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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:
  • plastid 1
  • golgi 2
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, peroxisome, plasma membrane
Any Predictor:peroxisome, plastid, secretory
BaCelLo:plastid
MultiLoc:golgi
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr10P... Banana cytosol, endoplasmic reticulum, peroxisome 64.92 81.31
GSMUA_Achr10P... Banana golgi, peroxisome, plasma membrane 73.39 73.39
GSMUA_Achr5P07570_001 Banana golgi, peroxisome, plasma membrane 71.37 71.37
HORVU1Hr1G017470.2 Barley cytosol, endoplasmic reticulum, nucleus 60.89 61.13
KXG21632 Sorghum nucleus, peroxisome, plasma membrane 60.89 60.89
Zm00001d037848_P008 Maize endoplasmic reticulum, nucleus, peroxisome 60.89 59.92
TraesCS1A01G081500.1 Wheat cytosol, endoplasmic reticulum, nucleus 60.48 59.76
TraesCS1B01G099200.1 Wheat cytosol, endoplasmic reticulum, nucleus 60.08 59.6
Os05t0312500-01 Rice plasma membrane 59.68 58.96
GSMUA_Achr8P27830_001 Banana cytosol, peroxisome, plasma membrane 54.03 53.39
GSMUA_Achr10P... Banana cytosol, endoplasmic reticulum, plasma membrane 53.23 52.38
GSMUA_AchrUn_... Banana cytosol, nucleus, plasma membrane 54.44 52.33
TraesCS1D01G083100.2 Wheat mitochondrion 60.48 51.9
GSMUA_Achr9P05440_001 Banana nucleus, peroxisome, plasma membrane 52.42 51.79
Solyc09g055250.2.1 Tomato cytosol, endoplasmic reticulum, peroxisome 50.4 51.23
GSMUA_Achr3P31920_001 Banana cytosol 45.16 51.14
PGSC0003DMT400016142 Potato endoplasmic reticulum, golgi, peroxisome 50.0 50.82
GSMUA_Achr6P31860_001 Banana cytosol, nucleus, plasma membrane 50.81 50.0
GSMUA_Achr5P06850_001 Banana cytosol, nucleus, plasma membrane 49.6 49.2
GSMUA_Achr4P08400_001 Banana cytosol 49.19 48.22
Solyc06g082740.2.1 Tomato nucleus 43.15 46.72
GSMUA_Achr6P04560_001 Banana cytosol, peroxisome, plasma membrane 40.32 40.32
GSMUA_Achr2P07230_001 Banana golgi, plasma membrane, vacuole 33.87 40.0
GSMUA_Achr8P31770_001 Banana peroxisome 34.68 38.56
KRH30696 Soybean plasma membrane 37.5 37.8
GSMUA_Achr9P10200_001 Banana cytosol, peroxisome, plasma membrane 36.29 37.19
GSMUA_Achr3P15760_001 Banana cytosol 22.18 36.67
GSMUA_Achr3P09820_001 Banana cytosol, peroxisome, plasma membrane 31.85 34.35
GSMUA_Achr7P05440_001 Banana peroxisome, plasma membrane, vacuole 28.63 31.84
GSMUA_Achr10P... Banana plasma membrane 27.42 29.57
GSMUA_Achr8P02250_001 Banana cytosol, mitochondrion, peroxisome, plasma membrane 27.42 27.53
GSMUA_Achr4P20190_001 Banana cytosol, plastid 30.24 26.6
GSMUA_Achr6P33560_001 Banana plasma membrane 27.42 25.76
GSMUA_AchrUn_... Banana golgi 33.47 23.58
Protein Annotations
EnsemblPlants:GSMUA_Achr6P15870_001EnsemblPlants:GSMUA_Achr6T15870_001EnsemblPlantsGene:GSMUA_Achr6G15870_001GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0016020GO:GO:0016021InterPro:IPR003388
InterPro:ReticulonPANTHER:PTHR10994PANTHER:PTHR10994:SF70PFAM:PF02453PFscan:PS50845SEG:seg
TMHMM:TMhelixUniParc:UPI00029545BAUniProt:M0T7D5MapMan:13.7.2.1::
Description
Reticulon-like protein B1 [Source:GMGC_GENE;Acc:GSMUA_Achr6G15870_001]
Coordinates
chr6:+:10608869..10613397
Molecular Weight (calculated)
28148.2 Da
IEP (calculated)
8.915
GRAVY (calculated)
0.157
Length
248 amino acids
Sequence
(BLAST)
001: MIQVTMSEVG DLKKINEKIH EYQGSSSSSD SDDEKPSFQN SRKKRLFGRK DTVHTVLGGG KSADIILWRN KQLSGSILTG VTVIWLLFVW MGYHLLTFIC
101: HFLILVLAVS FLWSNGASFV NRSPPKFPEV VLPEDLFITI AQSVRYEINE ALATFYYVAC GKDLKRFLTV IAGLWILSVI GSWFSFLTLF YIGFLILYTG
201: PVFYENYEDH VDTAAEKAIH AINKQYAVLD AKVLQKIPYG TFANKKQH
Best Arabidopsis Sequence Match ( AT2G46170.1 )
(BLAST)
001: MAEEIEKSVP TEESLMEKIS EKIHHHDSSS SSESEYEKPD SPSAVKAKIY RMFGREKPVH KVLGGGKPAD VFLWRDKKLS GAVLGVATAI WVLFELVEYH
101: LLSLLCHISI LALGGLFLWS NAHTLINKTS PQIPEIHVPE EAFLVVASSL RNELNQAFVI LRSIALGRDL KKFLMVVVGL WIISVVGNWF NFLTLVYICF
201: VILHTVPMLY EKHEDKVDPL AEKAMKELQK QYVVFDEKVL SKIPIASLKA KAKLG
Arabidopsis Description
RTNLB5Reticulon-like protein B5 [Source:UniProtKB/Swiss-Prot;Acc:O82352]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.