Factsheet for Zm00001d008590_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES02516	Sorghum	peroxisome, plastid	61.65	37.61
PGSC0003DMT400014404	Potato	cytosol, plasma membrane, vacuole	25.56	36.17
TraesCS3B01G060400.1	Wheat	mitochondrion	55.64	31.22
TraesCS3D01G050800.1	Wheat	mitochondrion	54.89	31.2
Os01t0139000-00	Rice	plasma membrane	47.37	29.58
GSMUA_Achr8P31770_001	Banana	peroxisome	36.84	21.97
TraesCS3A01G051200.1	Wheat	cytosol	54.14	21.82
GSMUA_Achr2P07230_001	Banana	golgi, plasma membrane, vacuole	33.08	20.95
KRH35899	Soybean	plasma membrane	33.08	20.75
HORVU3Hr1G008400.1	Barley	cytosol, peroxisome	54.14	20.69
Zm00001d011631_P001	Maize	golgi, peroxisome, plasma membrane	33.83	20.36
Zm00001d038910_P001	Maize	plasma membrane	34.59	20.26
Solyc03g119190.2.1	Tomato	plasma membrane	33.08	20.09
Zm00001d012776_P001	Maize	extracellular	37.59	19.76
Solyc05g008890.2.1	Tomato	plasma membrane	32.33	19.46
Zm00001d043551_P003	Maize	plasma membrane	37.59	19.46
Zm00001d042846_P001	Maize	plasma membrane	29.32	18.57
VIT_17s0000g03260.t01	Wine grape	plasma membrane	29.32	18.4
Zm00001d016041_P001	Maize	extracellular	31.58	18.26
Zm00001d038768_P001	Maize	extracellular, mitochondrion	33.83	17.72
Zm00001d034313_P001	Maize	cytosol, nucleus, plasma membrane	32.33	17.34
Zm00001d008982_P001	Maize	cytosol, nucleus, plasma membrane	36.09	17.2
KRH48561	Soybean	plasma membrane	28.57	17.12
CDX96038	Canola	plasma membrane	27.07	17.06
CDX75962	Canola	plasma membrane	28.57	16.96
CDY51936	Canola	endoplasmic reticulum, peroxisome, plasma membrane	28.57	16.96
CDX81500	Canola	plasma membrane	26.32	16.83
AT1G68230.2	Thale cress	plasma membrane	27.07	16.74
Zm00001d001901_P002	Maize	plasma membrane	24.81	16.67
Zm00001d039316_P001	Maize	cytosol, nucleus, plasma membrane	38.35	16.67
Zm00001d037848_P008	Maize	endoplasmic reticulum, nucleus, peroxisome	31.58	16.67
Zm00001d026575_P001	Maize	mitochondrion, peroxisome, plasma membrane, plastid, vacuole	24.81	16.67
Bra004291.1-P	Field mustard	plasma membrane	26.32	16.59
CDY67571	Canola	plasma membrane	27.82	16.52
Bra037594.1-P	Field mustard	plasma membrane	27.82	16.52
KRH39144	Soybean	plasma membrane	27.07	16.22
CDY66516	Canola	endoplasmic reticulum, extracellular	22.56	16.13
Zm00001d037453_P001	Maize	cytosol, peroxisome, plasma membrane	31.58	16.09
Zm00001d018781_P001	Maize	extracellular, mitochondrion	29.32	16.05
CDY01898	Canola	plasma membrane	24.81	15.57
AT3G18260.1	Thale cress	plasma membrane	26.32	15.56
Zm00001d039213_P001	Maize	golgi, plasma membrane, plastid	24.81	14.1
PGSC0003DMT400078544	Potato	endoplasmic reticulum, plasma membrane, vacuole	15.79	13.64
Zm00001d047517_P001	Maize	peroxisome	21.8	12.72
Zm00001d020729_P001	Maize	plasma membrane	9.02	12.63
Zm00001d020229_P001	Maize	plasma membrane	14.29	12.5
GSMUA_AchrUn_...	Banana	golgi	33.08	12.5
CDY12701	Canola	plasma membrane	27.07	11.92
Bra033951.1-P	Field mustard	plasma membrane	27.07	11.92
VIT_01s0011g04030.t01	Wine grape	cytosol	32.33	11.5

Protein Annotations

EnsemblPlants:Zm00001d008590_P001	EnsemblPlants:Zm00001d008590_T001	EnsemblPlantsGene:Zm00001d008590	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0016020	GO:GO:0016021	InterPro:IPR003388
InterPro:Reticulon	PANTHER:PTHR10994	PANTHER:PTHR10994:SF74	PFAM:PF02453	PFscan:PS50845	ProteinID:AQK90215.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI000845615E	UniProt:A0A1D6FE17	MapMan:13.7.2.1	:

Description

Reticulon-like protein B9

Coordinates

chr8:+:13707432..13709307

Molecular Weight (calculated)

14697.1 Da

IEP (calculated)

10.514

GRAVY (calculated)

0.241

Length

133 amino acids

Sequence
(BLAST)

001: MAAAAMNGHY LHAFGRERTT LHAALGGRRA ADVILWRDKA ASACILAAAT AAWGLFEVAE YHLVTVACYV AMVAMLVSFV WTNASAFFNM DRWYGIARPT
101: LTAKRMVMVC LGREPARTAT PMRMRARQPD KTM

Best Arabidopsis Sequence Match ( AT4G11220.1 )
(BLAST)

001: MADEHKHEES SPNLDPAVEV VERESLMEKL SEKIHHKGDS SSSSSSDDEN EKKSSSSSPK SLKSKVYRLF GRERPVHKVL GGGKPADIFM WKDKKMSGGV
101: FGGATVAWVL FELMEYHLLT LLCHVMIVAL AVLFLWSNAT MFIHKSPPKI PEVHIPEEPL LQLASGLRIE INRGISSLRE IASGRDIKKF LSAIAGLWVL
201: SILGGCYSFL TLAYIALVLL FTVPLFYDKY EDKVDSYGEK AMAELKKQYA VLDAKVFSKI PRGPLKDKKK D

Arabidopsis Description

RTNLB2Reticulon-like protein B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUT9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.