Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- golgi 4
- extracellular 2
- plasma membrane 3
- endoplasmic reticulum 2
- vacuole 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
28056797
|
msms PMID:
28056797
doi
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d010824_P001 | Maize | plasma membrane | 86.63 | 88.52 |
| EES17764 | Sorghum | golgi, plasma membrane, vacuole | 86.63 | 88.52 |
| TraesCS1D01G109000.1 | Wheat | golgi, plasma membrane, vacuole | 87.7 | 88.17 |
| TraesCS1B01G128400.1 | Wheat | golgi, plasma membrane, vacuole | 87.7 | 88.17 |
| TraesCS1A01G106000.1 | Wheat | golgi | 87.7 | 88.17 |
| Os01t0331900-01 | Rice | golgi, plasma membrane, vacuole | 80.21 | 81.97 |
| HORVU1Hr1G023500.9 | Barley | golgi, mitochondrion, plasma membrane | 87.17 | 81.91 |
| GSMUA_Achr1P24970_001 | Banana | golgi, plasma membrane, vacuole | 74.33 | 75.96 |
| KRG90495 | Soybean | golgi, plasma membrane, vacuole | 73.8 | 75.41 |
| KRH33787 | Soybean | golgi, plasma membrane, vacuole | 73.8 | 75.41 |
| GSMUA_Achr2P07050_001 | Banana | golgi, plasma membrane, vacuole | 72.73 | 74.32 |
| GSMUA_Achr8P29900_001 | Banana | golgi, plasma membrane, vacuole | 72.73 | 74.32 |
| PGSC0003DMT400069186 | Potato | golgi, plasma membrane, vacuole | 72.19 | 73.77 |
| Solyc06g073270.2.1 | Tomato | golgi, plasma membrane, vacuole | 72.19 | 73.77 |
| CDY64777 | Canola | golgi, plasma membrane, vacuole | 70.05 | 72.78 |
| CDY32169 | Canola | golgi, plasma membrane, vacuole | 70.05 | 72.78 |
| CDY31098 | Canola | golgi, plasma membrane, vacuole | 70.05 | 72.78 |
| CDX94985 | Canola | golgi, plasma membrane, vacuole | 70.05 | 72.78 |
| VIT_14s0060g00830.t01 | Wine grape | golgi, plasma membrane, vacuole | 71.12 | 72.68 |
| CDX93510 | Canola | golgi, plasma membrane, vacuole | 69.52 | 72.22 |
| KRG96705 | Soybean | golgi, plasma membrane, vacuole | 70.59 | 72.13 |
| VIT_07s0005g01960.t01 | Wine grape | golgi, plasma membrane, vacuole | 63.64 | 72.12 |
| Bra030769.1-P | Field mustard | golgi, plasma membrane, vacuole | 70.05 | 71.58 |
| Bra018566.1-P | Field mustard | golgi, plasma membrane, vacuole | 70.05 | 71.58 |
| AT1G09330.1 | Thale cress | golgi, plasma membrane, vacuole | 70.05 | 70.43 |
| KRH68422 | Soybean | endoplasmic reticulum, extracellular, vacuole | 41.71 | 67.83 |
Protein Annotations
| MapMan:22.5.6.1 | EntrezGene:4337877 | ProteinID:AAV43917.1 | EMBL:AK103137 | ProteinID:BAF16628.1 | ProteinID:BAS92389.1 |
| GO:GO:0000139 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009306 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016192 | GO:GO:0030173 | EnsemblPlantsGene:Os05g0159100 | EnsemblPlants:Os05t0159100-01 | PFAM:PF05832 | PANTHER:PTHR13019 |
| PANTHER:PTHR13019:SF14 | UniProt:Q5W723 | TMHMM:TMhelix | InterPro:TVP23-like | UniParc:UPI00004548A7 | RefSeq:XP_015637546.1 |
Description
Protein of unknown function DUF846, eukaryotic family protein. (Os05t0159100-01)
Coordinates
chr5:+:3489170..3492289
Molecular Weight (calculated)
21277.1 Da
IEP (calculated)
8.314
GRAVY (calculated)
0.565
Length
187 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRPQVVTEN YANPVTCLFH VLFKAGALVF YILFSLFVKS FVIIFVITVF LAALDFWVVK NVSGRILVGM RWWNEIDDEG NSVWKFECLD GEALARMNKK
101: DSWLFWWTLY LTAAAWIILG IFSLIRLEAD YLLVVGVCLT LSLANIVGFT RCNKDAKKNI RGYFEGHAQN AITSRITSTL QSAFGVI
101: DSWLFWWTLY LTAAAWIILG IFSLIRLEAD YLLVVGVCLT LSLANIVGFT RCNKDAKKNI RGYFEGHAQN AITSRITSTL QSAFGVI
001: MDPNNQIQAP VENYANPRTC LFHVLFKGAA LAFYILSALF FNSFVIIFVV TVLLAALDFW VVKNVSGRIL VGLRWWNEIN DLGESVWKFE SLDQESLARM
101: NKKDSWLFWW TLYLAAAAWF ILGVFSLIRF QADYLLVVGV CLSLNVANII GFTKCKKDAK KQFQQFASQT IASRFQSTVQ SAFTLV
101: NKKDSWLFWW TLYLAAAAWF ILGVFSLIRF QADYLLVVGV CLSLNVANII GFTKCKKDAK KQFQQFASQT IASRFQSTVQ SAFTLV
Arabidopsis Description
ECHGolgi apparatus membrane protein-like protein ECHIDNA [Source:UniProtKB/Swiss-Prot;Acc:Q8LEK2]
SUBAcon: [golgi,plasma membrane,vacuole]
SUBAcon: [golgi,plasma membrane,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.