Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- golgi 3
- extracellular 2
- plasma membrane 3
- endoplasmic reticulum 2
- vacuole 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27341663
|
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES17764 | Sorghum | golgi, plasma membrane, vacuole | 98.91 | 98.91 |
| TraesCS1D01G109000.1 | Wheat | golgi, plasma membrane, vacuole | 90.16 | 88.71 |
| TraesCS1B01G128400.1 | Wheat | golgi, plasma membrane, vacuole | 90.16 | 88.71 |
| TraesCS1A01G106000.1 | Wheat | golgi | 90.16 | 88.71 |
| Os05t0159100-01 | Rice | plasma membrane | 88.52 | 86.63 |
| Zm00001d040734_P001 | Maize | golgi, plasma membrane, vacuole | 84.15 | 84.15 |
| HORVU1Hr1G023500.9 | Barley | golgi, mitochondrion, plasma membrane | 89.62 | 82.41 |
| KRG90495 | Soybean | golgi, plasma membrane, vacuole | 79.78 | 79.78 |
| GSMUA_Achr8P29900_001 | Banana | golgi, plasma membrane, vacuole | 79.23 | 79.23 |
| KRH33787 | Soybean | golgi, plasma membrane, vacuole | 79.23 | 79.23 |
| GSMUA_Achr1P24970_001 | Banana | golgi, plasma membrane, vacuole | 78.69 | 78.69 |
| GSMUA_Achr2P07050_001 | Banana | golgi, plasma membrane, vacuole | 78.14 | 78.14 |
| CDY31098 | Canola | golgi, plasma membrane, vacuole | 75.41 | 76.67 |
| CDY32169 | Canola | golgi, plasma membrane, vacuole | 75.41 | 76.67 |
| KRG96705 | Soybean | golgi, plasma membrane, vacuole | 75.96 | 75.96 |
| PGSC0003DMT400069186 | Potato | golgi, plasma membrane, vacuole | 75.96 | 75.96 |
| Solyc06g073270.2.1 | Tomato | golgi, plasma membrane, vacuole | 75.96 | 75.96 |
| VIT_14s0060g00830.t01 | Wine grape | golgi, plasma membrane, vacuole | 75.96 | 75.96 |
| CDY64777 | Canola | golgi, plasma membrane, vacuole | 74.32 | 75.56 |
| CDX94985 | Canola | golgi, plasma membrane, vacuole | 74.32 | 75.56 |
| Bra030769.1-P | Field mustard | golgi, plasma membrane, vacuole | 75.41 | 75.41 |
| VIT_07s0005g01960.t01 | Wine grape | golgi, plasma membrane, vacuole | 67.76 | 75.15 |
| CDX93510 | Canola | golgi, plasma membrane, vacuole | 73.77 | 75.0 |
| Bra018566.1-P | Field mustard | golgi, plasma membrane, vacuole | 74.32 | 74.32 |
| AT1G09330.1 | Thale cress | golgi, plasma membrane, vacuole | 74.32 | 73.12 |
| KRH68422 | Soybean | endoplasmic reticulum, extracellular, vacuole | 45.36 | 72.17 |
Protein Annotations
| EntrezGene:100381872 | MapMan:22.5.6.1 | ProteinID:AQK95032.1 | EMBL:BT062482 | UniProt:C0P2G3 | GO:GO:0000139 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0016020 |
| GO:GO:0016021 | PFAM:PF05832 | PANTHER:PTHR13019 | PANTHER:PTHR13019:SF14 | TMHMM:TMhelix | InterPro:TVP23-like |
| UniParc:UPI000194857A | EnsemblPlantsGene:Zm00001d010824 | EnsemblPlants:Zm00001d010824_P001 | EnsemblPlants:Zm00001d010824_T001 | : | : |
Description
Golgi apparatus membrane protein-like protein ECHIDNA
Coordinates
chr8:+:128893375..128896851
Molecular Weight (calculated)
20679.3 Da
IEP (calculated)
8.314
GRAVY (calculated)
0.613
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQRQVVSEN YANPITCFFH VLFKAGALAF YILFSLFVKS FVIIFVITVL LAALDFWVVK NVSGRILVGL RWWNEIDDDG NSVWKFECLD GESLARMNKK
101: DSWLFWWTLY LTAAAWIVLG IFSLIRLEAD YLLVVGVCLS LSIANIVGFT KCNKDAKKNI QTFAQNALAS RVTSSLQSAF GVI
101: DSWLFWWTLY LTAAAWIVLG IFSLIRLEAD YLLVVGVCLS LSIANIVGFT KCNKDAKKNI QTFAQNALAS RVTSSLQSAF GVI
001: MDPNNQIQAP VENYANPRTC LFHVLFKGAA LAFYILSALF FNSFVIIFVV TVLLAALDFW VVKNVSGRIL VGLRWWNEIN DLGESVWKFE SLDQESLARM
101: NKKDSWLFWW TLYLAAAAWF ILGVFSLIRF QADYLLVVGV CLSLNVANII GFTKCKKDAK KQFQQFASQT IASRFQSTVQ SAFTLV
101: NKKDSWLFWW TLYLAAAAWF ILGVFSLIRF QADYLLVVGV CLSLNVANII GFTKCKKDAK KQFQQFASQT IASRFQSTVQ SAFTLV
Arabidopsis Description
ECHGolgi apparatus membrane protein-like protein ECHIDNA [Source:UniProtKB/Swiss-Prot;Acc:Q8LEK2]
SUBAcon: [golgi,plasma membrane,vacuole]
SUBAcon: [golgi,plasma membrane,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.