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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • endoplasmic reticulum 2
  • plasma membrane 3
  • plastid 1
  • extracellular 1
  • vacuole 1
  • golgi 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, endoplasmic reticulum, plasma membrane
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:nucleus
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane, plastid
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr1P00860_001
GSMUA_Achr1P04070_001
GSMUA_Achr1P24970_001
GSMUA_Achr1P25230_001
GSMUA_Achr2P07050_001
GSMUA_Achr3P15760_001
GSMUA_Achr3P31920_001
GSMUA_Achr4P08400_001
GSMUA_Achr4P16430_001
GSMUA_Achr4P20820_001
GSMUA_Achr4P22340_001
GSMUA_Achr4P27140_001
GSMUA_Achr4P30410_001
GSMUA_Achr5P06850_001
GSMUA_Achr5P15070_001
GSMUA_Achr5P23170_001
GSMUA_Achr6P31860_001
GSMUA_Achr6P34270_001
GSMUA_Achr7P01900_001
GSMUA_Achr7P09070_001
GSMUA_Achr7P17170_001
GSMUA_Achr7P17180_001
GSMUA_Achr7P18540_001
GSMUA_Achr8P00730_001
GSMUA_Achr8P02620_001
GSMUA_Achr8P27830_001
GSMUA_Achr8P29730_001
GSMUA_Achr8P29900_001
GSMUA_Achr9P03220_001
GSMUA_Achr9P05440_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G11220.1 GSMUA_Achr1P24970_001 AT1G09330.1 21798944
AT4G11220.1 GSMUA_Achr2P07050_001 AT1G09330.1 21798944
AT4G11220.1 GSMUA_Achr8P29900_001 AT1G09330.1 21798944
AT4G11220.1 GSMUA_Achr4P22340_001 AT3G59500.1 21798944
AT4G11220.1 GSMUA_Achr5P15070_001 AT3G59500.1 21798944
AT5G41600.1 GSMUA_Achr7P09070_001 AT1G55190.1 21798944
AT5G41600.1 GSMUA_Achr10P... AT1G77350.1 21798944
AT5G41600.1 GSMUA_Achr4P16430_001 AT2G03120.1 21798944
AT5G41600.1 GSMUA_Achr5P23170_001 AT2G39960.1 21798944
AT5G41600.1 GSMUA_Achr7P18540_001 AT2G39960.1 21798944
AT5G41600.1 GSMUA_Achr1P00860_001 AT2G46890.1 21798944
AT5G41600.1 GSMUA_Achr1P25230_001 AT3G02420.1 21798944
AT5G41600.1 GSMUA_Achr7P17170_001 AT3G02420.1 21798944
AT5G41600.1 GSMUA_Achr7P17180_001 AT3G02420.1 21798944
AT5G41600.1 GSMUA_Achr8P29730_001 AT3G02420.1 21798944
AT5G41600.1 GSMUA_Achr4P20820_001 AT3G07950.1 21798944
AT5G41600.1 GSMUA_Achr7P01900_001 AT3G07950.1 21798944
AT5G41600.1 GSMUA_Achr8P00730_001 AT3G27080.1 21798944
AT5G41600.1 GSMUA_Achr10P... AT3G46060.1 21798944
AT5G41600.1 GSMUA_Achr10P... AT3G46060.1 21798944
AT5G41600.1 GSMUA_Achr11P... AT3G46060.1 21798944
AT5G41600.1 GSMUA_Achr6P34270_001 AT3G46060.1 21798944
AT5G41600.1 GSMUA_Achr8P02620_001 AT3G46060.1 21798944
AT5G41600.1 GSMUA_Achr9P03220_001 AT3G46060.1 21798944
AT5G41600.1 GSMUA_AchrUn_... AT3G46060.1 21798944
AT5G41600.1 GSMUA_Achr4P22340_001 AT3G59500.1 21798944
AT5G41600.1 GSMUA_Achr5P15070_001 AT3G59500.1 21798944
AT5G41600.1 GSMUA_Achr10P... AT5G41600.1 21798944
