Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039874.1-P | Field mustard | plastid | 98.15 | 100.0 |
| CDY12450 | Canola | plasma membrane | 98.52 | 98.52 |
| AT1G30890.1 | Thale cress | cytosol, plasma membrane, plastid | 95.56 | 95.91 |
| CDX67799 | Canola | plasma membrane | 87.04 | 87.36 |
| CDX98378 | Canola | plasma membrane | 86.67 | 86.99 |
| CDY00621 | Canola | plastid | 84.44 | 86.69 |
| CDX89024 | Canola | plasma membrane | 84.44 | 85.71 |
| PGSC0003DMT400051743 | Potato | plastid | 81.48 | 81.78 |
| PGSC0003DMT400048758 | Potato | plastid | 80.37 | 81.27 |
| KRH18296 | Soybean | endoplasmic reticulum | 79.26 | 79.55 |
| KRG93809 | Soybean | plastid | 78.52 | 78.81 |
| KRH45179 | Soybean | plastid | 79.26 | 78.39 |
| Solyc06g083630.2.1 | Tomato | plastid | 81.11 | 74.74 |
| GSMUA_Achr5P15070_001 | Banana | cytosol, plasma membrane, plastid | 72.22 | 72.76 |
| GSMUA_Achr4P22340_001 | Banana | cytosol, plasma membrane, plastid | 71.48 | 72.28 |
| CDX71903 | Canola | plastid | 42.96 | 68.24 |
| TraesCS6D01G156600.1 | Wheat | cytosol, plasma membrane, plastid | 67.41 | 68.16 |
| HORVU6Hr1G034030.2 | Barley | cytosol, plasma membrane, plastid | 67.41 | 68.16 |
| TraesCS6A01G167600.1 | Wheat | cytosol, plasma membrane, plastid | 67.41 | 68.16 |
| TraesCS6B01G195300.1 | Wheat | cytosol, plasma membrane, plastid | 67.04 | 67.79 |
| TraesCS2D01G001300.1 | Wheat | plasma membrane | 63.7 | 67.45 |
| TraesCS2A01G001100.1 | Wheat | plasma membrane | 63.7 | 67.45 |
| EES04687 | Sorghum | cytosol, plasma membrane, plastid | 65.93 | 66.67 |
| VIT_05s0102g00730.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 82.96 | 66.47 |
| KXG24074 | Sorghum | plasma membrane | 65.56 | 66.29 |
| TraesCS2D01G595700.1 | Wheat | plasma membrane | 59.26 | 66.12 |
| Os04t0165400-01 | Rice | cytosol | 68.52 | 66.07 |
| Zm00001d041267_P001 | Maize | cytosol, plasma membrane, plastid, vacuole | 65.19 | 65.92 |
| Os06t0620600-01 | Rice | cytosol, plasma membrane, plastid | 65.19 | 65.92 |
| EER93147 | Sorghum | cytosol, plasma membrane, plastid | 65.19 | 65.92 |
| Zm00001d012393_P004 | Maize | extracellular | 65.56 | 65.56 |
| TraesCS2B01G022800.1 | Wheat | plasma membrane | 65.19 | 65.43 |
| CDY05995 | Canola | plasma membrane | 44.07 | 65.38 |
| TraesCS7A01G400200.1 | Wheat | plasma membrane | 62.96 | 63.67 |
| TraesCS7B01G300300.1 | Wheat | plasma membrane | 62.96 | 63.67 |
| TraesCS7D01G394000.1 | Wheat | plasma membrane | 62.59 | 63.3 |
| Solyc09g063020.2.1 | Tomato | endoplasmic reticulum, plasma membrane, plastid | 80.0 | 62.79 |
| HORVU1Hr1G028870.1 | Barley | plastid | 34.07 | 59.74 |
| HORVU7Hr1G094050.2 | Barley | cytosol | 28.52 | 58.33 |
| KRH01468 | Soybean | plasma membrane | 78.89 | 54.48 |
| Zm00001d053686_P001 | Maize | cytosol | 65.93 | 54.1 |
| HORVU7Hr1G094010.8 | Barley | mitochondrion | 63.33 | 50.44 |
Protein Annotations
| EnsemblPlants:CDY52184 | EnsemblPlantsGene:GSBRNA2T00005040001 | GO:A0A078IRW0 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Yif1_fam | PANTHER:PTHR14083 | PANTHER:PTHR14083:SF6 | PFAM:PF03878 | ProteinID:CDY52184 | ProteinID:CDY52184.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EED877 | UniProt:A0A078IRW0 | MapMan:35.2 | : |
Description
BnaAnng11250DBnaAnng11250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IRW0]
Coordinates
chrLK033063:-:49114..50552
Molecular Weight (calculated)
30246.1 Da
IEP (calculated)
9.539
GRAVY (calculated)
0.253
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MYNNNMGPQQ GMPRPPGNPQ PGPFGNPFTG PASGFIRGGL GAYGERILGS SSEYVQSNIT RYFSDPQYYF QVNDQYVRNK LKVVLFPFLH RGHWARISEP
101: VGGRLSYKPP IYDINAPDLY IPFMAFGTYV VLAGLSLGLN GKFSPEALNW LFVKGLVGWF LQVMLLKVTL LSLGSAEAPL LDIVAYGGYA FAGLCLAGFA
201: KIMWGYSYYA LMPWTCLCTG VFLVKTMKRV LFAEVRSYDS SRHHYLLLFL ALVQFPLLIW LGNISVNWLF
101: VGGRLSYKPP IYDINAPDLY IPFMAFGTYV VLAGLSLGLN GKFSPEALNW LFVKGLVGWF LQVMLLKVTL LSLGSAEAPL LDIVAYGGYA FAGLCLAGFA
201: KIMWGYSYYA LMPWTCLCTG VFLVKTMKRV LFAEVRSYDS SRHHYLLLFL ALVQFPLLIW LGNISVNWLF
001: MYNNMGPQPG MPRPPGNPEP GPFGNPFTGA GSGFIRGGLG AYGERILGSS SEYVQSNISR YFSDPQYYFQ VNDQYVRNKL KVVLFPFLHR GHWTRISEPV
101: GGRLSYKPPI YDINAPDLYI PFMAFGTYVV LAGLSLGLNG KFTPEALNWL FVKGLVGWFL QVMLLKVTLL SLGSGEAPLL DIVAYGGYAF AGLCLAGFAK
201: IMWGYSYYAL MPWTCLCTGI FLVKTMKRVL FAEVRSYDSS KHHYLLLFLA LVQFPLLIWL GNISVNWLL
101: GGRLSYKPPI YDINAPDLYI PFMAFGTYVV LAGLSLGLNG KFTPEALNWL FVKGLVGWFL QVMLLKVTLL SLGSGEAPLL DIVAYGGYAF AGLCLAGFAK
201: IMWGYSYYAL MPWTCLCTGI FLVKTMKRVL FAEVRSYDSS KHHYLLLFLA LVQFPLLIWL GNISVNWLL
Arabidopsis Description
Integral membrane HRF1 family protein [Source:UniProtKB/TrEMBL;Acc:Q94BQ9]
SUBAcon: [plasma membrane,plastid,cytosol]
SUBAcon: [plasma membrane,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.