Subcellular Localization
min:
: max
Winner_takes_all: golgi, plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- golgi 3
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G09330.1 | KRH22653 | AT5G22290.1 | 21798944 |
| AT1G09330.1 | KRH26664 | AT5G22290.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH33787 | Soybean | golgi, plasma membrane, vacuole | 89.07 | 89.07 |
| KRG90495 | Soybean | golgi, plasma membrane, vacuole | 88.52 | 88.52 |
| KRH68422 | Soybean | endoplasmic reticulum, extracellular, vacuole | 53.55 | 85.22 |
| GSMUA_Achr1P24970_001 | Banana | golgi, plasma membrane, vacuole | 82.51 | 82.51 |
| PGSC0003DMT400069186 | Potato | golgi, plasma membrane, vacuole | 80.87 | 80.87 |
| Solyc06g073270.2.1 | Tomato | golgi, plasma membrane, vacuole | 80.87 | 80.87 |
| VIT_14s0060g00830.t01 | Wine grape | golgi, plasma membrane, vacuole | 80.87 | 80.87 |
| CDY32169 | Canola | golgi, plasma membrane, vacuole | 79.23 | 80.56 |
| CDX94985 | Canola | golgi, plasma membrane, vacuole | 79.23 | 80.56 |
| Bra018566.1-P | Field mustard | golgi, plasma membrane, vacuole | 80.33 | 80.33 |
| CDY31098 | Canola | golgi, plasma membrane, vacuole | 78.69 | 80.0 |
| CDX93510 | Canola | golgi, plasma membrane, vacuole | 78.69 | 80.0 |
| GSMUA_Achr2P07050_001 | Banana | golgi, plasma membrane, vacuole | 79.78 | 79.78 |
| Bra030769.1-P | Field mustard | golgi, plasma membrane, vacuole | 79.78 | 79.78 |
| CDY64777 | Canola | golgi, plasma membrane, vacuole | 78.14 | 79.44 |
| GSMUA_Achr8P29900_001 | Banana | golgi, plasma membrane, vacuole | 79.23 | 79.23 |
| AT1G09330.1 | Thale cress | golgi, plasma membrane, vacuole | 79.23 | 77.96 |
| EES00703 | Sorghum | golgi, plasma membrane, vacuole | 76.5 | 76.5 |
| Zm00001d010824_P001 | Maize | plasma membrane | 75.96 | 75.96 |
| Zm00001d040734_P001 | Maize | golgi, plasma membrane, vacuole | 75.96 | 75.96 |
| Os01t0331900-01 | Rice | golgi, plasma membrane, vacuole | 75.96 | 75.96 |
| EES17764 | Sorghum | golgi, plasma membrane, vacuole | 75.41 | 75.41 |
| TraesCS1A01G106000.1 | Wheat | golgi | 74.32 | 73.12 |
| TraesCS1B01G128400.1 | Wheat | golgi, plasma membrane, vacuole | 74.32 | 73.12 |
| TraesCS1D01G109000.1 | Wheat | golgi, plasma membrane, vacuole | 74.32 | 73.12 |
| Os05t0159100-01 | Rice | plasma membrane | 72.13 | 70.59 |
| HORVU1Hr1G023500.9 | Barley | golgi, mitochondrion, plasma membrane | 73.77 | 67.84 |
Protein Annotations
| MapMan:22.5.6.1 | EMBL:ACUP02012162 | EnsemblPlantsGene:GLYMA_19G227600 | GO:GO:0000139 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009306 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016192 | GO:GO:0030173 | UniProt:K7MZT3 |
| EnsemblPlants:KRG96705 | ProteinID:KRG96705 | ProteinID:KRG96705.1 | PFAM:PF05832 | PANTHER:PTHR13019 | PANTHER:PTHR13019:SF14 |
| TMHMM:TMhelix | InterPro:TVP23-like | UniParc:UPI000233E8AB | : | : | : |
Description
hypothetical protein
Coordinates
chr19:-:47896042..47899089
Molecular Weight (calculated)
20856.6 Da
IEP (calculated)
8.635
GRAVY (calculated)
0.581
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLGHPVGEN YANPNTCFFH VLFKAAALAF YILSALFIDN FVIIFVMTVL LAALDFWVVK NLSGRILVGL RWWNEINDLG ESVWKFESLD QQSLARMNKK
101: DSWLFWWTLY LTAVAWTMLA IFSLIRLQAD YLLVVGVCLT LCIANIVGFT ECQKNAKKRI QQFVSRTIAS RVSSTLQSAF SVV
101: DSWLFWWTLY LTAVAWTMLA IFSLIRLQAD YLLVVGVCLT LCIANIVGFT ECQKNAKKRI QQFVSRTIAS RVSSTLQSAF SVV
001: MDPNNQIQAP VENYANPRTC LFHVLFKGAA LAFYILSALF FNSFVIIFVV TVLLAALDFW VVKNVSGRIL VGLRWWNEIN DLGESVWKFE SLDQESLARM
101: NKKDSWLFWW TLYLAAAAWF ILGVFSLIRF QADYLLVVGV CLSLNVANII GFTKCKKDAK KQFQQFASQT IASRFQSTVQ SAFTLV
101: NKKDSWLFWW TLYLAAAAWF ILGVFSLIRF QADYLLVVGV CLSLNVANII GFTKCKKDAK KQFQQFASQT IASRFQSTVQ SAFTLV
Arabidopsis Description
ECHGolgi apparatus membrane protein-like protein ECHIDNA [Source:UniProtKB/Swiss-Prot;Acc:Q8LEK2]
SUBAcon: [golgi,plasma membrane,vacuole]
SUBAcon: [golgi,plasma membrane,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.