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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • peroxisome 1
  • extracellular 2
  • plastid 1
  • plasma membrane 3
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:extracellular, nucleus, peroxisome, plasma membrane, plastid
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRG91601 Soybean mitochondrion 94.4 69.41
Os01t0226300-01 Rice plasma membrane 42.4 59.55
PGSC0003DMT400074360 Potato cytosol, nucleus, plasma membrane 59.6 58.89
KRH59988 Soybean mitochondrion 59.6 58.66
Zm00001d012776_P001 Maize extracellular 58.8 58.1
Solyc06g036430.2.1 Tomato cytosol, nucleus, plasma membrane 58.4 57.71
Zm00001d043551_P003 Maize plasma membrane 59.2 57.59
KRH41254 Soybean cytosol, nucleus, plasma membrane 58.4 57.48
KRG99174 Soybean endoplasmic reticulum, plasma membrane 20.0 57.47
Solyc03g007740.2.1 Tomato nucleus 58.4 57.25
Os01t0736900-01 Rice plasma membrane 57.6 56.92
KXG33320 Sorghum cytosol, nucleus, plasma membrane 58.4 56.59
PGSC0003DMT400051387 Potato cytosol, nucleus, plasma membrane 57.6 56.47
KRH40357 Soybean endoplasmic reticulum 58.0 56.42
KRH06560 Soybean endoplasmic reticulum 57.2 55.86
TraesCS3D01G279100.1 Wheat cytosol, nucleus, plasma membrane 55.2 55.65
HORVU3Hr1G069970.2 Barley cytosol, nucleus, plasma membrane 56.4 55.29
KRH00872 Soybean endoplasmic reticulum 57.2 55.21
TraesCS3A01G278800.1 Wheat golgi 54.4 54.84
GSMUA_Achr6P31860_001 Banana cytosol, nucleus, plasma membrane 55.2 54.76
Os05t0526400-01 Rice plasma membrane 54.8 54.58
TraesCS3B01G313000.1 Wheat cytosol, nucleus, plasma membrane 55.2 54.55
EES19841 Sorghum cytosol, nucleus, plasma membrane 55.6 54.51
GSMUA_AchrUn_... Banana cytosol, nucleus, plasma membrane 56.0 54.26
GSMUA_Achr9P05440_001 Banana nucleus, peroxisome, plasma membrane 54.4 54.18
GSMUA_Achr8P27830_001 Banana cytosol, peroxisome, plasma membrane 54.0 53.78
Zm00001d038768_P001 Maize extracellular, mitochondrion 54.4 53.54
TraesCS1D01G349700.1 Wheat cytosol, nucleus, plasma membrane 52.8 53.23
GSMUA_Achr10P... Banana cytosol, endoplasmic reticulum, plasma membrane 53.6 53.17
TraesCS1B01G360800.1 Wheat cytosol, nucleus, plasma membrane 52.8 53.01
GSMUA_Achr3P31920_001 Banana cytosol 45.6 52.05
GSMUA_Achr4P08400_001 Banana cytosol 52.0 51.38
Zm00001d008982_P001 Maize cytosol, nucleus, plasma membrane 56.4 50.54
KXG31516 Sorghum cytosol, nucleus, plasma membrane 56.0 49.3
GSMUA_Achr5P06850_001 Banana cytosol, nucleus, plasma membrane 48.8 48.8
Zm00001d020229_P001 Maize plasma membrane 29.6 48.68
VIT_16s0050g01790.t01 Wine grape cytosol, nucleus, plasma membrane 48.4 47.64
TraesCS3B01G178100.1 Wheat cytosol, nucleus, plasma membrane 54.4 47.55
TraesCS3D01G159100.1 Wheat cytosol, nucleus, plasma membrane 54.4 47.55
KRH48008 Soybean cytosol, peroxisome, plasma membrane 58.4 46.5
Zm00001d039316_P001 Maize cytosol, nucleus, plasma membrane 55.2 45.1
Os02t0265900-01 Rice cytosol, peroxisome, plasma membrane 41.2 44.78
Zm00001d020729_P001 Maize plasma membrane 16.8 44.21
HORVU3Hr1G030760.2 Barley mitochondrion 54.8 43.63