AT5G41600.1 GSMUA_Achr3P15760_001 AT5G41600.1 21798944
AT5G41600.1 GSMUA_Achr3P31920_001 AT5G41600.1 21798944
AT5G41600.1 GSMUA_Achr4P08400_001 AT5G41600.1 21798944
AT5G41600.1 GSMUA_Achr5P06850_001 AT5G41600.1 21798944
AT5G41600.1 GSMUA_Achr6P31860_001 AT5G41600.1 21798944
AT5G41600.1 GSMUA_Achr8P27830_001 AT5G41600.1 21798944
AT5G41600.1 GSMUA_Achr9P05440_001 AT5G41600.1 21798944
AT5G41600.1 GSMUA_AchrUn_... AT5G41600.1 21798944
AT5G41600.1 GSMUA_Achr11P... AT5G53560.1 21798944
AT5G41600.1 GSMUA_Achr1P04070_001 AT5G53560.1 21798944
AT5G41600.1 GSMUA_Achr4P27140_001 AT5G53560.1 21798944
AT5G41600.1 GSMUA_Achr4P30410_001 AT5G53560.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr5P06850_001 Banana cytosol, nucleus, plasma membrane 67.46 68.0
GSMUA_AchrUn_... Banana cytosol, nucleus, plasma membrane 67.86 66.28
GSMUA_Achr8P27830_001 Banana cytosol, peroxisome, plasma membrane 65.08 65.34
VIT_15s0046g01760.t01 Wine grape cytosol, peroxisome, plasma membrane 65.87 65.1
VIT_02s0025g00640.t01 Wine grape cytosol, nucleus, plasma membrane 65.08 65.08
KRH59988 Soybean mitochondrion 65.48 64.96
GSMUA_Achr9P05440_001 Banana nucleus, peroxisome, plasma membrane 64.68 64.94
KRH41254 Soybean cytosol, nucleus, plasma membrane 65.08 64.57
GSMUA_Achr6P31860_001 Banana cytosol, nucleus, plasma membrane 64.29 64.29
Solyc03g007740.2.1 Tomato nucleus 64.68 63.92
PGSC0003DMT400051387 Potato cytosol, nucleus, plasma membrane 63.49 62.75
Solyc01g095200.2.1 Tomato plastid 65.48 62.74
PGSC0003DMT400000230 Potato cytosol, nucleus, plasma membrane 65.48 62.26
CDY08353 Canola cytosol, endoplasmic reticulum, nucleus 61.51 62.0
PGSC0003DMT400049928 Potato cytosol, nucleus, plasma membrane 62.7 61.96
CDY25557 Canola cytosol, endoplasmic reticulum, nucleus 61.51 61.75
GSMUA_Achr3P31920_001 Banana cytosol 53.57 61.64
AT5G41600.1 Thale cress cytosol, nucleus, plasma membrane 62.3 61.09
KRH00872 Soybean endoplasmic reticulum 62.7 61.0
Solyc06g036430.2.1 Tomato cytosol, nucleus, plasma membrane 61.11 60.87
KRH40357 Soybean endoplasmic reticulum 61.9 60.7
Bra027678.1-P Field mustard cytosol, endoplasmic reticulum, nucleus 60.32 60.56
CDY34396 Canola cytosol, endoplasmic reticulum, nucleus 60.32 60.56
Solyc10g011870.2.1 Tomato cytosol, nucleus, plasma membrane 63.1 60.46
CDY38194 Canola cytosol, nucleus, plasma membrane 59.92 60.4
PGSC0003DMT400074360 Potato cytosol, nucleus, plasma membrane 60.32 60.08
GSMUA_Achr4P08400_001 Banana cytosol 60.32 60.08
Bra027757.1-P Field mustard cytosol, endoplasmic reticulum, peroxisome 59.13 59.6
PGSC0003DMT400032086 Potato cytosol, nucleus, plasma membrane 63.49 59.26
Solyc08g081730.2.1 Tomato endoplasmic reticulum, plastid 63.49 59.26
AT2G46170.1 Thale cress cytosol, nucleus, plasma membrane 59.92 59.22
