Skip to main content
crop-pal logo
Field mustard
Search for another protein from :
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 4
  • golgi 5
  • plasma membrane 7
  • endoplasmic reticulum 4
  • vacuole 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY12701 Canola plasma membrane 99.67 99.67
Bra004291.1-P Field mustard plasma membrane 61.59 88.15
AT1G68230.2 Thale cress plasma membrane 62.58 87.91
PGSC0003DMT400078544 Potato endoplasmic reticulum, plasma membrane, vacuole 22.85 44.81
Solyc05g008890.2.1 Tomato plasma membrane 32.12 43.89
KRH35899 Soybean plasma membrane 30.79 43.87
Os01t0139000-00 Rice plasma membrane 24.5 34.74
KXG33168 Sorghum golgi, peroxisome, plasma membrane 24.83 34.72
GSMUA_Achr2P07230_001 Banana golgi, plasma membrane, vacuole 23.84 34.29
EES02516 Sorghum peroxisome, plastid 24.5 33.95
GSMUA_Achr8P31770_001 Banana peroxisome 24.83 33.63
EES19907 Sorghum cytosol, peroxisome, plasma membrane 25.17 33.63
Bra037594.1-P Field mustard plasma membrane 24.83 33.48
TraesCS3D01G050800.1 Wheat mitochondrion 25.5 32.91
Os01t0691400-00 Rice cytosol, peroxisome 25.17 32.9
TraesCS3A01G261500.1 Wheat plasma membrane 23.84 32.88
TraesCS3B01G294700.1 Wheat plasma membrane 23.84 32.88
Zm00001d038910_P001 Maize plasma membrane 24.17 32.16
TraesCS3B01G060400.1 Wheat mitochondrion 25.17 32.07
HORVU3Hr1G064240.2 Barley plasma membrane 23.18 31.96
Zm00001d011631_P001 Maize golgi, peroxisome, plasma membrane 23.18 31.67
Bra003455.1-P Field mustard cytosol, peroxisome, plasma membrane 26.49 31.5
TraesCS1A01G373800.1 Wheat cytosol, peroxisome, plasma membrane 23.18 29.91
TraesCS1B01G393700.1 Wheat cytosol, peroxisome, plasma membrane 22.85 29.49
TraesCS1D01G380400.1 Wheat cytosol, peroxisome, plasma membrane 22.52 29.06
Bra004562.1-P Field mustard cytosol, peroxisome, plasma membrane 23.84 28.69
Bra040612.1-P Field mustard plasma membrane 16.56 27.32
Zm00001d008590_P001 Maize plastid 11.92 27.07
Bra000739.1-P Field mustard cytosol 23.84 26.97
Bra027757.1-P Field mustard cytosol, endoplasmic reticulum, peroxisome 21.85 26.4
Bra037369.1-P Field mustard cytosol 21.19 26.34
Bra019285.1-P Field mustard cytosol 22.85 25.75
VIT_01s0011g04030.t01 Wine grape cytosol 31.79 25.67
Bra003171.1-P Field mustard plasma membrane 17.22 25.62
GSMUA_AchrUn_... Banana golgi 29.8 25.57
Bra001748.1-P Field mustard plastid 16.56 25.51
Bra027678.1-P Field mustard cytosol, endoplasmic reticulum, nucleus 20.86 25.1
Bra013717.1-P Field mustard nucleus 22.85 25.0
Bra010539.1-P Field mustard cytosol 22.19 24.91
TraesCS3A01G051200.1 Wheat cytosol 27.15 24.85
Bra007047.1-P Field mustard golgi, plasma membrane, vacuole 16.56 24.39
HORVU3Hr1G008400.1 Barley cytosol, peroxisome 27.81 24.14
Bra034153.1-P Field mustard plasma membrane 17.22 23.32
Bra029827.1-P Field mustard plasma membrane 18.21 23.01
Bra029878.1-P Field mustard cytosol, peroxisome, plasma membrane 18.21 23.01
HORVU1Hr1G083110.3 Barley plastid 21.52 22.26
Bra022426.1-P Field mustard cytosol, plasma membrane, plastid 17.22 21.31
Bra035242.1-P Field mustard cytosol 11.59 17.5
Bra039207.1-P Field mustard plasma membrane 11.92 17.31
Protein Annotations
MapMan:13.7.2.1EnsemblPlantsGene:Bra033951EnsemblPlants:Bra033951.1EnsemblPlants:Bra033951.1-PGO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0016020GO:GO:0016021
InterPro:IPR003388UniProt:M4EYQ9PFAM:PF02453PFscan:PS50845PANTHER:PTHR10994PANTHER:PTHR10994:SF124
InterPro:ReticulonTMHMM:TMhelixUniParc:UPI00025462B8SEG:seg::
Description
AT1G68230 (E=2e-079) | reticulon family protein (RTNLB14)
Coordinates
chrA02:+:10660471..10662317
Molecular Weight (calculated)
35023.5 Da
IEP (calculated)
8.896
GRAVY (calculated)
0.117
Length
302 amino acids
Sequence
(BLAST)
001: MCRLTHWSIF CWTYADSTVL IATILYYLAH SMADTGGWEK HQNDGISMTT PADAPKQHNT YFDKAYNQHL FGFILAVLLR QGYQKGYIAI YGSEMDEHGA
101: SSSRKRRSLY HNLGGGHFAD VMFWKNKKES GTILAVFTLI WFLFEVVEYP FITFICQILL VSIFIFLIWS YIGSSQLIHR EPPSINDLKI SESTWRFLFN
201: KINWFIIKLY DISSGKDFRL LVLAVVSLWI LSVVGNYFSS LTLLYIVFVA LETIPILYEL YEEELNYAAS KSGRDMKKLF NDFNSKVINK IPKADAKTRR
301: HM
Best Arabidopsis Sequence Match ( AT1G68230.2 )
(BLAST)
001: MAVFGYEMDE HRASSSRRRR SLYHNLGGGR FADIMFWKNK KESGTILGVF TLIWFLFEVV EYPFITFLCQ ILLLFIFIFL IWSYIGSSQL IQSKPPSIND
101: LRISESNWRF LFNKINWFII KLYDISSGKD FRLLFLAVVS LWILSVVGNY FSSLTLLYIV FVGLETIPML YEQYEEELTY AASKSGRDMK KLLNKFNSKV
201: INKIPKAQAK TRRTM
Arabidopsis Description
RTNLB14Reticulon-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178WQE6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.