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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • plasma membrane 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:cytosol
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY10954 Canola cytosol 98.51 97.78
Bra013717.1-P Field mustard nucleus 92.91 90.22
AT4G23630.2 Thale cress nucleus 92.54 90.18
Bra010539.1-P Field mustard cytosol 89.18 88.85
Bra000739.1-P Field mustard cytosol 83.21 83.52
VIT_02s0025g00640.t01 Wine grape cytosol, nucleus, plasma membrane 64.93 69.05
KRH41254 Soybean cytosol, nucleus, plasma membrane 65.3 68.9
KRH59988 Soybean mitochondrion 64.93 68.5
Bra027678.1-P Field mustard cytosol, endoplasmic reticulum, nucleus 63.06 67.33
VIT_15s0046g01760.t01 Wine grape cytosol, peroxisome, plasma membrane 63.43 66.67
Bra027757.1-P Field mustard cytosol, endoplasmic reticulum, peroxisome 61.94 66.4
Zm00001d012776_P001 Maize extracellular 61.57 65.22
Os05t0526400-01 Rice plasma membrane 60.45 64.54
KXG33320 Sorghum cytosol, nucleus, plasma membrane 61.94 64.34
GSMUA_Achr8P27830_001 Banana cytosol, peroxisome, plasma membrane 60.07 64.14
Os01t0226300-01 Rice plasma membrane 42.54 64.04
Zm00001d043551_P003 Maize plasma membrane 61.19 63.81
Bra004562.1-P Field mustard cytosol, peroxisome, plasma membrane 59.7 63.74
TraesCS3D01G279100.1 Wheat cytosol, nucleus, plasma membrane 58.96 63.71
PGSC0003DMT400032086 Potato cytosol, nucleus, plasma membrane 64.18 63.7
Solyc08g081730.2.1 Tomato endoplasmic reticulum, plastid 64.18 63.7
Os01t0736900-01 Rice plasma membrane 60.07 63.64
TraesCS3A01G278800.1 Wheat golgi 58.58 63.31
GSMUA_Achr9P05440_001 Banana nucleus, peroxisome, plasma membrane 58.96 62.95
TraesCS3B01G313000.1 Wheat cytosol, nucleus, plasma membrane 59.33 62.85
EES19841 Sorghum cytosol, nucleus, plasma membrane 59.7 62.75
TraesCS1D01G349700.1 Wheat cytosol, nucleus, plasma membrane 57.46 62.1
HORVU3Hr1G069970.2 Barley cytosol, nucleus, plasma membrane 58.96 61.96
TraesCS1B01G360800.1 Wheat cytosol, nucleus, plasma membrane 57.46 61.85
GSMUA_AchrUn_... Banana cytosol, nucleus, plasma membrane 59.33 61.63
Zm00001d038768_P001 Maize extracellular, mitochondrion 58.21 61.42
CDY62522 Canola cytosol 18.28 61.25
Bra003455.1-P Field mustard cytosol, peroxisome, plasma membrane 57.09 60.24
GSMUA_Achr6P31860_001 Banana cytosol, nucleus, plasma membrane 56.34 59.92
GSMUA_Achr3P31920_001 Banana cytosol 48.13 58.9
GSMUA_Achr10P... Banana cytosol, endoplasmic reticulum, plasma membrane 54.48 57.94
GSMUA_Achr4P08400_001 Banana cytosol 52.99 56.13
Zm00001d008982_P001 Maize cytosol, nucleus, plasma membrane 56.72 54.48
GSMUA_Achr5P06850_001 Banana cytosol, nucleus, plasma membrane 50.75 54.4
KXG31516 Sorghum cytosol, nucleus, plasma membrane 57.09 53.87
TraesCS3D01G159100.1 Wheat cytosol, nucleus, plasma membrane 57.46 53.85
TraesCS3B01G178100.1 Wheat cytosol, nucleus, plasma membrane 57.09 53.5
Zm00001d020229_P001 Maize plasma membrane 29.1 51.32
Os02t0265900-01 Rice cytosol, peroxisome, plasma membrane 44.03 51.3
TraesCS1A01G346800.3 Wheat plasma membrane 47.76 50.79
Zm00001d016041_P001 Maize extracellular 43.28 50.43
OQU84758 Sorghum cytosol, peroxisome, plasma membrane 42.91 49.57
