Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- golgi 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P07050_001 | Banana | golgi, plasma membrane, vacuole | 91.26 | 91.26 |
| GSMUA_Achr8P29900_001 | Banana | golgi, plasma membrane, vacuole | 91.26 | 91.26 |
| KRH33787 | Soybean | golgi, plasma membrane, vacuole | 89.07 | 89.07 |
| KRG90495 | Soybean | golgi, plasma membrane, vacuole | 88.52 | 88.52 |
| VIT_14s0060g00830.t01 | Wine grape | golgi, plasma membrane, vacuole | 85.25 | 85.25 |
| Solyc06g073270.2.1 | Tomato | golgi, plasma membrane, vacuole | 84.7 | 84.7 |
| CDY32169 | Canola | golgi, plasma membrane, vacuole | 82.51 | 83.89 |
| Bra030769.1-P | Field mustard | golgi, plasma membrane, vacuole | 83.61 | 83.61 |
| PGSC0003DMT400069186 | Potato | golgi, plasma membrane, vacuole | 83.61 | 83.61 |
| CDY31098 | Canola | golgi, plasma membrane, vacuole | 81.97 | 83.33 |
| Bra018566.1-P | Field mustard | golgi, plasma membrane, vacuole | 83.06 | 83.06 |
| VIT_07s0005g01960.t01 | Wine grape | golgi, plasma membrane, vacuole | 74.86 | 83.03 |
| CDX94985 | Canola | golgi, plasma membrane, vacuole | 81.42 | 82.78 |
| CDY64777 | Canola | golgi, plasma membrane, vacuole | 81.42 | 82.78 |
| KRG96705 | Soybean | golgi, plasma membrane, vacuole | 82.51 | 82.51 |
| CDX93510 | Canola | golgi, plasma membrane, vacuole | 80.87 | 82.22 |
| AT1G09330.1 | Thale cress | golgi, plasma membrane, vacuole | 82.51 | 81.18 |
| KRH68422 | Soybean | endoplasmic reticulum, extracellular, vacuole | 50.27 | 80.0 |
| Zm00001d010824_P001 | Maize | plasma membrane | 78.69 | 78.69 |
| EES17764 | Sorghum | golgi, plasma membrane, vacuole | 78.14 | 78.14 |
| TraesCS1A01G106000.1 | Wheat | golgi | 78.69 | 77.42 |
| TraesCS1B01G128400.1 | Wheat | golgi, plasma membrane, vacuole | 78.69 | 77.42 |
| TraesCS1D01G109000.1 | Wheat | golgi, plasma membrane, vacuole | 78.69 | 77.42 |
| Os01t0331900-01 | Rice | golgi, plasma membrane, vacuole | 75.96 | 75.96 |
| EES00703 | Sorghum | golgi, plasma membrane, vacuole | 75.96 | 75.96 |
| Zm00001d040734_P001 | Maize | golgi, plasma membrane, vacuole | 75.41 | 75.41 |
| Os05t0159100-01 | Rice | plasma membrane | 75.96 | 74.33 |
| HORVU1Hr1G023500.9 | Barley | golgi, mitochondrion, plasma membrane | 77.05 | 70.85 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P24970_001 | EnsemblPlants:GSMUA_Achr1T24970_001 | EnsemblPlantsGene:GSMUA_Achr1G24970_001 | GO:GO:0000139 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0016020 | GO:GO:0016021 | InterPro:TVP23-like |
| PANTHER:PTHR13019 | PANTHER:PTHR13019:SF14 | PFAM:PF05832 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000294830A |
| UniProt:M0S2V4 | MapMan:22.5.6.1 | : | : | : | : |
Description
Uncharacterized FAM18-like protein At1g09330 [Source:GMGC_GENE;Acc:GSMUA_Achr1G24970_001]
Coordinates
chr1:-:19360952..19364771
Molecular Weight (calculated)
20915.6 Da
IEP (calculated)
8.314
GRAVY (calculated)
0.540
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPVQPTGEN YANPKTCLFH VLFKAAALAF YILSAIFIDS FVIIFVVTVF LAALDFWVVK NVSGRILVGL RWWNEIDEQG ESIWKFECLD QESLARMNKK
101: DSWLFWWTLY LTAVAWIFLG IFSLIRFQAD YLLVVGVCLT LSIANIVGFT KCRKDAKKQI QQFATQTIAS RFTSSLQSAF SVV
101: DSWLFWWTLY LTAVAWIFLG IFSLIRFQAD YLLVVGVCLT LSIANIVGFT KCRKDAKKQI QQFATQTIAS RFTSSLQSAF SVV
001: MDPNNQIQAP VENYANPRTC LFHVLFKGAA LAFYILSALF FNSFVIIFVV TVLLAALDFW VVKNVSGRIL VGLRWWNEIN DLGESVWKFE SLDQESLARM
101: NKKDSWLFWW TLYLAAAAWF ILGVFSLIRF QADYLLVVGV CLSLNVANII GFTKCKKDAK KQFQQFASQT IASRFQSTVQ SAFTLV
101: NKKDSWLFWW TLYLAAAAWF ILGVFSLIRF QADYLLVVGV CLSLNVANII GFTKCKKDAK KQFQQFASQT IASRFQSTVQ SAFTLV
Arabidopsis Description
ECHGolgi apparatus membrane protein-like protein ECHIDNA [Source:UniProtKB/Swiss-Prot;Acc:Q8LEK2]
SUBAcon: [plasma membrane,golgi,vacuole]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.