Subcellular Localization
min:
: max
Winner_takes_all: golgi, plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- plastid 2
- golgi 2
- extracellular 1
- plasma membrane 2
- endoplasmic reticulum 1
- vacuole 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY64777 | Canola | golgi, plasma membrane, vacuole | 95.16 | 98.33 |
| Bra030769.1-P | Field mustard | golgi, plasma membrane, vacuole | 96.24 | 97.81 |
| CDX94985 | Canola | golgi, plasma membrane, vacuole | 94.62 | 97.78 |
| Bra018566.1-P | Field mustard | golgi, plasma membrane, vacuole | 95.7 | 97.27 |
| CDY31098 | Canola | golgi, plasma membrane, vacuole | 94.09 | 97.22 |
| CDX93510 | Canola | golgi, plasma membrane, vacuole | 93.55 | 96.67 |
| CDY32169 | Canola | golgi, plasma membrane, vacuole | 93.01 | 96.11 |
| KRH33787 | Soybean | golgi, plasma membrane, vacuole | 83.87 | 85.25 |
| KRG90495 | Soybean | golgi, plasma membrane, vacuole | 83.87 | 85.25 |
| GSMUA_Achr1P24970_001 | Banana | golgi, plasma membrane, vacuole | 81.18 | 82.51 |
| VIT_14s0060g00830.t01 | Wine grape | golgi, plasma membrane, vacuole | 80.65 | 81.97 |
| GSMUA_Achr8P29900_001 | Banana | golgi, plasma membrane, vacuole | 79.57 | 80.87 |
| GSMUA_Achr2P07050_001 | Banana | golgi, plasma membrane, vacuole | 79.03 | 80.33 |
| KRG96705 | Soybean | golgi, plasma membrane, vacuole | 77.96 | 79.23 |
| Solyc06g073270.2.1 | Tomato | golgi, plasma membrane, vacuole | 77.96 | 79.23 |
| PGSC0003DMT400069186 | Potato | golgi, plasma membrane, vacuole | 77.42 | 78.69 |
| VIT_07s0005g01960.t01 | Wine grape | golgi, plasma membrane, vacuole | 67.74 | 76.36 |
| Zm00001d040734_P001 | Maize | golgi, plasma membrane, vacuole | 74.73 | 75.96 |
| EES00703 | Sorghum | golgi, plasma membrane, vacuole | 74.19 | 75.41 |
| KRH68422 | Soybean | endoplasmic reticulum, extracellular, vacuole | 46.24 | 74.78 |
| Zm00001d010824_P001 | Maize | plasma membrane | 73.12 | 74.32 |
| TraesCS1A01G106000.1 | Wheat | golgi | 74.19 | 74.19 |
| TraesCS1B01G128400.1 | Wheat | golgi, plasma membrane, vacuole | 74.19 | 74.19 |
| TraesCS1D01G109000.1 | Wheat | golgi, plasma membrane, vacuole | 74.19 | 74.19 |
| EES17764 | Sorghum | golgi, plasma membrane, vacuole | 72.58 | 73.77 |
| Os01t0331900-01 | Rice | golgi, plasma membrane, vacuole | 72.04 | 73.22 |
| Os05t0159100-01 | Rice | plasma membrane | 70.43 | 70.05 |
| HORVU1Hr1G023500.9 | Barley | golgi, mitochondrion, plasma membrane | 72.58 | 67.84 |
Protein Annotations
| MapMan:22.5.6.1 | EntrezGene:837454 | UniProt:A0A178WGW7 | ProteinID:AAD18099.1 | ProteinID:AEE28430.1 | EMBL:AK228273 |
| ArrayExpress:AT1G09330 | EnsemblPlantsGene:AT1G09330 | RefSeq:AT1G09330 | TAIR:AT1G09330 | RefSeq:AT1G09330-TAIR-G | EnsemblPlants:AT1G09330.1 |
| TAIR:AT1G09330.1 | EMBL:AY085379 | EMBL:BT004772 | GO:GO:0000139 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005794 | GO:GO:0005802 | GO:GO:0006810 |
| GO:GO:0007030 | GO:GO:0008150 | GO:GO:0009306 | GO:GO:0009653 | GO:GO:0009826 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0016192 | GO:GO:0030173 |
| GO:GO:0031901 | GO:GO:0040007 | RefSeq:NP_563842.1 | ProteinID:OAP17619.1 | PFAM:PF05832 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR13019 | PANTHER:PTHR13019:SF14 | UniProt:Q0WRM9 |
| UniProt:Q8LEK2 | TMHMM:TMhelix | InterPro:TVP23-like | UniParc:UPI000000C47A | SEG:seg | : |
Description
ECHGolgi apparatus membrane protein-like protein ECHIDNA [Source:UniProtKB/Swiss-Prot;Acc:Q8LEK2]
Coordinates
chr1:-:3012739..3015255
Molecular Weight (calculated)
21238.9 Da
IEP (calculated)
9.202
GRAVY (calculated)
0.475
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPNNQIQAP VENYANPRTC LFHVLFKGAA LAFYILSALF FNSFVIIFVV TVLLAALDFW VVKNVSGRIL VGLRWWNEIN DLGESVWKFE SLDQESLARM
101: NKKDSWLFWW TLYLAAAAWF ILGVFSLIRF QADYLLVVGV CLSLNVANII GFTKCKKDAK KQFQQFASQT IASRFQSTVQ SAFTLV
101: NKKDSWLFWW TLYLAAAAWF ILGVFSLIRF QADYLLVVGV CLSLNVANII GFTKCKKDAK KQFQQFASQT IASRFQSTVQ SAFTLV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.