Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH18469 | Soybean | plasma membrane | 93.97 | 94.44 |
| Solyc06g049060.2.1 | Tomato | mitochondrion, plasma membrane | 67.34 | 70.53 |
| PGSC0003DMT400042905 | Potato | cytosol, peroxisome, plasma membrane | 69.35 | 57.98 |
| GSMUA_Achr3P09820_001 | Banana | cytosol, peroxisome, plasma membrane | 61.81 | 53.48 |
| Bra034153.1-P | Field mustard | plasma membrane | 58.79 | 52.47 |
| CDY36282 | Canola | plasma membrane | 58.79 | 52.47 |
| EER92307 | Sorghum | peroxisome | 59.8 | 52.19 |
| Os03t0336600-02 | Rice | plasma membrane | 59.3 | 51.08 |
| Zm00001d047517_P001 | Maize | peroxisome | 58.29 | 50.88 |
| Bra029878.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 59.3 | 49.37 |
| TraesCS4D01G171300.2 | Wheat | peroxisome | 56.28 | 49.34 |
| TraesCS4A01G135900.1 | Wheat | peroxisome | 56.28 | 49.34 |
| CDY08567 | Canola | cytosol | 59.3 | 48.96 |
| CDY00975 | Canola | cytosol, endoplasmic reticulum, peroxisome | 58.79 | 48.95 |
| TraesCS4B01G169100.2 | Wheat | cytosol, peroxisome, vacuole | 55.78 | 48.9 |
| AT3G10915.7 | Thale cress | plasma membrane | 59.8 | 47.41 |
| HORVU4Hr1G050020.1 | Barley | plastid | 55.78 | 42.86 |
| KRG91024 | Soybean | plasma membrane | 39.2 | 38.24 |
| KRH35738 | Soybean | endoplasmic reticulum | 38.69 | 37.75 |
| KRH66004 | Soybean | endoplasmic reticulum, golgi, plasma membrane | 38.19 | 36.36 |
| KRH75801 | Soybean | plasma membrane | 37.19 | 35.41 |
| KRH76938 | Soybean | endoplasmic reticulum, plasma membrane | 23.62 | 29.19 |
| KRH45979 | Soybean | cytosol, nucleus, plasma membrane | 35.18 | 28.81 |
| KRH28521 | Soybean | endoplasmic reticulum | 30.65 | 28.77 |
| VIT_13s0067g02960.t01 | Wine grape | endoplasmic reticulum, peroxisome, plasma membrane | 46.73 | 28.44 |
| KRH39144 | Soybean | plasma membrane | 31.16 | 27.93 |
| KRG99174 | Soybean | endoplasmic reticulum, plasma membrane | 12.06 | 27.59 |
| KRH48561 | Soybean | plasma membrane | 30.65 | 27.48 |
| KRH35899 | Soybean | plasma membrane | 29.15 | 27.36 |
| KRH41254 | Soybean | cytosol, nucleus, plasma membrane | 34.17 | 26.77 |
| KRH59988 | Soybean | mitochondrion | 33.67 | 26.38 |
| KRG99024 | Soybean | plasma membrane | 34.67 | 26.14 |
| KRH73588 | Soybean | plasma membrane | 32.16 | 26.12 |
| KRH14529 | Soybean | cytosol, peroxisome, plasma membrane | 32.16 | 26.12 |
| KRH40357 | Soybean | endoplasmic reticulum | 31.66 | 24.51 |
| KRH00872 | Soybean | endoplasmic reticulum | 31.16 | 23.94 |
| KRH06560 | Soybean | endoplasmic reticulum | 29.65 | 23.05 |
| KRH35223 | Soybean | cytosol, nucleus, plasma membrane | 27.64 | 22.0 |
| KRH48008 | Soybean | cytosol, peroxisome, plasma membrane | 30.65 | 19.43 |
| KRH30696 | Soybean | plasma membrane | 21.11 | 17.07 |
| KRG91601 | Soybean | mitochondrion | 27.64 | 16.18 |
Protein Annotations
| EntrezGene:100776896 | MapMan:13.7.2.1 | UniProt:A0A0R0ETF3 | EMBL:ACUP02011589 | EnsemblPlantsGene:GLYMA_19G023300 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:IPR003388 | EnsemblPlants:KRG93546 | ProteinID:KRG93546 | ProteinID:KRG93546.1 | PFAM:PF02453 |
| PFscan:PS50845 | PANTHER:PTHR10994 | PANTHER:PTHR10994:SF67 | InterPro:Reticulon | TMHMM:TMhelix | UniParc:UPI0003DED732 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr19:-:2683505..2685738
Molecular Weight (calculated)
22654.1 Da
IEP (calculated)
8.622
GRAVY (calculated)
0.582
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MSESEAQLPT AFVADVLLWK RWHVSLGIIV VATVAWVLFE WTSLPFLTIC SDVLLILIVL LFLHANYAAL RNNRQPPTLP ELVVSEEMVN NVAASFRVKI
101: NNMLLIAHDI TIGKDFRIFF KVVICLWLLS VIGSAFSFFT LAYIGTLLMI TIPALYSKYG GYVDKCCGVI HRQFSRHYRI VDESVFNRLP RNISKDKES
101: NNMLLIAHDI TIGKDFRIFF KVVICLWLLS VIGSAFSFFT LAYIGTLLMI TIPALYSKYG GYVDKCCGVI HRQFSRHYRI VDESVFNRLP RNISKDKES
001: MDSLSDIDAA DLLLWRRRHL SLGVIIISTV AWLIFEFSGL PFLSVSSDVL LIVIMISFVH ARVSAFRNRQ LHSLPELVLS EEMVNSAAAS FRIKLNHLLV
101: MAHDVTVGND FRLFFKVVIC LWLLSAIGSY ISLCTLLYIG TILSVTIPAL YSKYQSKVDK CCGTIHRRLS HHYKIVDENV ISRLSWSLSK DKDS
101: MAHDVTVGND FRLFFKVVIC LWLLSAIGSY ISLCTLLYIG TILSVTIPAL YSKYQSKVDK CCGTIHRRLS HHYKIVDENV ISRLSWSLSK DKDS
Arabidopsis Description
Reticulon-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LP93]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.