CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH18296	Soybean	endoplasmic reticulum	85.35	86.62
KRG93809	Soybean	plastid	84.62	85.87
CDX67799	Canola	plasma membrane	80.22	81.41
CDX98378	Canola	plasma membrane	79.85	81.04
AT1G30890.1	Thale cress	cytosol, plasma membrane, plastid	79.49	80.67
Bra003379.1-P	Field mustard	plastid	80.22	80.51
AT3G59500.1	Thale cress	plasma membrane	79.12	80.3
PGSC0003DMT400048758	Potato	plastid	78.02	79.78
Bra039874.1-P	Field mustard	plastid	77.29	79.62
CDX89024	Canola	plasma membrane	77.29	79.32
Bra014538.1-P	Field mustard	plastid	77.29	79.32
CDY12450	Canola	plasma membrane	78.39	79.26
CDY52184	Canola	plastid	78.39	79.26
PGSC0003DMT400051743	Potato	plastid	78.02	79.18
CDY00621	Canola	plastid	76.19	79.09
Solyc06g083630.2.1	Tomato	plastid	78.02	72.7
GSMUA_Achr5P15070_001	Banana	cytosol, plasma membrane, plastid	69.96	71.27
GSMUA_Achr4P22340_001	Banana	cytosol, plasma membrane, plastid	68.5	70.04
VIT_05s0102g00730.t01	Wine grape	endoplasmic reticulum, plasma membrane	83.15	67.36
KRH01468	Soybean	plasma membrane	96.34	67.26
HORVU6Hr1G034030.2	Barley	cytosol, plasma membrane, plastid	64.1	65.54
TraesCS6D01G156600.1	Wheat	cytosol, plasma membrane, plastid	64.1	65.54
TraesCS6A01G167600.1	Wheat	cytosol, plasma membrane, plastid	64.1	65.54
TraesCS6B01G195300.1	Wheat	cytosol, plasma membrane, plastid	63.74	65.17
Bra007455.1-P	Field mustard	cytosol, golgi, mitochondrion, plasma membrane	43.96	64.52
KXG24074	Sorghum	plasma membrane	62.64	64.04
Os06t0620600-01	Rice	cytosol, plasma membrane, plastid	62.27	63.67
Zm00001d041267_P001	Maize	cytosol, plasma membrane, plastid, vacuole	61.9	63.3
EES04687	Sorghum	cytosol, plasma membrane, plastid	61.9	63.3
TraesCS7B01G300300.1	Wheat	plasma membrane	61.54	62.92
TraesCS7A01G400200.1	Wheat	plasma membrane	61.54	62.92
TraesCS2A01G001100.1	Wheat	plasma membrane	58.61	62.75
TraesCS2D01G001300.1	Wheat	plasma membrane	58.61	62.75
Zm00001d012393_P004	Maize	extracellular	61.9	62.59
TraesCS7D01G394000.1	Wheat	plasma membrane	61.17	62.55
TraesCS2D01G595700.1	Wheat	plasma membrane	55.31	62.4
EER93147	Sorghum	cytosol, plasma membrane, plastid	60.81	62.17
Os04t0165400-01	Rice	cytosol	63.37	61.79
CDX71903	Canola	plastid	38.46	61.76
TraesCS2B01G022800.1	Wheat	plasma membrane	60.44	61.34
Solyc09g063020.2.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	77.29	61.34
HORVU1Hr1G028870.1	Barley	plastid	34.07	60.39
CDY05995	Canola	plasma membrane	39.56	59.34
HORVU7Hr1G094050.2	Barley	cytosol	25.64	53.03
Zm00001d053686_P001	Maize	cytosol	62.27	51.67
HORVU7Hr1G094010.8	Barley	mitochondrion	61.9	49.85

Protein Annotations

EntrezGene:100799996	MapMan:35.2	EMBL:ACUP02005003	EnsemblPlantsGene:GLYMA_08G256100	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0005793	GO:GO:0005794
GO:GO:0006810	GO:GO:0006888	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0030134
GO:GO:0030173	UniProt:I1KWP1	EnsemblPlants:KRH45179	ProteinID:KRH45179	ProteinID:KRH45179.1	PFAM:PF03878
PANTHER:PTHR14083	PANTHER:PTHR14083:SF6	TMHMM:TMhelix	UniParc:UPI000233810F	InterPro:Yif1_fam	SEG:seg

Description

hypothetical protein

Coordinates

chr8:-:22782959..22785798

Molecular Weight (calculated)

30688.7 Da

IEP (calculated)

9.505

GRAVY (calculated)

0.273

Length

273 amino acids

Sequence
(BLAST)

001: MYTNIGMPPG VPQHHPQPPM SSQPNLFGNA FNSSGSGLIR GGLGAYGEKI LGSSSEYVQS NISRYFSDPQ YYFQVNDHYV KNKLKVVLFP FLHRGHWTRI
101: TEPVGGRLSY KPPIYDINAP DLYIPLMAFG TYVVLAGISL GLRGKFSPEA LNWLFIKGLV GWFMQTALLK VTLLSLGSGE APLLDIIAYA GYTFPGLCLA
201: VSGRIIWSYS YYFLMLWTCL CMAVYLVKTM KRVLFAEVRS YDSSKHHYLL LLIALAQFPL FTWLGNITVN WLI

Best Arabidopsis Sequence Match ( AT1G30890.1 )
(BLAST)

001: MYNNMGPQPG MPRPPGNPEP GPFGNPFTGA GSGFIRGGLG AYGERILGSS SEYVQSNISR YFSDPQYYFQ VNDQYVRNKL KVVLFPFLHR GHWTRISEPV
101: GGRLSYKPPI YDINAPDLYI PFMAFGTYVV LAGLSLGLNG KFTPEALNWL FVKGLVGWFL QVMLLKVTLL SLGSGEAPLL DIVAYGGYAF AGLCLAGFAK
201: IMWGYSYYAL MPWTCLCTGI FLVKTMKRVL FAEVRSYDSS KHHYLLLFLA LVQFPLLIWL GNISVNWLL

Arabidopsis Description

Integral membrane HRF1 family protein [Source:UniProtKB/TrEMBL;Acc:Q94BQ9]
SUBAcon: [plasma membrane,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.