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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • mitochondrion 1
  • cytosol 2
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plasma membrane
iPSORT:mitochondrion
MultiLoc:cytosol
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7B01G300300.1 Wheat plasma membrane 79.55 39.33
EES04687 Sorghum cytosol, plasma membrane, plastid 75.0 37.08
Os06t0620600-01 Rice cytosol, plasma membrane, plastid 74.24 36.7
HORVU6Hr1G034030.2 Barley cytosol, plasma membrane, plastid 71.97 35.58
EER93147 Sorghum cytosol, plasma membrane, plastid 71.97 35.58
HORVU7Hr1G094010.8 Barley mitochondrion 81.06 31.56
Bra039874.1-P Field mustard plastid 58.33 29.06
AT1G30890.1 Thale cress cytosol, plasma membrane, plastid 58.33 28.62
Zm00001d053686_P001 Maize cytosol 71.21 28.57
CDY52184 Canola plastid 58.33 28.52
CDY00621 Canola plastid 56.82 28.52
Bra007455.1-P Field mustard cytosol, golgi, mitochondrion, plasma membrane 40.15 28.49
AT3G59500.1 Thale cress plasma membrane 56.82 27.88
KRH18296 Soybean endoplasmic reticulum 56.82 27.88
KRG93809 Soybean plastid 56.82 27.88
CDX89024 Canola plasma membrane 56.06 27.82
CDY12450 Canola plasma membrane 56.82 27.78
Bra014538.1-P Field mustard plastid 55.3 27.44
PGSC0003DMT400048758 Potato plastid 55.3 27.34
CDX67799 Canola plasma membrane 55.3 27.14
PGSC0003DMT400051743 Potato plastid 55.3 27.14
Bra003379.1-P Field mustard plastid 55.3 26.84
CDX98378 Canola plasma membrane 54.55 26.77
KRH45179 Soybean plastid 53.03 25.64
Solyc06g083630.2.1 Tomato plastid 55.3 24.91
CDY05995 Canola plasma membrane 33.33 24.18
CDX71903 Canola plastid 30.3 23.53
VIT_05s0102g00730.t01 Wine grape endoplasmic reticulum, plasma membrane 56.06 21.96
VIT_11s0037g00310.t01 Wine grape cytosol 44.7 21.69
Solyc07g005670.1.1 Tomato extracellular 43.94 21.32
Solyc09g063020.2.1 Tomato endoplasmic reticulum, plasma membrane, plastid 55.3 21.22
KRH01468 Soybean plasma membrane 53.79 18.16
HORVU1Hr1G028870.1 Barley plastid 3.79 3.25
PGSC0003DMT400091443 Potato cytosol 3.03 3.23
Protein Annotations
EnsemblPlants:HORVU7Hr1G094050.2EnsemblPlantsGene:HORVU7Hr1G094050GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:Yif1_fam
PANTHER:PTHR14083PANTHER:PTHR14083:SF6PFAM:PF03878TMHMM:TMhelixUniParc:UPI000B484FD6UniProt:A0A287XDX8
MapMan:35.2:::::
Description
No Description!
Coordinates
chrchr7H:-:573633134..573633722
Molecular Weight (calculated)
15512.4 Da
IEP (calculated)
10.350
GRAVY (calculated)
0.344
Length
132 amino acids
Sequence
(BLAST)
001: MERSAKFYPR CTDYTVHKRA LGWFMQVILI KTLLYSLGSG ESPLLDIVAY AGYGFAGTLL AMLVRIFWSY SYYFVMPWFC IRTGMFLVKT MKRVLQGASR
101: TYERRPSRNH YFLLFLAVVQ FPMLFWLGNI KA
Best Arabidopsis Sequence Match ( AT1G30890.1 )
(BLAST)
001: MYNNMGPQPG MPRPPGNPEP GPFGNPFTGA GSGFIRGGLG AYGERILGSS SEYVQSNISR YFSDPQYYFQ VNDQYVRNKL KVVLFPFLHR GHWTRISEPV
101: GGRLSYKPPI YDINAPDLYI PFMAFGTYVV LAGLSLGLNG KFTPEALNWL FVKGLVGWFL QVMLLKVTLL SLGSGEAPLL DIVAYGGYAF AGLCLAGFAK
201: IMWGYSYYAL MPWTCLCTGI FLVKTMKRVL FAEVRSYDSS KHHYLLLFLA LVQFPLLIWL GNISVNWLL
Arabidopsis Description
Integral membrane HRF1 family protein [Source:UniProtKB/TrEMBL;Acc:Q94BQ9]
SUBAcon: [plasma membrane,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.