Factsheet for Zm00001d026575_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, vacuole, mitochondrion, plastid, plasma membrane

Predictor Summary:

plastid 1
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 2
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, peroxisome, plasma membrane, plastid, vacuole
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
ChloroP:	plastid
MultiLoc:	peroxisome
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11624	Sorghum	plasma membrane	95.96	95.96
Zm00001d001901_P002	Maize	plasma membrane	91.92	91.92
Os04t0670000-01	Rice	plasma membrane	85.86	85.43
TraesCS2D01G545200.1	Wheat	plasma membrane	76.77	76.77
TraesCS2A01G544000.1	Wheat	plasma membrane	76.77	76.38
TraesCS2B01G574200.2	Wheat	plasma membrane	76.26	75.88
GSMUA_Achr7P05440_001	Banana	peroxisome, plasma membrane, vacuole	66.16	58.74
HORVU2Hr1G122310.2	Barley	cytosol, plasma membrane	51.01	54.3
VIT_03s0180g00170.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	54.04	51.69
KRG91024	Soybean	plasma membrane	52.02	50.49
PGSC0003DMT400066222	Potato	plasma membrane	52.02	50.49
CDX99221	Canola	plasma membrane	48.99	47.78
KRH35738	Soybean	endoplasmic reticulum	48.99	47.55
CDY46172	Canola	plastid	48.48	47.52
Solyc01g107620.2.1	Tomato	plasma membrane	52.02	47.03
CDX82294	Canola	plastid	46.46	46.94
GSMUA_Achr4P20190_001	Banana	cytosol, plastid	66.16	46.45
Bra001748.1-P	Field mustard	plastid	45.96	46.43
CDY22971	Canola	plasma membrane	44.95	45.41
CDY22970	Canola	plasma membrane	44.44	44.9
AT2G15280.1	Thale cress	plasma membrane	42.42	41.79
AT3G19460.3	Thale cress	plasma membrane	47.98	40.6
Bra022426.1-P	Field mustard	cytosol, plasma membrane, plastid	47.98	38.93
CDX71213	Canola	plasma membrane	37.88	36.95
CDY48222	Canola	cytosol, endoplasmic reticulum, plasma membrane	37.37	36.45
Bra040612.1-P	Field mustard	plasma membrane	33.33	36.07
Zm00001d020729_P001	Maize	plasma membrane	16.16	33.68
Zm00001d047517_P001	Maize	peroxisome	37.37	32.46
Zm00001d042846_P001	Maize	plasma membrane	32.32	30.48
Zm00001d016041_P001	Maize	extracellular	34.85	30.0
Zm00001d038910_P001	Maize	plasma membrane	33.84	29.52
Zm00001d039213_P001	Maize	golgi, plasma membrane, plastid	33.33	28.21
Zm00001d037453_P001	Maize	cytosol, peroxisome, plasma membrane	36.36	27.59
Zm00001d038768_P001	Maize	extracellular, mitochondrion	35.35	27.56
Zm00001d043551_P003	Maize	plasma membrane	35.35	27.24
Zm00001d037848_P008	Maize	endoplasmic reticulum, nucleus, peroxisome	34.34	26.98
Zm00001d020229_P001	Maize	plasma membrane	20.71	26.97
Zm00001d011631_P001	Maize	golgi, peroxisome, plasma membrane	29.8	26.7
Zm00001d012776_P001	Maize	extracellular	33.84	26.48
Zm00001d018781_P001	Maize	extracellular, mitochondrion	32.32	26.34
Zm00001d034313_P001	Maize	cytosol, nucleus, plasma membrane	32.83	26.21
Zm00001d008590_P001	Maize	plastid	16.67	24.81
Zm00001d008982_P001	Maize	cytosol, nucleus, plasma membrane	33.84	24.01
Zm00001d039316_P001	Maize	cytosol, nucleus, plasma membrane	33.33	21.57

Protein Annotations

EntrezGene:100283586	MapMan:13.7.2.1	ProteinID:AQK47109.1	UniProt:B6THS4	EMBL:BT066522	EMBL:EU964539
EMBL:EU965230	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0005789	GO:GO:0016020	GO:GO:0016021	InterPro:IPR003388	PFAM:PF02453	PFscan:PS50845
PANTHER:PTHR10994	PANTHER:PTHR10994:SF65	InterPro:Reticulon	TMHMM:TMhelix	UniParc:UPI000182DF18	EnsemblPlantsGene:Zm00001d026575
EnsemblPlants:Zm00001d026575_P001	EnsemblPlants:Zm00001d026575_T001	SEG:seg	:	:	:

Description

Reticulon-like protein B11

Coordinates

chr10:+:148249658..148253209

Molecular Weight (calculated)

21864.2 Da

IEP (calculated)

10.499

GRAVY (calculated)

0.549

Length

198 amino acids

Sequence
(BLAST)

001: MATGPRSLHA LLGGGAVADL LLWRRRNASA AAVVGATTVW FVFERAGYSF PSVLSNALLL LVAILFFWAK SASLLNRPLP PLPNLEVSDA IVEKAANHAL
101: VWINRLLAVG HDIAIKRDRK VFIKVILILW VVSFIGMLFN FLTLIYIGVM LSLLVPPLYE KYQDQVDEKV GVAYSVLSRH IDTIITRAGQ SAKQKKTE

Best Arabidopsis Sequence Match ( AT3G19460.1 )
(BLAST)

001: MGDSVSSSSR VSVHQSLGAG SVADLLLWRN RTGAVILLIS STGFWFLFER AGYNLLSFVS NVLLLLVAIF FLWAKSATVL NRPLPPVPNM EIPEEFANKA
101: ADDLRVWINY VLSIASDITI ARNPIRLLQV SLVLWAISYV GTLINSLTLV YIGVLLSLSF PIVYEKYQDH IDEKVNSTSK FVRNISRKFP LPINKEKKHQ

Arabidopsis Description

Reticulon-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LL94]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.