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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • plasma membrane 1
  • plastid 1
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:nucleus
MultiLoc:nucleus
Plant-mPloc:plasma membrane, plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY44123 Canola cytosol, nucleus, plasma membrane 98.19 98.19
AT4G23630.2 Thale cress nucleus 93.12 93.45
Bra019285.1-P Field mustard cytosol 90.22 92.91
Bra010539.1-P Field mustard cytosol 89.86 92.19
Bra000739.1-P Field mustard cytosol 82.61 85.39
KRH59988 Soybean mitochondrion 64.49 70.08
Bra027678.1-P Field mustard cytosol, endoplasmic reticulum, nucleus 63.04 69.32
KRH41254 Soybean cytosol, nucleus, plasma membrane 63.77 69.29
VIT_02s0025g00640.t01 Wine grape cytosol, nucleus, plasma membrane 62.68 68.65
VIT_15s0046g01760.t01 Wine grape cytosol, peroxisome, plasma membrane 63.41 68.63
Bra027757.1-P Field mustard cytosol, endoplasmic reticulum, peroxisome 61.96 68.4
Bra004562.1-P Field mustard cytosol, peroxisome, plasma membrane 60.14 66.14
GSMUA_Achr8P27830_001 Banana cytosol, peroxisome, plasma membrane 60.14 66.14
TraesCS3D01G279100.1 Wheat cytosol, nucleus, plasma membrane 59.06 65.73
Os05t0526400-01 Rice plasma membrane 59.42 65.34
HORVU3Hr1G069970.2 Barley cytosol, nucleus, plasma membrane 60.14 65.1
TraesCS3A01G278800.1 Wheat golgi 58.33 64.92
TraesCS3B01G313000.1 Wheat cytosol, nucleus, plasma membrane 59.42 64.82
PGSC0003DMT400032086 Potato cytosol, nucleus, plasma membrane 63.41 64.81
Solyc08g081730.2.1 Tomato endoplasmic reticulum, plastid 63.41 64.81
Zm00001d012776_P001 Maize extracellular 59.06 64.43
Zm00001d043551_P003 Maize plasma membrane 59.78 64.2
GSMUA_Achr9P05440_001 Banana nucleus, peroxisome, plasma membrane 58.33 64.14
Os01t0736900-01 Rice plasma membrane 58.7 64.03
KXG33320 Sorghum cytosol, nucleus, plasma membrane 59.42 63.57
EES19841 Sorghum cytosol, nucleus, plasma membrane 57.97 62.75
TraesCS1D01G349700.1 Wheat cytosol, nucleus, plasma membrane 56.16 62.5
Os01t0226300-01 Rice plasma membrane 40.22 62.36
TraesCS1B01G360800.1 Wheat cytosol, nucleus, plasma membrane 56.16 62.25
Bra003455.1-P Field mustard cytosol, peroxisome, plasma membrane 57.25 62.2
GSMUA_AchrUn_... Banana cytosol, nucleus, plasma membrane 57.97 62.02
GSMUA_Achr6P31860_001 Banana cytosol, nucleus, plasma membrane 56.52 61.9
Zm00001d038768_P001 Maize extracellular, mitochondrion 56.52 61.42
GSMUA_Achr10P... Banana cytosol, endoplasmic reticulum, plasma membrane 55.8 61.11
GSMUA_Achr4P08400_001 Banana cytosol 53.62 58.5
GSMUA_Achr3P31920_001 Banana cytosol 46.38 58.45
GSMUA_Achr5P06850_001 Banana cytosol, nucleus, plasma membrane 50.0 55.2
Zm00001d008982_P001 Maize cytosol, nucleus, plasma membrane 54.71 54.12
KXG31516 Sorghum cytosol, nucleus, plasma membrane 55.07 53.52
Os02t0265900-01 Rice cytosol, peroxisome, plasma membrane 44.57 53.48
TraesCS3D01G159100.1 Wheat cytosol, nucleus, plasma membrane 55.07 53.15
TraesCS3B01G178100.1 Wheat cytosol, nucleus, plasma membrane 54.71 52.8
Zm00001d016041_P001 Maize extracellular 43.84 52.61
OQU84758 Sorghum cytosol, peroxisome, plasma membrane 43.48 51.72
TraesCS1A01G346800.3 Wheat plasma membrane 46.38 50.79
Zm00001d020229_P001 Maize plasma membrane 27.9 50.66
