cytosol, peroxisome, plasma membrane 42.75 49.57
Zm00001d020729_P001 Maize plasma membrane 17.47 49.47
Zm00001d039316_P001 Maize cytosol, nucleus, plasma membrane 55.76 49.02
HORVU1Hr1G082010.3 Barley cytosol, nucleus, plasma membrane, plastid 47.21 48.66
TraesCS7A01G341800.1 Wheat cytosol, peroxisome, plasma membrane, plastid 46.84 48.46
TraesCS7B01G241100.1 Wheat cytosol, peroxisome, plasma membrane, plastid 46.84 48.46
EER89811 Sorghum peroxisome 46.1 48.44
TraesCS7D01G337800.1 Wheat cytosol, peroxisome, plasma membrane, plastid 46.47 48.08
Zm00001d037453_P001 Maize cytosol, peroxisome, plasma membrane 46.1 47.51
HORVU3Hr1G030760.2 Barley mitochondrion 55.39 47.45
Bra037369.1-P Field mustard cytosol 42.75 47.33
Os06t0503400-01 Rice plasma membrane 46.1 46.79
TraesCS3A01G151200.1 Wheat cytosol, peroxisome, plasma membrane 55.39 46.27
HORVU7Hr1G081290.4 Barley plastid 38.66 45.02
Bra035242.1-P Field mustard cytosol 33.46 45.0
HORVU7Hr1G075700.2 Barley mitochondrion 46.84 42.0
GSMUA_Achr3P15760_001 Banana cytosol 21.56 38.67
Bra029827.1-P Field mustard plasma membrane 32.71 36.82
Bra037594.1-P Field mustard plasma membrane 29.0 34.82
VIT_07s0031g02730.t01 Wine grape golgi, mitochondrion, nucleus, plasma membrane 22.68 33.89
Bra004291.1-P Field mustard plasma membrane 25.65 32.7
Bra003171.1-P Field mustard plasma membrane 24.16 32.02
Bra001748.1-P Field mustard plastid 22.68 31.12
Bra007047.1-P Field mustard golgi, plasma membrane, vacuole 23.05 30.24
Bra040612.1-P Field mustard plasma membrane 20.07 29.51
Bra029878.1-P Field mustard cytosol, peroxisome, plasma membrane 25.65 28.87
Bra022426.1-P Field mustard cytosol, plasma membrane, plastid 25.65 28.28
Bra034153.1-P Field mustard plasma membrane 23.42 28.25
Bra039207.1-P Field mustard plasma membrane 17.84 23.08
Bra033951.1-P Field mustard plasma membrane 24.91 22.19
Protein Annotations
EnsemblPlants:Bra010539.1EnsemblPlants:Bra010539.1-PEnsemblPlantsGene:Bra010539GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0016020GO:GO:0016021InterPro:IPR003388
InterPro:ReticulonPANTHER:PTHR10994PANTHER:PTHR10994:SF70PFAM:PF02453PFscan:PS50845SEG:seg
TMHMM:TMhelixUniParc:UPI0002545E37UniProt:M4D239MapMan:13.7.2.1::
Description
AT4G23630 (E=4e-122) BTI1 | BTI1 (VIRB2-INTERACTING PROTEIN 1)
Coordinates
chrA08:+:15045922..15047111
Molecular Weight (calculated)
30181.9 Da
IEP (calculated)
8.433
GRAVY (calculated)
-0.135
Length
269 amino acids
Sequence
(BLAST)
001: MTEEHKHEET VTASEPAVEI VERESLMDKI SEKIHHGGGD SSSSSSSSDD EKEKKEKPSS PSSMKSKVYR LFGREKPVHK VLGGGKPADI FMWKDKKMSG
101: GATAAWVLFE LMEYHLLTLL CHVMIVVLAV LFLWSNATMF IHKSPPKIPE VHIPEEPVLQ LASGLRIEIN RGFHSLREIA SGRDLKKFIS AVAGLWVLSI
201: LGGWFNFLTL AYIALVLLFT VPLVYDKYED KVDPLGEKAM IEIKKQYAVL DEKVLSKIPL GPLKNKKRD
Best Arabidopsis Sequence Match ( AT4G23630.2 )
(BLAST)
001: MAEEHKHDES VIAPEPAVEV VERESLMDKI SEKIHHGGDS SSSSSSSDDE DEKKKTKKPS SPSSSMKSKV YRLFGREQPV HKVLGGGKPA DIFMWKNKKM
101: SGGVLGGATA AWVVFELMEY HLLTLLCHVM IVVLAVLFLW SNATMFINKS PPKIPEVHIP EEPILQLASG LRIEINRGFS SLREIASGRD LKKFLIAIAG
201: LWVLSILGGC FNFLTLAYIA LVLLFTVPLA YDKYEDKVDP LGEKAMIELK KQYAVLDEKV LSKIPLGPLK NKKKD
Arabidopsis Description
RTNLB1Reticulon-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178V247]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.