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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, plasma membrane, plastid
BaCelLo:plastid
MultiLoc:plasma membrane
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra007455.1-P Field mustard cytosol, golgi, mitochondrion, plasma membrane 82.42 80.65
AT3G59500.1 Thale cress plasma membrane 69.78 47.21
CDY00621 Canola plastid 68.13 47.15
CDX89024 Canola plasma membrane 67.58 46.24
CDX67799 Canola plasma membrane 68.13 46.1
CDX98378 Canola plasma membrane 67.58 45.72
CDY52184 Canola plastid 65.38 44.07
CDY12450 Canola plasma membrane 64.29 43.33
KRH18296 Soybean endoplasmic reticulum 62.09 42.01
PGSC0003DMT400048758 Potato plastid 61.54 41.95
KRG93809 Soybean plastid 61.54 41.64
PGSC0003DMT400051743 Potato plastid 59.34 40.15
KRH45179 Soybean plastid 59.34 39.56
HORVU6Hr1G034030.2 Barley cytosol, plasma membrane, plastid 56.59 38.58
GSMUA_Achr5P15070_001 Banana cytosol, plasma membrane, plastid 56.59 38.43
TraesCS6A01G167600.1 Wheat cytosol, plasma membrane, plastid 56.04 38.2
TraesCS6D01G156600.1 Wheat cytosol, plasma membrane, plastid 56.04 38.2
KXG24074 Sorghum plasma membrane 56.04 38.2
GSMUA_Achr4P22340_001 Banana cytosol, plasma membrane, plastid 56.04 38.2
TraesCS6B01G195300.1 Wheat cytosol, plasma membrane, plastid 55.49 37.83
TraesCS7B01G300300.1 Wheat plasma membrane 55.49 37.83
TraesCS2D01G001300.1 Wheat plasma membrane 52.75 37.65
TraesCS2A01G001100.1 Wheat plasma membrane 52.75 37.65
TraesCS7A01G400200.1 Wheat plasma membrane 54.95 37.45
EES04687 Sorghum cytosol, plasma membrane, plastid 54.95 37.45
TraesCS7D01G394000.1 Wheat plasma membrane 54.95 37.45
Zm00001d041267_P001 Maize cytosol, plasma membrane, plastid, vacuole 54.4 37.08
Os06t0620600-01 Rice cytosol, plasma membrane, plastid 54.4 37.08
Solyc06g083630.2.1 Tomato plastid 59.34 36.86
EER93147 Sorghum cytosol, plasma membrane, plastid 53.85 36.7
Zm00001d012393_P004 Maize extracellular 53.85 36.3
HORVU1Hr1G028870.1 Barley plastid 30.22 35.71
TraesCS2B01G022800.1 Wheat plasma membrane 52.75 35.69
Os04t0165400-01 Rice cytosol 54.4 35.36
HORVU7Hr1G094050.2 Barley cytosol 24.18 33.33
TraesCS2D01G595700.1 Wheat plasma membrane 43.96 33.06
CDX71903 Canola plastid 30.77 32.94
Solyc09g063020.2.1 Tomato endoplasmic reticulum, plasma membrane, plastid 61.54 32.56
VIT_05s0102g00730.t01 Wine grape endoplasmic reticulum, plasma membrane 59.89 32.34
Zm00001d053686_P001 Maize cytosol 56.04 31.0
HORVU7Hr1G094010.8 Barley mitochondrion 54.95 29.5
KRH01468 Soybean plasma membrane 58.79 27.37
Protein Annotations
EnsemblPlants:CDY05995EnsemblPlantsGene:GSBRNA2T00121838001GO:A0A078EVC1InterPro:Yif1_famPANTHER:PTHR14083PANTHER:PTHR14083:SF6
PFAM:PF03878ProteinID:CDY05995ProteinID:CDY05995.1SEG:segTMHMM:TMhelixUniParc:UPI0004EF2B4D
MapMan:35.2:::::
Description
BnaA09g37850D
Coordinates
chrLK031967:-:150119..151210
Molecular Weight (calculated)
20694.8 Da
IEP (calculated)
8.680
GRAVY (calculated)
0.520
Length
182 amino acids
Sequence
(BLAST)
001: MNSYQWRELT RSGFTKMNDQ YVRNKLKIVL LPFLHRGHWT RISEPIEGRL SYKPPIYDIN APDLYIPLMA FGTYLVLDVL SLGLCGKNGW LFFLQVMLLE
101: ITLLSLGRGE SPLLDIVAYA GYANAGLCLA VLCKTIWGYS YYVLIPWTCL CTGVFLVSEF SLLKLGFPLL ILLGNISVNR LF
Best Arabidopsis Sequence Match ( AT1G30890.1 )
(BLAST)
001: MYNNMGPQPG MPRPPGNPEP GPFGNPFTGA GSGFIRGGLG AYGERILGSS SEYVQSNISR YFSDPQYYFQ VNDQYVRNKL KVVLFPFLHR GHWTRISEPV
101: GGRLSYKPPI YDINAPDLYI PFMAFGTYVV LAGLSLGLNG KFTPEALNWL FVKGLVGWFL QVMLLKVTLL SLGSGEAPLL DIVAYGGYAF AGLCLAGFAK
201: IMWGYSYYAL MPWTCLCTGI FLVKTMKRVL FAEVRSYDSS KHHYLLLFLA LVQFPLLIWL GNISVNWLL
Arabidopsis Description
Integral membrane HRF1 family protein [Source:UniProtKB/TrEMBL;Acc:Q94BQ9]
SUBAcon: [plasma membrane,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.