Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES00703 | Sorghum | golgi, plasma membrane, vacuole | 98.91 | 98.91 |
| Os01t0331900-01 | Rice | golgi, plasma membrane, vacuole | 87.43 | 87.43 |
| Zm00001d010824_P001 | Maize | plasma membrane | 84.15 | 84.15 |
| KRG90495 | Soybean | golgi, plasma membrane, vacuole | 78.69 | 78.69 |
| KRH33787 | Soybean | golgi, plasma membrane, vacuole | 78.69 | 78.69 |
| CDY31098 | Canola | golgi, plasma membrane, vacuole | 76.5 | 77.78 |
| CDY32169 | Canola | golgi, plasma membrane, vacuole | 76.5 | 77.78 |
| CDY64777 | Canola | golgi, plasma membrane, vacuole | 76.5 | 77.78 |
| VIT_14s0060g00830.t01 | Wine grape | golgi, plasma membrane, vacuole | 77.6 | 77.6 |
| CDX94985 | Canola | golgi, plasma membrane, vacuole | 75.96 | 77.22 |
| CDX93510 | Canola | golgi, plasma membrane, vacuole | 75.41 | 76.67 |
| Bra030769.1-P | Field mustard | golgi, plasma membrane, vacuole | 76.5 | 76.5 |
| VIT_07s0005g01960.t01 | Wine grape | golgi, plasma membrane, vacuole | 68.85 | 76.36 |
| GSMUA_Achr8P29900_001 | Banana | golgi, plasma membrane, vacuole | 75.96 | 75.96 |
| KRG96705 | Soybean | golgi, plasma membrane, vacuole | 75.96 | 75.96 |
| Bra018566.1-P | Field mustard | golgi, plasma membrane, vacuole | 75.96 | 75.96 |
| GSMUA_Achr2P07050_001 | Banana | golgi, plasma membrane, vacuole | 75.41 | 75.41 |
| GSMUA_Achr1P24970_001 | Banana | golgi, plasma membrane, vacuole | 75.41 | 75.41 |
| AT1G09330.1 | Thale cress | golgi, plasma membrane, vacuole | 75.96 | 74.73 |
| PGSC0003DMT400069186 | Potato | golgi, plasma membrane, vacuole | 73.77 | 73.77 |
| Solyc06g073270.2.1 | Tomato | golgi, plasma membrane, vacuole | 73.77 | 73.77 |
| KRH68422 | Soybean | endoplasmic reticulum, extracellular, vacuole | 44.81 | 71.3 |
Protein Annotations
| EMBL:BT036296 | EnsemblPlants:Zm00001d040734_P001 | EnsemblPlants:Zm00001d040734_T001 | EnsemblPlantsGene:Zm00001d040734 | EntrezGene:100193911 | GO:GO:0000139 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:TVP23-like | PANTHER:PTHR13019 | PANTHER:PTHR13019:SF14 | PFAM:PF05832 | ProteinID:ONM31898.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI00017B6F9A | UniProt:B4FGQ8 | MapMan:22.5.6.1 | : |
Description
Golgi apparatus membrane protein-like protein ECHIDNA
Coordinates
chr3:+:60728812..60733163
Molecular Weight (calculated)
20783.3 Da
IEP (calculated)
8.319
GRAVY (calculated)
0.475
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTQQEVTEN YANPKTCFFH VLFKASALAF YILSTLFVNN FVIIFVITVL LAALDFWVVK NVSGRILVGL RWWNEINDEG ESVWKFECLD GESLARMNKK
101: DSWLFWWTLY LAAAAWIILG IFSLIRLQAD YLLVVGVCLS LSIANIIGFT KCNKDAKKNI QDWTRSALLS GSVRSHLQSA FGV
101: DSWLFWWTLY LAAAAWIILG IFSLIRLQAD YLLVVGVCLS LSIANIIGFT KCNKDAKKNI QDWTRSALLS GSVRSHLQSA FGV
001: MDPNNQIQAP VENYANPRTC LFHVLFKGAA LAFYILSALF FNSFVIIFVV TVLLAALDFW VVKNVSGRIL VGLRWWNEIN DLGESVWKFE SLDQESLARM
101: NKKDSWLFWW TLYLAAAAWF ILGVFSLIRF QADYLLVVGV CLSLNVANII GFTKCKKDAK KQFQQFASQT IASRFQSTVQ SAFTLV
101: NKKDSWLFWW TLYLAAAAWF ILGVFSLIRF QADYLLVVGV CLSLNVANII GFTKCKKDAK KQFQQFASQT IASRFQSTVQ SAFTLV
Arabidopsis Description
ECHGolgi apparatus membrane protein-like protein ECHIDNA [Source:UniProtKB/Swiss-Prot;Acc:Q8LEK2]
SUBAcon: [plasma membrane,golgi,vacuole]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.