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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 2
  • plastid 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:mitochondrion, plasma membrane, plastid
PProwler:secretory
WoLF PSORT:cytosol
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra037369.1-P Field mustard cytosol 100.0 100.0
CDY07184 Canola cytosol, peroxisome, plasma membrane 98.77 98.77
AT4G01230.2 Thale cress cytosol 84.77 84.43
CDY52012 Canola cytosol, peroxisome, plasma membrane 51.85 49.61
CDX79993 Canola cytosol, peroxisome, plasma membrane 51.03 49.4
GSMUA_AchrUn_... Banana cytosol, nucleus, plasma membrane 52.26 49.22
CDY53913 Canola cytosol, peroxisome, plasma membrane 51.44 49.21
CDY42012 Canola cytosol, peroxisome, plasma membrane 50.62 49.0
Os01t0226300-01 Rice plasma membrane 34.98 47.75
GSMUA_Achr10P... Banana cytosol, endoplasmic reticulum, plasma membrane 48.97 47.22
KRH00872 Soybean endoplasmic reticulum 49.79 46.72
KRH40357 Soybean endoplasmic reticulum 49.38 46.69
GSMUA_Achr3P31920_001 Banana cytosol 41.56 46.12
KRH06560 Soybean endoplasmic reticulum 48.15 45.7
CDY25557 Canola cytosol, endoplasmic reticulum, nucleus 46.5 45.02
GSMUA_Achr8P27830_001 Banana cytosol, peroxisome, plasma membrane 46.5 45.02
GSMUA_Achr9P05440_001 Banana nucleus, peroxisome, plasma membrane 46.5 45.02
Os05t0526400-01 Rice plasma membrane 46.5 45.02
Solyc10g011870.2.1 Tomato cytosol, nucleus, plasma membrane 48.56 44.87
TraesCS3D01G279100.1 Wheat cytosol, nucleus, plasma membrane 45.68 44.76
Zm00001d043551_P003 Maize plasma membrane 47.33 44.75
PGSC0003DMT400049928 Potato cytosol, nucleus, plasma membrane 46.91 44.71
CDY38194 Canola cytosol, nucleus, plasma membrane 45.68 44.4
TraesCS1D01G349700.1 Wheat cytosol, nucleus, plasma membrane 45.27 44.35
TraesCS3A01G278800.1 Wheat golgi 45.27 44.35
Os01t0736900-01 Rice plasma membrane 46.09 44.27
Zm00001d012776_P001 Maize extracellular 46.09 44.27
CDY34396 Canola cytosol, endoplasmic reticulum, nucleus 45.68 44.22
TraesCS1B01G360800.1 Wheat cytosol, nucleus, plasma membrane 45.27 44.18
PGSC0003DMT400000230 Potato cytosol, nucleus, plasma membrane 48.15 44.15
CDY08353 Canola cytosol, endoplasmic reticulum, nucleus 45.27 44.0
KXG33320 Sorghum cytosol, nucleus, plasma membrane 46.5 43.8
Solyc01g095200.2.1 Tomato plastid 47.33 43.73
GSMUA_Achr4P08400_001 Banana cytosol 45.27 43.48
HORVU3Hr1G069970.2 Barley cytosol, nucleus, plasma membrane 45.27 43.14
TraesCS3B01G313000.1 Wheat cytosol, nucleus, plasma membrane 44.86 43.08
CDY44123 Canola cytosol, nucleus, plasma membrane 48.56 42.75
CDY57657 Canola cytosol, nucleus, plasma membrane 48.15 42.55
GSMUA_Achr6P31860_001 Banana cytosol, nucleus, plasma membrane 44.03 42.46
CDX90792 Canola cytosol, peroxisome, plasma membrane 46.5 42.32
Zm00001d020729_P001 Maize plasma membrane 16.46 42.11
CDY24806 Canola cytosol 47.33 41.97
CDY10954 Canola cytosol 46.5 41.85
EES19841 Sorghum cytosol, nucleus, plasma membrane 43.62 41.57
GSMUA_Achr5P06850_001 Banana cytosol, nucleus, plasma membrane 42.39 41.2
CDY41666 Canola cytosol 46.5 40.94
Zm00001d008982_P001 Maize cytosol, nucleus, plasma membrane 46.91 40.86
Zm00001d038768_P001 Maize extracellular, mitochondrion 42.39 40.55
KRG99174 Soybean endoplasmic reticulum, plasma membrane 14.4 40.23
TraesCS3B01G178100.1 Wheat cytosol, nucleus, plasma membrane 47.33 40.21
TraesCS3D01G159100.1 Wheat cytosol, nucleus, plasma membrane 47.33 40.21
KXG31516 Sorghum cytosol, nucleus, plasma membrane 46.91 40.14
Zm00001d016041_P001 Maize extracellular 37.45 39.57
KRH48008 Soybean cytosol, peroxisome, plasma membrane 49.79 38.53
Os02t0265900-01 Rice cytosol, peroxisome, plasma membrane 35.8 37.83
TraesCS1A01G346800.3 Wheat plasma membrane 39.09 37.7
OQU84758 Sorghum cytosol, peroxisome, plasma membrane 35.8 37.5
Zm00001d020229_P001 Maize plasma membrane 23.46 37.5
TraesCS7D01G337800.1 Wheat cytosol, peroxisome, plasma membrane, plastid 39.92 37.31
