Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 5
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G09330.1 | KRH22653 | AT5G22290.1 | 21798944 |
| AT1G09330.1 | KRH26664 | AT5G22290.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH33787 | Soybean | golgi, plasma membrane, vacuole | 86.09 | 54.1 |
| KRG90495 | Soybean | golgi, plasma membrane, vacuole | 86.09 | 54.1 |
| KRG96705 | Soybean | golgi, plasma membrane, vacuole | 85.22 | 53.55 |
| GSMUA_Achr2P07050_001 | Banana | golgi, plasma membrane, vacuole | 80.0 | 50.27 |
| GSMUA_Achr1P24970_001 | Banana | golgi, plasma membrane, vacuole | 80.0 | 50.27 |
| VIT_14s0060g00830.t01 | Wine grape | golgi, plasma membrane, vacuole | 79.13 | 49.73 |
| Solyc06g073270.2.1 | Tomato | golgi, plasma membrane, vacuole | 77.39 | 48.63 |
| GSMUA_Achr8P29900_001 | Banana | golgi, plasma membrane, vacuole | 77.39 | 48.63 |
| PGSC0003DMT400069186 | Potato | golgi, plasma membrane, vacuole | 76.52 | 48.09 |
| CDY64777 | Canola | golgi, plasma membrane, vacuole | 74.78 | 47.78 |
| CDY32169 | Canola | golgi, plasma membrane, vacuole | 74.78 | 47.78 |
| CDY31098 | Canola | golgi, plasma membrane, vacuole | 74.78 | 47.78 |
| CDX94985 | Canola | golgi, plasma membrane, vacuole | 74.78 | 47.78 |
| CDX93510 | Canola | golgi, plasma membrane, vacuole | 73.91 | 47.22 |
| Bra030769.1-P | Field mustard | golgi, plasma membrane, vacuole | 74.78 | 46.99 |
| Bra018566.1-P | Field mustard | golgi, plasma membrane, vacuole | 74.78 | 46.99 |
| AT1G09330.1 | Thale cress | golgi, plasma membrane, vacuole | 74.78 | 46.24 |
| EES17764 | Sorghum | golgi, plasma membrane, vacuole | 72.17 | 45.36 |
| Zm00001d010824_P001 | Maize | plasma membrane | 72.17 | 45.36 |
| Os01t0331900-01 | Rice | golgi, plasma membrane, vacuole | 72.17 | 45.36 |
| Zm00001d040734_P001 | Maize | golgi, plasma membrane, vacuole | 71.3 | 44.81 |
| EES00703 | Sorghum | golgi, plasma membrane, vacuole | 71.3 | 44.81 |
| TraesCS1A01G106000.1 | Wheat | golgi | 69.57 | 43.01 |
| TraesCS1B01G128400.1 | Wheat | golgi, plasma membrane, vacuole | 69.57 | 43.01 |
| TraesCS1D01G109000.1 | Wheat | golgi, plasma membrane, vacuole | 69.57 | 43.01 |
| Os05t0159100-01 | Rice | plasma membrane | 67.83 | 41.71 |
| HORVU1Hr1G023500.9 | Barley | golgi, mitochondrion, plasma membrane | 69.57 | 40.2 |
Protein Annotations
| MapMan:35.1 | EMBL:ACUP02002115 | EnsemblPlantsGene:GLYMA_03G230100 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005794 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009306 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016192 | GO:GO:0030173 | UniProt:K7KGJ7 | EnsemblPlants:KRH68422 |
| ProteinID:KRH68422 | ProteinID:KRH68422.1 | PANTHER:PTHR13019 | PANTHER:PTHR13019:SF14 | TMHMM:TMhelix | InterPro:TVP23-like |
| UniParc:UPI000295F388 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:+:43193547..43197236
Molecular Weight (calculated)
12966.0 Da
IEP (calculated)
7.808
GRAVY (calculated)
0.720
Length
115 amino acids
Sequence
(BLAST)
(BLAST)
001: MDCKKAAALS FYILSALFID NFVIIFVMTV LLAALDFCVW KFECLDQQSF ARMNKKDSWL FWLQADYLLV VGVCLTLSIA NIVGFTKCQI DTKKPIQQFA
101: SQTIASQVSS TFSVV
101: SQTIASQVSS TFSVV
001: MDPNNQIQAP VENYANPRTC LFHVLFKGAA LAFYILSALF FNSFVIIFVV TVLLAALDFW VVKNVSGRIL VGLRWWNEIN DLGESVWKFE SLDQESLARM
101: NKKDSWLFWW TLYLAAAAWF ILGVFSLIRF QADYLLVVGV CLSLNVANII GFTKCKKDAK KQFQQFASQT IASRFQSTVQ SAFTLV
101: NKKDSWLFWW TLYLAAAAWF ILGVFSLIRF QADYLLVVGV CLSLNVANII GFTKCKKDAK KQFQQFASQT IASRFQSTVQ SAFTLV
Arabidopsis Description
ECHGolgi apparatus membrane protein-like protein ECHIDNA [Source:UniProtKB/Swiss-Prot;Acc:Q8LEK2]
SUBAcon: [plasma membrane,golgi,vacuole]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.