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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • plasma membrane 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:cytosol
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr1P00860_001
GSMUA_Achr1P04070_001
GSMUA_Achr1P24970_001
GSMUA_Achr1P25230_001
GSMUA_Achr2P07050_001
GSMUA_Achr3P15760_001
GSMUA_Achr3P31920_001
GSMUA_Achr4P08400_001
GSMUA_Achr4P16430_001
GSMUA_Achr4P20820_001
GSMUA_Achr4P22340_001
GSMUA_Achr4P27140_001
GSMUA_Achr4P30410_001
GSMUA_Achr5P06850_001
GSMUA_Achr5P15070_001
GSMUA_Achr5P23170_001
GSMUA_Achr6P31860_001
GSMUA_Achr6P34270_001
GSMUA_Achr7P01900_001
GSMUA_Achr7P09070_001
GSMUA_Achr7P17170_001
GSMUA_Achr7P17180_001
GSMUA_Achr7P18540_001
GSMUA_Achr8P00730_001
GSMUA_Achr8P02620_001
GSMUA_Achr8P27830_001
GSMUA_Achr8P29730_001
GSMUA_Achr8P29900_001
GSMUA_Achr9P03220_001
GSMUA_Achr9P05440_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G11220.1 GSMUA_Achr1P24970_001 AT1G09330.1 21798944
AT4G11220.1 GSMUA_Achr2P07050_001 AT1G09330.1 21798944
AT4G11220.1 GSMUA_Achr8P29900_001 AT1G09330.1 21798944
AT4G11220.1 GSMUA_Achr4P22340_001 AT3G59500.1 21798944
AT4G11220.1 GSMUA_Achr5P15070_001 AT3G59500.1 21798944
AT5G41600.1 GSMUA_Achr7P09070_001 AT1G55190.1 21798944
AT5G41600.1 GSMUA_Achr10P... AT1G77350.1 21798944
AT5G41600.1 GSMUA_Achr4P16430_001 AT2G03120.1 21798944
AT5G41600.1 GSMUA_Achr5P23170_001 AT2G39960.1 21798944
AT5G41600.1 GSMUA_Achr7P18540_001 AT2G39960.1 21798944
AT5G41600.1 GSMUA_Achr1P00860_001 AT2G46890.1 21798944
AT5G41600.1 GSMUA_Achr1P25230_001 AT3G02420.1 21798944
AT5G41600.1 GSMUA_Achr7P17170_001 AT3G02420.1 21798944
AT5G41600.1 GSMUA_Achr7P17180_001 AT3G02420.1 21798944
AT5G41600.1 GSMUA_Achr8P29730_001 AT3G02420.1 21798944
AT5G41600.1 GSMUA_Achr4P20820_001 AT3G07950.1 21798944
AT5G41600.1 GSMUA_Achr7P01900_001 AT3G07950.1 21798944
AT5G41600.1 GSMUA_Achr8P00730_001 AT3G27080.1 21798944
AT5G41600.1 GSMUA_Achr10P... AT3G46060.1 21798944
AT5G41600.1 GSMUA_Achr10P... AT3G46060.1 21798944
AT5G41600.1 GSMUA_Achr11P... AT3G46060.1 21798944
AT5G41600.1 GSMUA_Achr6P34270_001 AT3G46060.1 21798944
AT5G41600.1 GSMUA_Achr8P02620_001 AT3G46060.1 21798944
AT5G41600.1 GSMUA_Achr9P03220_001 AT3G46060.1 21798944
AT5G41600.1 GSMUA_AchrUn_... AT3G46060.1 21798944
AT5G41600.1 GSMUA_Achr4P22340_001 AT3G59500.1 21798944
AT5G41600.1 GSMUA_Achr5P15070_001 AT3G59500.1 21798944
AT5G41600.1 GSMUA_Achr10P... AT5G41600.1 21798944
AT5G41600.1 GSMUA_Achr3P15760_001 AT5G41600.1 21798944
AT5G41600.1 GSMUA_Achr3P31920_001 AT5G41600.1 21798944
AT5G41600.1 GSMUA_Achr4P08400_001 AT5G41600.1 21798944
AT5G41600.1 GSMUA_Achr5P06850_001 AT5G41600.1 21798944
AT5G41600.1 GSMUA_Achr6P31860_001 AT5G41600.1 21798944
AT5G41600.1 GSMUA_Achr8P27830_001 AT5G41600.1 21798944
AT5G41600.1 GSMUA_Achr9P05440_001 AT5G41600.1 21798944
AT5G41600.1 GSMUA_AchrUn_... AT5G41600.1 21798944
AT5G41600.1 GSMUA_Achr11P... AT5G53560.1 21798944
AT5G41600.1 GSMUA_Achr1P04070_001 AT5G53560.1 21798944
AT5G41600.1 GSMUA_Achr4P27140_001 AT5G53560.1 21798944
AT5G41600.1 GSMUA_Achr4P30410_001 AT5G53560.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_AchrUn_... Banana cytosol, nucleus, plasma membrane 77.47 75.97
GSMUA_Achr8P27830_001 Banana cytosol, peroxisome, plasma membrane 71.94 72.51
