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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 3
  • plasma membrane 3
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
PProwler:secretory
TargetP:secretory
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra037594.1-P Field mustard plasma membrane 100.0 83.04
CDY67571 Canola plasma membrane 97.31 80.8
CDX75962 Canola plasma membrane 87.63 72.77
CDY51936 Canola endoplasmic reticulum, peroxisome, plasma membrane 86.56 71.88
AT3G18260.1 Thale cress plasma membrane 85.48 70.67
KRH48561 Soybean plasma membrane 52.15 43.69
Solyc03g119190.2.1 Tomato plasma membrane 50.54 42.92
VIT_17s0000g03260.t01 Wine grape plasma membrane 47.85 41.98
KRH39144 Soybean plasma membrane 50.0 41.89
GSMUA_Achr2P07230_001 Banana golgi, plasma membrane, vacuole 43.01 38.1
KXG33168 Sorghum golgi, peroxisome, plasma membrane 43.01 37.04
TraesCS3B01G294700.1 Wheat plasma membrane 43.01 36.53
EES19907 Sorghum cytosol, peroxisome, plasma membrane 43.55 35.84
TraesCS3A01G261500.1 Wheat plasma membrane 41.94 35.62
Zm00001d038910_P001 Maize plasma membrane 43.01 35.24
Zm00001d011631_P001 Maize golgi, peroxisome, plasma membrane 41.4 34.84
HORVU3Hr1G064240.2 Barley plasma membrane 40.86 34.7
Os01t0139000-00 Rice plasma membrane 39.25 34.27
Os01t0691400-00 Rice cytosol, peroxisome 42.47 34.2
TraesCS1D01G380400.1 Wheat cytosol, peroxisome, plasma membrane 41.94 33.33
GSMUA_Achr8P31770_001 Banana peroxisome 39.78 33.18
PGSC0003DMT400014404 Potato cytosol, plasma membrane, vacuole 16.67 32.98
TraesCS1A01G373800.1 Wheat cytosol, peroxisome, plasma membrane 41.4 32.91
TraesCS1B01G393700.1 Wheat cytosol, peroxisome, plasma membrane 41.4 32.91
EES02516 Sorghum peroxisome, plastid 38.17 32.57
TraesCS3D01G050800.1 Wheat mitochondrion 40.86 32.48
TraesCS3B01G060400.1 Wheat mitochondrion 40.86 32.07
CDX96038 Canola plasma membrane 36.02 31.75
CDX81500 Canola plasma membrane 35.48 31.73
CDY01898 Canola plasma membrane 36.02 31.6
CDY13240 Canola cytosol, peroxisome, plasma membrane 25.81 29.81
CDY08616 Canola plasma membrane 38.17 29.71
CDY00916 Canola plasma membrane 37.63 29.29
CDY53913 Canola cytosol, peroxisome, plasma membrane 37.63 27.56
CDY52012 Canola cytosol, peroxisome, plasma membrane 37.63 27.56
CDX79993 Canola cytosol, peroxisome, plasma membrane 36.56 27.09
CDY25557 Canola cytosol, endoplasmic reticulum, nucleus 36.02 26.69
CDY34396 Canola cytosol, endoplasmic reticulum, nucleus 36.02 26.69
CDY42012 Canola cytosol, peroxisome, plasma membrane 36.02 26.69
CDY38194 Canola cytosol, nucleus, plasma membrane 35.48 26.4
CDY08353 Canola cytosol, endoplasmic reticulum, nucleus 35.48 26.4
HORVU1Hr1G083110.3 Barley plastid 40.86 26.03
CDY22971 Canola plasma membrane 26.88 25.51
CDX82294 Canola plastid 26.88 25.51
CDY22970 Canola plasma membrane 26.88 25.51
CDX90792 Canola cytosol, peroxisome, plasma membrane 36.56 25.47