HORVU1Hr1G082010.3 Barley cytosol, nucleus, plasma membrane, plastid 48.13 49.43
Zm00001d039316_P001 Maize cytosol, nucleus, plasma membrane 55.97 49.02
TraesCS7A01G341800.1 Wheat cytosol, peroxisome, plasma membrane, plastid 47.39 48.85
TraesCS7B01G241100.1 Wheat cytosol, peroxisome, plasma membrane, plastid 47.39 48.85
TraesCS7D01G337800.1 Wheat cytosol, peroxisome, plasma membrane, plastid 47.01 48.46
EER89811 Sorghum peroxisome 46.27 48.44
Zm00001d020729_P001 Maize plasma membrane 17.16 48.42
HORVU3Hr1G030760.2 Barley mitochondrion 56.72 48.41
TraesCS3A01G151200.1 Wheat cytosol, peroxisome, plasma membrane 57.09 47.52
Zm00001d037453_P001 Maize cytosol, peroxisome, plasma membrane 45.9 47.13
Bra037369.1-P Field mustard cytosol 42.54 46.91
Os06t0503400-01 Rice plasma membrane 45.9 46.42
HORVU7Hr1G081290.4 Barley plastid 38.81 45.02
Bra035242.1-P Field mustard cytosol 33.58 45.0
HORVU7Hr1G075700.2 Barley mitochondrion 47.01 42.0
GSMUA_Achr3P15760_001 Banana cytosol 23.13 41.33
Bra029827.1-P Field mustard plasma membrane 33.21 37.24
Bra037594.1-P Field mustard plasma membrane 29.48 35.27
VIT_07s0031g02730.t01 Wine grape golgi, mitochondrion, nucleus, plasma membrane 23.13 34.44
Bra001748.1-P Field mustard plastid 24.63 33.67
Bra004291.1-P Field mustard plasma membrane 26.12 33.18
Bra003171.1-P Field mustard plasma membrane 25.0 33.0
Bra040612.1-P Field mustard plasma membrane 21.64 31.69
Bra022426.1-P Field mustard cytosol, plasma membrane, plastid 27.61 30.33
Bra007047.1-P Field mustard golgi, plasma membrane, vacuole 23.13 30.24
Bra029878.1-P Field mustard cytosol, peroxisome, plasma membrane 26.87 30.13
Bra034153.1-P Field mustard plasma membrane 24.25 29.15
Bra039207.1-P Field mustard plasma membrane 18.28 23.56
Bra033951.1-P Field mustard plasma membrane 25.75 22.85
Protein Annotations
EnsemblPlants:Bra019285.1EnsemblPlants:Bra019285.1-PEnsemblPlantsGene:Bra019285GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0016020GO:GO:0016021InterPro:IPR003388
InterPro:ReticulonPANTHER:PTHR10994PANTHER:PTHR10994:SF70PFAM:PF02453PFscan:PS50845SEG:seg
TMHMM:TMhelixUniParc:UPI0002540EFEUniProt:M4DRZ2MapMan:13.7.2.1::
Description
AT4G23630 (E=2e-128) BTI1 | BTI1 (VIRB2-INTERACTING PROTEIN 1)
Coordinates
chrA03:+:25240954..25242128
Molecular Weight (calculated)
29938.7 Da
IEP (calculated)
8.870
GRAVY (calculated)
-0.091
Length
268 amino acids
Sequence
(BLAST)
001: MTDEHKHDES VTASEPAVEV VERESLMDKI SEKLHHGGDS SSSDEDEKKK KSSESPSSMK SKVYRLFGRE KPVHKVLGGG KPADIFMWKN KKMSGGVLGG
101: ATAAWVLFEL MEYHLLTLLC HVMIVVLAVL FLWSNATMFI NKSPPKIPEV HIPEEPILQL ASGLRVEINR GFSSLREIAS GRDLKKFLAA IAGLWFVSIL
201: GGWFNFLTLA YIALVLLFTV PLAYDKYEDK VDPLGEKAMI EIKKQYAVLD EKVLSKIPLG PLKNKKKD
Best Arabidopsis Sequence Match ( AT4G23630.2 )
(BLAST)
001: MAEEHKHDES VIAPEPAVEV VERESLMDKI SEKIHHGGDS SSSSSSSDDE DEKKKTKKPS SPSSSMKSKV YRLFGREQPV HKVLGGGKPA DIFMWKNKKM
101: SGGVLGGATA AWVVFELMEY HLLTLLCHVM IVVLAVLFLW SNATMFINKS PPKIPEVHIP EEPILQLASG LRIEINRGFS SLREIASGRD LKKFLIAIAG
201: LWVLSILGGC FNFLTLAYIA LVLLFTVPLA YDKYEDKVDP LGEKAMIELK KQYAVLDEKV LSKIPLGPLK NKKKD
Arabidopsis Description
RTNLB1Reticulon-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178V247]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.