GSMUA_Achr9P05440_001 Banana nucleus, peroxisome, plasma membrane 70.75 71.31
GSMUA_Achr6P31860_001 Banana cytosol, nucleus, plasma membrane 68.77 69.05
GSMUA_Achr3P31920_001 Banana cytosol 58.5 67.58
VIT_15s0046g01760.t01 Wine grape cytosol, peroxisome, plasma membrane 66.01 65.49
KRH41254 Soybean cytosol, nucleus, plasma membrane 64.82 64.57
KRH59988 Soybean mitochondrion 64.43 64.17
Solyc03g007740.2.1 Tomato nucleus 64.03 63.53
VIT_02s0025g00640.t01 Wine grape cytosol, nucleus, plasma membrane 62.85 63.1
PGSC0003DMT400051387 Potato cytosol, nucleus, plasma membrane 63.24 62.75
AT5G41600.1 Thale cress cytosol, nucleus, plasma membrane 62.85 61.87
PGSC0003DMT400049928 Potato cytosol, nucleus, plasma membrane 62.06 61.57
Solyc01g095200.2.1 Tomato plastid 63.24 60.84
CDY25557 Canola cytosol, endoplasmic reticulum, nucleus 60.08 60.56
Solyc06g036430.2.1 Tomato cytosol, nucleus, plasma membrane 60.47 60.47
GSMUA_Achr10P... Banana cytosol, endoplasmic reticulum, plasma membrane 60.08 60.32
PGSC0003DMT400000230 Potato cytosol, nucleus, plasma membrane 62.45 59.62
Bra027678.1-P Field mustard cytosol, endoplasmic reticulum, nucleus 58.89 59.36
CDY34396 Canola cytosol, endoplasmic reticulum, nucleus 58.89 59.36
Solyc10g011870.2.1 Tomato cytosol, nucleus, plasma membrane 61.66 59.32
PGSC0003DMT400074360 Potato cytosol, nucleus, plasma membrane 59.29 59.29
CDY08353 Canola cytosol, endoplasmic reticulum, nucleus 58.5 59.2
CDY38194 Canola cytosol, nucleus, plasma membrane 58.5 59.2
KRH40357 Soybean endoplasmic reticulum 60.08 59.14
Bra027757.1-P Field mustard cytosol, endoplasmic reticulum, peroxisome 58.1 58.8
CDY52012 Canola cytosol, peroxisome, plasma membrane 58.5 58.27
CDX79993 Canola cytosol, peroxisome, plasma membrane 57.71 58.17
Bra004562.1-P Field mustard cytosol, peroxisome, plasma membrane 57.71 58.17
KRH00872 Soybean endoplasmic reticulum 59.29 57.92
PGSC0003DMT400032086 Potato cytosol, nucleus, plasma membrane 61.66 57.78
Solyc08g081730.2.1 Tomato endoplasmic reticulum, plastid 61.66 57.78
CDY42012 Canola cytosol, peroxisome, plasma membrane 57.31 57.77
Bra003455.1-P Field mustard cytosol, peroxisome, plasma membrane 57.71 57.48
CDY53913 Canola cytosol, peroxisome, plasma membrane 57.71 57.48
KRH06560 Soybean endoplasmic reticulum 57.71 57.03
AT3G61560.1 Thale cress cytosol, nucleus, plasma membrane 56.52 56.52
AT2G46170.1 Thale cress cytosol, nucleus, plasma membrane 56.92 56.47
VIT_16s0050g01790.t01 Wine grape cytosol, nucleus, plasma membrane 55.73 55.51
KRG99174 Soybean endoplasmic reticulum, plasma membrane 18.97 55.17
AT1G64090.2 Thale cress cytosol, endoplasmic reticulum, nucleus 58.89 54.98
Bra000739.1-P Field mustard cytosol 57.71 54.68
AT4G23630.2 Thale cress nucleus 59.29 54.55
GSMUA_Achr5P06850_001 Banana cytosol, nucleus, plasma membrane 53.75 54.4
CDX90792 Canola cytosol, peroxisome, plasma membrane 57.31 54.31
CDY44123 Canola cytosol, nucleus, plasma membrane 58.89 53.99
Bra010539.1-P Field mustard cytosol 57.31 53.9
AT4G11220.1 Thale cress nucleus 57.71 53.87
Bra013717.1-P Field mustard nucleus 58.5 53.62
CDY57657 Canola cytosol, nucleus, plasma membrane 58.1 53.45
Bra019285.1-P Field mustard cytosol 56.13 52.99
CDY10954 Canola cytosol 56.52 52.96
CDY24806 Canola cytosol 57.31 52.92
CDY41666 Canola cytosol 57.31 52.54
KRH35223 Soybean cytosol, nucleus, plasma membrane 51.38 52.0