CDY52012 Canola cytosol, peroxisome, plasma membrane 59.52 59.06
CDX79993 Canola cytosol, peroxisome, plasma membrane 58.33 58.57
Bra004562.1-P Field mustard cytosol, peroxisome, plasma membrane 58.33 58.57
CDY53913 Canola cytosol, peroxisome, plasma membrane 58.73 58.27
Bra003455.1-P Field mustard cytosol, peroxisome, plasma membrane 58.73 58.27
KRH06560 Soybean endoplasmic reticulum 59.13 58.2
CDY42012 Canola cytosol, peroxisome, plasma membrane 57.54 57.77
AT3G61560.1 Thale cress cytosol, nucleus, plasma membrane 57.54 57.31
Os02t0265900-01 Rice cytosol, peroxisome, plasma membrane 51.59 56.52
KRG99174 Soybean endoplasmic reticulum, plasma membrane 19.44 56.32
CDY57657 Canola cytosol, nucleus, plasma membrane 61.11 56.0
Bra013717.1-P Field mustard nucleus 61.11 55.8
CDY24806 Canola cytosol 60.32 55.47
Bra010539.1-P Field mustard cytosol 59.13 55.39
CDY44123 Canola cytosol, nucleus, plasma membrane 60.32 55.07
CDX90792 Canola cytosol, peroxisome, plasma membrane 58.33 55.06
Bra000739.1-P Field mustard cytosol 58.33 55.06
AT1G64090.2 Thale cress cytosol, endoplasmic reticulum, nucleus 59.13 54.98
GSMUA_Achr10P... Banana golgi, peroxisome, plasma membrane 53.97 54.84
CDY10954 Canola cytosol 58.73 54.81
VIT_16s0050g01790.t01 Wine grape cytosol, nucleus, plasma membrane 55.16 54.72
AT4G11220.1 Thale cress nucleus 58.73 54.61
AT4G23630.2 Thale cress nucleus 59.52 54.55
Bra019285.1-P Field mustard cytosol 57.94 54.48
CDY41666 Canola cytosol 59.13 53.99
Zm00001d016041_P001 Maize extracellular 49.21 53.91
KRH35223 Soybean cytosol, nucleus, plasma membrane 53.17 53.6
GSMUA_Achr6P15870_001 Banana golgi, peroxisome, plasma membrane 52.38 53.23
OQU84758 Sorghum cytosol, peroxisome, plasma membrane 48.41 52.59
CDY13240 Canola cytosol, peroxisome, plasma membrane 33.33 52.17
GSMUA_Achr5P07570_001 Banana golgi, peroxisome, plasma membrane 51.19 52.02
VIT_02s0025g00590.t01 Wine grape mitochondrion 12.3 51.67
EER89811 Sorghum peroxisome 51.98 51.17
TraesCS7A01G341800.1 Wheat cytosol, peroxisome, plasma membrane, plastid 52.78 51.15
TraesCS7B01G241100.1 Wheat cytosol, peroxisome, plasma membrane, plastid 52.78 51.15
KRH48008 Soybean cytosol, peroxisome, plasma membrane 62.7 50.32
Zm00001d037453_P001 Maize cytosol, peroxisome, plasma membrane 51.98 50.19
TraesCS7D01G337800.1 Wheat cytosol, peroxisome, plasma membrane, plastid 51.59 50.0
Os06t0503400-01 Rice plasma membrane 52.38 49.81
CDY48510 Canola cytosol 47.22 48.97
CDY07184 Canola cytosol, peroxisome, plasma membrane 47.22 48.97
Bra037369.1-P Field mustard cytosol 47.22 48.97
AT4G01230.2 Thale cress cytosol 46.43 47.95
GSMUA_Achr10P... Banana cytosol, endoplasmic reticulum, peroxisome 37.3 47.47