TraesCS7B01G241100.1 Wheat cytosol, peroxisome, plasma membrane, plastid 47.1 50.0
TraesCS7A01G341800.1 Wheat cytosol, peroxisome, plasma membrane, plastid 47.1 50.0
EER89811 Sorghum peroxisome 46.38 50.0
TraesCS7D01G337800.1 Wheat cytosol, peroxisome, plasma membrane, plastid 46.74 49.62
Zm00001d039316_P001 Maize cytosol, nucleus, plasma membrane 54.71 49.35
Zm00001d037453_P001 Maize cytosol, peroxisome, plasma membrane 46.38 49.04
HORVU1Hr1G082010.3 Barley cytosol, nucleus, plasma membrane, plastid 46.38 49.04
Os06t0503400-01 Rice plasma membrane 46.74 48.68
Bra037369.1-P Field mustard cytosol 42.39 48.15
HORVU3Hr1G030760.2 Barley mitochondrion 54.71 48.09
TraesCS3A01G151200.1 Wheat cytosol, peroxisome, plasma membrane 54.71 46.89
Zm00001d020729_P001 Maize plasma membrane 15.94 46.32
Bra035242.1-P Field mustard cytosol 32.97 45.5
HORVU7Hr1G081290.4 Barley plastid 38.04 45.45
HORVU7Hr1G075700.2 Barley mitochondrion 46.74 43.0
GSMUA_Achr3P15760_001 Banana cytosol 22.1 40.67
Bra029827.1-P Field mustard plasma membrane 33.33 38.49
Bra037594.1-P Field mustard plasma membrane 29.71 36.61
VIT_07s0031g02730.t01 Wine grape golgi, mitochondrion, nucleus, plasma membrane 22.83 35.0
Bra001748.1-P Field mustard plastid 24.64 34.69
Bra004291.1-P Field mustard plasma membrane 25.72 33.65
Bra003171.1-P Field mustard plasma membrane 24.28 33.0
Bra040612.1-P Field mustard plasma membrane 21.01 31.69
Bra007047.1-P Field mustard golgi, plasma membrane, vacuole 23.19 31.22
Bra022426.1-P Field mustard cytosol, plasma membrane, plastid 27.17 30.74
Bra029878.1-P Field mustard cytosol, peroxisome, plasma membrane 25.72 29.71
Bra034153.1-P Field mustard plasma membrane 23.55 29.15
Bra039207.1-P Field mustard plasma membrane 18.48 24.52
Bra033951.1-P Field mustard plasma membrane 25.0 22.85
Protein Annotations
EnsemblPlants:Bra013717.1EnsemblPlants:Bra013717.1-PEnsemblPlantsGene:Bra013717GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0016020GO:GO:0016021InterPro:IPR003388
InterPro:ReticulonPANTHER:PTHR10994PANTHER:PTHR10994:SF70PFAM:PF02453PFscan:PS50845SEG:seg
TMHMM:TMhelixUniParc:UPI0002545EC4UniProt:M4DB57MapMan:13.7.2.1::
Description
AT4G23630 (E=3e-129) BTI1 | BTI1 (VIRB2-INTERACTING PROTEIN 1)
Coordinates
chrA01:+:7362446..7363680
Molecular Weight (calculated)
30952.1 Da
IEP (calculated)
8.951
GRAVY (calculated)
-0.138
Length
276 amino acids
Sequence
(BLAST)
001: MAEEHKHDES VTAPEPAVEI VERESLMDKI SEKIHHGGDS SSSSSSSDEE EDKKKKKTKK PESPSSMKSK VYRLFGREKP VHKVLGGGKP ADIFMWKDKK
101: MSGGVLGGAT AAWVLFELME YHLLTLLCHV MIVVLAVLFL WSNATMFINK SPPKIPEVHI PEEPILQLAS GLRIEINRGL SSLREIASGR DLKKFLCAIF
201: GLWVLSIMGG WFNFLTLAYI ALVLLFTVPL VYDKYEDKVD PLGEKAMIEI KKQYAVLDEK VLSKIPMGPL KNKKKD
Best Arabidopsis Sequence Match ( AT4G23630.2 )
(BLAST)
001: MAEEHKHDES VIAPEPAVEV VERESLMDKI SEKIHHGGDS SSSSSSSDDE DEKKKTKKPS SPSSSMKSKV YRLFGREQPV HKVLGGGKPA DIFMWKNKKM
101: SGGVLGGATA AWVVFELMEY HLLTLLCHVM IVVLAVLFLW SNATMFINKS PPKIPEVHIP EEPILQLASG LRIEINRGFS SLREIASGRD LKKFLIAIAG
201: LWVLSILGGC FNFLTLAYIA LVLLFTVPLA YDKYEDKVDP LGEKAMIELK KQYAVLDEKV LSKIPLGPLK NKKKD
Arabidopsis Description
RTNLB1Reticulon-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178V247]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.