Factsheet for HORVU1Hr1G028870.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400091443	Potato	cytosol	50.0	62.1
TraesCS7D01G394000.1	Wheat	plasma membrane	88.31	50.94
TraesCS7A01G400200.1	Wheat	plasma membrane	87.66	50.56
Os06t0620600-01	Rice	cytosol, plasma membrane, plastid	80.52	46.44
HORVU6Hr1G034030.2	Barley	cytosol, plasma membrane, plastid	77.27	44.57
EES04687	Sorghum	cytosol, plasma membrane, plastid	77.27	44.57
EER93147	Sorghum	cytosol, plasma membrane, plastid	74.03	42.7
HORVU7Hr1G094010.8	Barley	mitochondrion	88.31	40.12
AT1G30890.1	Thale cress	cytosol, plasma membrane, plastid	61.69	35.32
PGSC0003DMT400051743	Potato	plastid	61.69	35.32
CDX98378	Canola	plasma membrane	61.69	35.32
Bra003379.1-P	Field mustard	plastid	62.34	35.29
CDX67799	Canola	plasma membrane	61.04	34.94
PGSC0003DMT400048758	Potato	plastid	60.39	34.83
KRH18296	Soybean	endoplasmic reticulum	60.39	34.57
Zm00001d053686_P001	Maize	cytosol	73.38	34.35
Bra039874.1-P	Field mustard	plastid	59.09	34.34
Bra014538.1-P	Field mustard	plastid	59.09	34.21
CDX89024	Canola	plasma membrane	59.09	34.21
AT3G59500.1	Thale cress	plasma membrane	59.74	34.2
KRG93809	Soybean	plastid	59.74	34.2
CDY12450	Canola	plasma membrane	59.74	34.07
CDY52184	Canola	plastid	59.74	34.07
KRH45179	Soybean	plastid	60.39	34.07
CDY00621	Canola	plastid	57.79	33.84
Solyc06g083630.2.1	Tomato	plastid	62.34	32.76
VIT_11s0037g00310.t01	Wine grape	cytosol	54.55	30.88
CDY05995	Canola	plasma membrane	35.71	30.22
Solyc07g005670.1.1	Tomato	extracellular	52.6	29.78
Bra007455.1-P	Field mustard	cytosol, golgi, mitochondrion, plasma membrane	33.77	27.96
VIT_05s0102g00730.t01	Wine grape	endoplasmic reticulum, plasma membrane	61.04	27.89
CDX71903	Canola	plastid	30.52	27.65
Solyc09g063020.2.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	61.69	27.62
KRH01468	Soybean	plasma membrane	61.04	24.04
HORVU7Hr1G094050.2	Barley	cytosol	3.25	3.79

Protein Annotations

EnsemblPlants:HORVU1Hr1G028870.1	EnsemblPlantsGene:HORVU1Hr1G028870	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:Yif1_fam
PANTHER:PTHR14083	PANTHER:PTHR14083:SF6	PFAM:PF03878	TMHMM:TMhelix	UniParc:UPI000B463DFA	UniProt:A0A287F0T7
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:159469269..159470186

Molecular Weight (calculated)

17179.8 Da

IEP (calculated)

9.626

GRAVY (calculated)

0.022

Length

154 amino acids

Sequence
(BLAST)

001: MAVMNIDMGG LAGRPTTSQV DPFQSALYGA GPGLIRSGLG AYSEKFLGSS SDFMQSNIAQ YLSNPQYYFQ VNNQYVWNKL KVVLFPFLHR GHWTRTTELV
101: GGRLSYKPPV QDINAPDMYI PLMAFTTYIV VAGYALGVLG RKLHSQNNFL LLYL

Best Arabidopsis Sequence Match ( AT1G30890.1 )
(BLAST)

001: MYNNMGPQPG MPRPPGNPEP GPFGNPFTGA GSGFIRGGLG AYGERILGSS SEYVQSNISR YFSDPQYYFQ VNDQYVRNKL KVVLFPFLHR GHWTRISEPV
101: GGRLSYKPPI YDINAPDLYI PFMAFGTYVV LAGLSLGLNG KFTPEALNWL FVKGLVGWFL QVMLLKVTLL SLGSGEAPLL DIVAYGGYAF AGLCLAGFAK
201: IMWGYSYYAL MPWTCLCTGI FLVKTMKRVL FAEVRSYDSS KHHYLLLFLA LVQFPLLIWL GNISVNWLL

Arabidopsis Description

Integral membrane HRF1 family protein [Source:UniProtKB/TrEMBL;Acc:Q94BQ9]
SUBAcon: [plasma membrane,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.