HORVU7Hr1G081290.4 Barley plastid 42.06 45.89
CDY05135 Canola mitochondrion 56.35 45.37
HORVU7Hr1G075700.2 Barley mitochondrion 52.38 44.0
GSMUA_Achr6P04560_001 Banana cytosol, peroxisome, plasma membrane 43.25 43.95
GSMUA_Achr3P15760_001 Banana cytosol 25.4 42.67
CDY62522 Canola cytosol 13.1 41.25
GSMUA_Achr9P10200_001 Banana cytosol, peroxisome, plasma membrane 37.7 39.26
KRG91601 Soybean mitochondrion 52.78 39.12
Bra035242.1-P Field mustard cytosol 30.56 38.5
GSMUA_Achr8P31770_001 Banana peroxisome 33.73 38.12
CDX86802 Canola cytosol, nucleus, peroxisome 36.11 37.14
GSMUA_Achr2P07230_001 Banana golgi, plasma membrane, vacuole 30.56 36.67
CDX89122 Canola extracellular, mitochondrion 21.03 34.64
GSMUA_Achr3P09820_001 Banana cytosol, peroxisome, plasma membrane 31.35 34.35
GSMUA_Achr7P05440_001 Banana peroxisome, plasma membrane, vacuole 30.16 34.08
VIT_07s0031g02730.t01 Wine grape golgi, mitochondrion, nucleus, plasma membrane 24.21 33.89
GSMUA_Achr10P... Banana plasma membrane 30.56 33.48
GSMUA_Achr8P02250_001 Banana cytosol, mitochondrion, peroxisome, plasma membrane 31.75 32.39
GSMUA_Achr6P33560_001 Banana plasma membrane 30.95 29.55
GSMUA_Achr4P20190_001 Banana cytosol, plastid 32.14 28.72
GSMUA_AchrUn_... Banana golgi 31.35 22.44
Protein Annotations
EnsemblPlants:GSMUA_Achr10P22000_001EnsemblPlants:GSMUA_Achr10T22000_001EnsemblPlantsGene:GSMUA_Achr10G22000_001GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0016020GO:GO:0016021InterPro:IPR003388
InterPro:Reticulonncoils:CoilPANTHER:PTHR10994PANTHER:PTHR10994:SF70PFAM:PF02453PFscan:PS50845
SEG:segTMHMM:TMhelixUniParc:UPI0002967C54UniProt:M0RKC5MapMan:13.7.2.1:
Description
Reticulon-like protein B5 [Source:GMGC_GENE;Acc:GSMUA_Achr10G22000_001]
Coordinates
chr10:-:27348332..27350163
Molecular Weight (calculated)
27993.1 Da
IEP (calculated)
8.446
GRAVY (calculated)
0.010
Length
252 amino acids
Sequence
(BLAST)
001: MAEHSEESTV TEKIEEEPRK PAGSSSSSSD SESDCEEPVQ SSSVKAKVYR LFGREKPVHQ VLGGGKSADV MLWRDKKISA GALSAATAIW VMFELVGYHL
101: LTFVCHGLIL SLVILFLWSK ACTFINKSPP RIPEVSIPED QAVQVARTLR YEMNRALAVL REVALGRDVK KFLTVIAGLW LLSMVGSSVN FLTLVYILFV
201: TLHTVPVLYE KYEDKVDAAA EKAMAEIKKQ YAVLDDKVLS KIPRGPLKDK KH
Best Arabidopsis Sequence Match ( AT5G41600.1 )
(BLAST)
001: MVEDHKHEES ILEKIVEKIH GHGDSSSLSD SDDDKKSTSS SSSSFKSKIY RLFGREKPVH KVLGGGKPAD IFLWRNKKVS GGVLGAVTAS WVLFELFEYH
101: LLAFLCHFAI FALAALFLWS NACTFIHKST PHIPEVHIPE DPILQLVSGL RIEINRGLTL LRNIASGKDV KKFILVIAGL WVLSIIGSCY NFLTLFYTAT
201: VLLFTIPVLY EKYEDKVDAY GEKAMREIKK QYAVLDEKVL RKVISKIPRG ALNKKKD
Arabidopsis Description
RTNLB4Reticulon-like protein B4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFS0]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.