CDY57657 Canola cytosol, nucleus, plasma membrane 37.1 25.09
CDX82165 Canola endoplasmic reticulum, peroxisome, plasma membrane, plastid 33.33 25.0
CDY36282 Canola plasma membrane 29.57 24.66
CDY44123 Canola cytosol, nucleus, plasma membrane 36.56 24.64
CDY10954 Canola cytosol 35.48 24.44
CDY48510 Canola cytosol 31.72 24.28
CDY07184 Canola cytosol, peroxisome, plasma membrane 31.72 24.28
CDY46172 Canola plastid 26.34 24.26
CDX71213 Canola plasma membrane 26.34 24.14
CDX67589 Canola golgi, plasma membrane, vacuole 26.34 24.14
CDX99221 Canola plasma membrane 26.34 24.14
CDY48222 Canola cytosol, endoplasmic reticulum, plasma membrane 26.34 24.14
CDY24806 Canola cytosol 34.95 23.72
CDY41666 Canola cytosol 34.95 23.55
TraesCS3A01G051200.1 Wheat cytosol 41.4 23.33
CDY51584 Canola plasma membrane 25.27 23.15
CDX73507 Canola cytosol, golgi, plasma membrane 25.27 22.93
CDX78209 Canola golgi, plasma membrane, vacuole 25.27 22.93
CDX89122 Canola extracellular, mitochondrion 18.82 22.88
CDX76854 Canola plasma membrane 25.27 22.71
CDY00975 Canola cytosol, endoplasmic reticulum, peroxisome 29.03 22.59
Zm00001d008590_P001 Maize plastid 16.13 22.56
CDY08567 Canola cytosol 29.03 22.41
CDY12701 Canola plasma membrane 36.02 22.19
HORVU3Hr1G008400.1 Barley cytosol, peroxisome 40.86 21.84
CDY46067 Canola plasma membrane 24.19 21.63
CDY05135 Canola mitochondrion 36.02 21.41
CDY56712 Canola mitochondrion 37.63 19.72
GSMUA_AchrUn_... Banana golgi 37.1 19.6
CDX86802 Canola cytosol, nucleus, peroxisome 24.73 18.78
CDY62522 Canola cytosol 6.99 16.25
Protein Annotations
EnsemblPlants:CDY66516EnsemblPlantsGene:GSBRNA2T00054474001GO:A0A078JL57GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0016020GO:GO:0016021InterPro:IPR003388
InterPro:ReticulonPANTHER:PTHR10994PANTHER:PTHR10994:SF85PFAM:PF02453PFscan:PS50845ProteinID:CDY66516
ProteinID:CDY66516.1TMHMM:TMhelixUniParc:UPI0004EE168FUniProt:A0A078JL57MapMan:13.7.2.1:
Description
BnaAnng22410DReticulon-like protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JL57]
Coordinates
chrLK035304:-:16645..17541
Molecular Weight (calculated)
21455.7 Da
IEP (calculated)
8.058
GRAVY (calculated)
0.468
Length
186 amino acids
Sequence
(BLAST)
001: ADILLWREPK IAATLVIGVS LLWFLLEVVE YNFITLVCHA SMTSMLLFFI WSTASDFLNW ERPIIPVVVL DESSFKELAT SFHDRFNQIL SKLLDLACGR
101: DPPLFFLTTI SLYILSVIGT CINFMNLLFI GFVSMQTLPI MYEMYEDDVD RVASMLMRKM RKLYRKVDSN VLSKIPRGTV KSKKHA
Best Arabidopsis Sequence Match ( AT3G18260.1 )
(BLAST)
001: MPIFTGSSSD SEDERTIHKT TKLFTRQRSI HSIFGGGKVA DILLWREPKI AATLVIGVSI LWFLMEVVEY NFITLICHAS MTSMLFFFIW STASDFLNWE
101: RPLIPEVVLD ESSFKQLARS FHVRFNQILT KLLDVACGRD PPLFFLTTIS LYIVSIIGTY FNFVNLLFIG FVSMQTLPVM YEMYEDDVDT AAGKLMRKMK
201: KLYKKVDTNV LSKIPRGTVK NKKFT
Arabidopsis Description
RTNLB9Reticulon-like protein B9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJQ5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.