Zm00001d039316_P001 Maize cytosol, nucleus, plasma membrane 46.5 36.93
HORVU1Hr1G082010.3 Barley cytosol, nucleus, plasma membrane, plastid 39.51 36.78
TraesCS7A01G341800.1 Wheat cytosol, peroxisome, plasma membrane, plastid 39.09 36.54
TraesCS7B01G241100.1 Wheat cytosol, peroxisome, plasma membrane, plastid 39.09 36.54
CDY05135 Canola mitochondrion 46.91 36.42
CDY13240 Canola cytosol, peroxisome, plasma membrane 23.87 36.02
HORVU3Hr1G030760.2 Barley mitochondrion 46.5 35.99
CDY00916 Canola plasma membrane 34.98 35.56
TraesCS3A01G151200.1 Wheat cytosol, peroxisome, plasma membrane 46.91 35.4
VIT_02s0025g00590.t01 Wine grape mitochondrion 8.64 35.0
EER89811 Sorghum peroxisome 36.63 34.77
CDY08616 Canola plasma membrane 34.16 34.73
Os06t0503400-01 Rice plasma membrane 37.45 34.34
CDX75962 Canola plasma membrane 30.45 33.04
CDY67571 Canola plasma membrane 30.45 33.04
Zm00001d037453_P001 Maize cytosol, peroxisome, plasma membrane 35.39 32.95
CDY51936 Canola endoplasmic reticulum, peroxisome, plasma membrane 30.04 32.59
HORVU7Hr1G081290.4 Barley plastid 30.86 32.47
CDX67589 Canola golgi, plasma membrane, vacuole 26.75 32.02
CDY66516 Canola endoplasmic reticulum, extracellular 24.28 31.72
CDY51584 Canola plasma membrane 26.34 31.53
HORVU7Hr1G075700.2 Barley mitochondrion 38.68 31.33
CDX81500 Canola plasma membrane 25.93 30.29
CDX78209 Canola golgi, plasma membrane, vacuole 25.51 30.24
CDX96038 Canola plasma membrane 25.51 29.38
CDX73507 Canola cytosol, golgi, plasma membrane 24.69 29.27
CDY01898 Canola plasma membrane 25.1 28.77
CDX99221 Canola plasma membrane 23.46 28.08
CDY46172 Canola plastid 23.05 27.72
CDY62522 Canola cytosol 9.05 27.5
CDX86802 Canola cytosol, nucleus, peroxisome 27.57 27.35
CDX82294 Canola plastid 21.81 27.04
CDX89122 Canola extracellular, mitochondrion 16.46 26.14
CDY08567 Canola cytosol 25.93 26.14
CDX71213 Canola plasma membrane 21.81 26.11
CDY22970 Canola plasma membrane 20.99 26.02
CDY22971 Canola plasma membrane 20.99 26.02
CDY36282 Canola plasma membrane 23.87 26.01
CDY00975 Canola cytosol, endoplasmic reticulum, peroxisome 25.51 25.94
CDY48222 Canola cytosol, endoplasmic reticulum, plasma membrane 20.99 25.12
CDX82165 Canola endoplasmic reticulum, peroxisome, plasma membrane, plastid 25.1 24.6
CDY56712 Canola mitochondrion 35.8 24.51
GSMUA_Achr3P15760_001 Banana cytosol 14.81 24.0
CDY12701 Canola plasma membrane 26.34 21.19
CDY46067 Canola plasma membrane 15.64 18.27
CDX76854 Canola plasma membrane 15.23 17.87
Protein Annotations
EnsemblPlants:CDY48510EnsemblPlantsGene:GSBRNA2T00091213001GO:A0A078ICC4GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0016020GO:GO:0016021InterPro:IPR003388
InterPro:ReticulonPANTHER:PTHR10994PANTHER:PTHR10994:SF95PFAM:PF02453PFscan:PS50845ProteinID:CDY48510
ProteinID:CDY48510.1TMHMM:TMhelixUniParc:UPI0002541A3EUniProt:A0A078ICC4MapMan:13.7.2.1:
Description
BnaA09g00130DReticulon-like protein [Source:UniProtKB/TrEMBL;Acc:A0A078ICC4]
Coordinates
chrLK032776:-:82566..83699
Molecular Weight (calculated)
27607.1 Da
IEP (calculated)
6.166
GRAVY (calculated)
0.234
Length
243 amino acids
Sequence
(BLAST)
001: MEKEEEKLER VGPLEEPLMK NIVPEEDSLS MSDTDSEIPD SPVPINAPIY RMFGRERPIH MVLGGGKPAD VLLWRDKKVT AGLVGAVTVI WLLFGFGHCR
101: LLTFVCRGSI LFLLLSFVWS NALNRSPEKI MEIYIPEKPL LQAASALTFE VNCALATLRS IALERDIKNF ALVVIGLWLV SIIGSWFSFL SLIYICFVLI
201: HTVPKLYEKY EDEIDPIAEK AVIEMKKHFQ VLEAKFLNKS HHH
Best Arabidopsis Sequence Match ( AT4G01230.2 )
(BLAST)
001: MEEEKLEIVG PLEEPLMGNI VPEEINGLDS LTSSDSDSEK PDSPVPINAP IYRMFGRERP IHMVLGGGKP ADVLLWRDKK VTLGLLSAVT VIWLLFGFGG
101: RRLLTSLCRG SILFLLLSFL WSNALNKSPE NMMDIYIPEK PLLQAASAMT FELNCAFATL RSIALERDIK NFVMAVIGLW LVSVIGNWFS FLSLLYICFV
201: LIHTVPMLYE KYEDEIDPIA EKAVIEMKKH YQVFEAKFLS KIPH
Arabidopsis Description
RTNLB7Reticulon-like protein B7 [Source:UniProtKB/Swiss-Prot;Acc:Q9M145]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.