CDY13240 Canola cytosol, peroxisome, plasma membrane 32.81 51.55
GSMUA_Achr6P15870_001 Banana golgi, peroxisome, plasma membrane 48.22 49.19
GSMUA_Achr10P... Banana golgi, peroxisome, plasma membrane 47.83 48.79
GSMUA_Achr5P07570_001 Banana golgi, peroxisome, plasma membrane 47.43 48.39
KRH48008 Soybean cytosol, peroxisome, plasma membrane 59.68 48.09
GSMUA_Achr10P... Banana cytosol, endoplasmic reticulum, peroxisome 37.55 47.98
CDY62522 Canola cytosol 15.02 47.5
VIT_02s0025g00590.t01 Wine grape mitochondrion 11.07 46.67
GSMUA_Achr3P15760_001 Banana cytosol 27.27 46.0
AT4G01230.2 Thale cress cytosol 44.27 45.9
CDY05135 Canola mitochondrion 56.13 45.37
CDY48510 Canola cytosol 43.48 45.27
CDY07184 Canola cytosol, peroxisome, plasma membrane 43.48 45.27
Bra037369.1-P Field mustard cytosol 43.48 45.27
GSMUA_Achr6P04560_001 Banana cytosol, peroxisome, plasma membrane 40.32 41.13
GSMUA_Achr9P10200_001 Banana cytosol, peroxisome, plasma membrane 37.15 38.84
Bra035242.1-P Field mustard cytosol 30.43 38.5
GSMUA_Achr8P31770_001 Banana peroxisome 33.2 37.67
GSMUA_Achr2P07230_001 Banana golgi, plasma membrane, vacuole 31.23 37.62
CDX86802 Canola cytosol, nucleus, peroxisome 36.36 37.55
KRG91601 Soybean mitochondrion 49.41 36.76
VIT_07s0031g02730.t01 Wine grape golgi, mitochondrion, nucleus, plasma membrane 24.11 33.89
GSMUA_Achr7P05440_001 Banana peroxisome, plasma membrane, vacuole 28.06 31.84
GSMUA_Achr3P09820_001 Banana cytosol, peroxisome, plasma membrane 28.06 30.87
GSMUA_Achr10P... Banana plasma membrane 27.67 30.43
GSMUA_Achr8P02250_001 Banana cytosol, mitochondrion, peroxisome, plasma membrane 28.06 28.74
CDX89122 Canola extracellular, mitochondrion 17.0 28.1
GSMUA_Achr6P33560_001 Banana plasma membrane 28.46 27.27
GSMUA_Achr4P20190_001 Banana cytosol, plastid 27.27 24.47
GSMUA_AchrUn_... Banana golgi 31.62 22.73
Protein Annotations
EnsemblPlants:GSMUA_Achr4P08400_001EnsemblPlants:GSMUA_Achr4T08400_001EnsemblPlantsGene:GSMUA_Achr4G08400_001GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0016020GO:GO:0016021InterPro:IPR003388
InterPro:ReticulonPANTHER:PTHR10994PANTHER:PTHR10994:SF70PFAM:PF02453PFscan:PS50845SEG:seg
TMHMM:TMhelixUniParc:UPI000294F1D4UniProt:M0SM57MapMan:13.7.2.1::
Description
Reticulon-like protein B2 [Source:GMGC_GENE;Acc:GSMUA_Achr4G08400_001]
Coordinates
chr4:+:6170024..6171736
Molecular Weight (calculated)
28481.9 Da
IEP (calculated)
9.440
GRAVY (calculated)
0.197
Length
253 amino acids
Sequence
(BLAST)
001: MAEHREESLL EKITEKFHGR HSSSVVDSDD EKSSRGPSAA AEAVKAKIYR LFGREKPVHK VLGGGKPADV FLWRNKKVSA STFGAVTAIW VFFELMEYHL
101: ITLVCHGLIL SLAIIFLWCN ATTFISKSRP HVPEVSISED LALNVVLSLR YVINRGLVAL RDIASGRDLK KFLAAAAALW VLSIIANCCS FLMLFYIAFV
201: ALYTVPVLYE KYEDRVDAFA EKAEAEFKKH YVVIHVKYLS KIPMGPLKDK KFQ
Best Arabidopsis Sequence Match ( AT4G11220.1 )
(BLAST)
001: MADEHKHEES SPNLDPAVEV VERESLMEKL SEKIHHKGDS SSSSSSDDEN EKKSSSSSPK SLKSKVYRLF GRERPVHKVL GGGKPADIFM WKDKKMSGGV
101: FGGATVAWVL FELMEYHLLT LLCHVMIVAL AVLFLWSNAT MFIHKSPPKI PEVHIPEEPL LQLASGLRIE INRGISSLRE IASGRDIKKF LSAIAGLWVL
201: SILGGCYSFL TLAYIALVLL FTVPLFYDKY EDKVDSYGEK AMAELKKQYA VLDAKVFSKI PRGPLKDKKK D
Arabidopsis Description
RTNLB2Reticulon-like protein B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUT9]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.