Zm00001d016041_P001 Maize extracellular 40.0 43.48
EER89811 Sorghum peroxisome 44.4 43.36
OQU84758 Sorghum cytosol, peroxisome, plasma membrane 40.0 43.1
TraesCS1A01G346800.3 Wheat plasma membrane 42.8 42.46
TraesCS3A01G151200.1 Wheat cytosol, peroxisome, plasma membrane 54.4 42.24
Zm00001d037453_P001 Maize cytosol, peroxisome, plasma membrane 44.0 42.15
Os06t0503400-01 Rice plasma membrane 43.2 40.75
TraesCS7D01G337800.1 Wheat cytosol, peroxisome, plasma membrane, plastid 42.0 40.38
TraesCS7B01G241100.1 Wheat cytosol, peroxisome, plasma membrane, plastid 42.0 40.38
TraesCS7A01G341800.1 Wheat cytosol, peroxisome, plasma membrane, plastid 42.0 40.38
HORVU1Hr1G082010.3 Barley cytosol, nucleus, plasma membrane, plastid 41.6 39.85
KRG91024 Soybean plasma membrane 31.2 38.24
KRH45979 Soybean cytosol, nucleus, plasma membrane 36.8 37.86
HORVU7Hr1G081290.4 Barley plastid 34.4 37.23
KRH48561 Soybean plasma membrane 32.8 36.94
KRH35738 Soybean endoplasmic reticulum 30.0 36.76
KRH39144 Soybean plasma membrane 32.0 36.04
KRH14529 Soybean cytosol, peroxisome, plasma membrane 34.8 35.51
HORVU7Hr1G075700.2 Barley mitochondrion 42.0 35.0
KRH73588 Soybean plasma membrane 34.0 34.69
KRH30696 Soybean plasma membrane 33.6 34.15
KRG99024 Soybean plasma membrane 36.0 34.09
KRH35899 Soybean plasma membrane 28.8 33.96
GSMUA_Achr3P15760_001 Banana cytosol 20.0 33.33
KRH66004 Soybean endoplasmic reticulum, golgi, plasma membrane 24.4 29.19
KRH75801 Soybean plasma membrane 24.4 29.19
KRH18469 Soybean plasma membrane 22.8 28.79
KRG93546 Soybean plasma membrane 22.0 27.64
KRH28521 Soybean endoplasmic reticulum 19.2 22.64
KRH76938 Soybean endoplasmic reticulum, plasma membrane 14.4 22.36
Protein Annotations
EntrezGene:100790190MapMan:13.7.2.1UniProt:A0A0R4J4D1EMBL:ACUP02006659EnsemblPlantsGene:GLYMA_10G229600GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0016020
GO:GO:0016021InterPro:IPR003388EnsemblPlants:KRH35223ProteinID:KRH35223ProteinID:KRH35223.1PFAM:PF02453
PFscan:PS50845PANTHER:PTHR10994PANTHER:PTHR10994:SF70InterPro:ReticulonTMHMM:TMhelixUniParc:UPI00018C6FE1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr10:-:45968793..45971854
Molecular Weight (calculated)
28316.1 Da
IEP (calculated)
6.678
GRAVY (calculated)
0.120
Length
250 amino acids
Sequence
(BLAST)
001: MASGDTDSFS DKVEEKFHDH NSDSDSYSDS DDDHNNRPPP KTTVSNNVYR LFGRDQPVHK VLGGGKPADI LLWRNRRSTG VVLGAGTAFW IFFELMQYHL
101: ITFICHLLIV SLAALFLWSN ASVFIHKSSL HIPHVALPEE CVHQVASALT IEINRAFVIV REIGTGRDLK KFLSVIAVLW VISVIGSWFN FMTLFYLFFV
201: SLFTLPLLYE KYEDQVDALG EKAMIEIKKQ YAVFDAKVLS QIPIAGFKKD
Best Arabidopsis Sequence Match ( AT1G64090.1 )
(BLAST)
001: MAEEHKHEES IMEKISEKIH GHDDSSSSSS DSDDDKNSAS LKTKIYRLFG REQPLHKLFG GGKPADIFLW RNKKVSGGVL GAATVSWILF ELLEYNLLTL
101: FGHISILALA VLFLWSSAST FIHKSPLHIP EVHIPEDVVL QLASGLRIEI NRGFTVLRDI ASGRDLKKFL LVIAGLWVLS KVGSSCNFLT LIYIATVLLF
201: TIPVLYEKYE DKVDDFGEKA MREIKKQYVE FDVKVLSKVM SKIPKGAFAF IKKKD
Arabidopsis Description
RTNLB3Reticulon-like protein [Source:UniProtKB/TrEMBL;Acc:F4I596]
SUBAcon: [endoplasmic reticulum,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.